2024-07-27 03:05:55,061 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 03:05:55,374 Running on GPU 2024-07-27 03:05:59,109 Found 6 citations for tools or databases 2024-07-27 03:05:59,110 Query 1/1: NDUFV3_FBXW9 (length 931) 2024-07-27 03:05:59,581 Sleeping for 7s. Reason: PENDING 2024-07-27 03:06:07,001 Sleeping for 6s. Reason: RUNNING 2024-07-27 03:06:13,416 Sleeping for 8s. Reason: RUNNING 2024-07-27 03:06:21,844 Sleeping for 10s. Reason: RUNNING 2024-07-27 03:06:32,269 Sleeping for 9s. Reason: RUNNING 2024-07-27 03:06:41,702 Sleeping for 9s. Reason: RUNNING 2024-07-27 03:06:51,143 Sleeping for 7s. Reason: RUNNING 2024-07-27 03:06:58,572 Sleeping for 10s. Reason: RUNNING 2024-07-27 03:07:09,013 Sleeping for 8s. Reason: RUNNING 2024-07-27 03:07:17,457 Sleeping for 7s. Reason: RUNNING 2024-07-27 03:07:24,897 Sleeping for 6s. Reason: RUNNING 2024-07-27 03:07:31,316 Sleeping for 7s. Reason: RUNNING 2024-07-27 03:07:38,756 Sleeping for 10s. Reason: RUNNING 2024-07-27 03:07:49,190 Sleeping for 5s. Reason: RUNNING 2024-07-27 03:07:54,609 Sleeping for 10s. Reason: RUNNING 2024-07-27 03:08:05,031 Sleeping for 5s. Reason: RUNNING 2024-07-27 03:08:10,454 Sleeping for 5s. Reason: RUNNING 2024-07-27 03:08:15,913 Sleeping for 10s. Reason: RUNNING 2024-07-27 03:08:27,762 Sleeping for 10s. Reason: PENDING 2024-07-27 03:08:38,213 Sleeping for 8s. Reason: RUNNING 2024-07-27 03:08:46,664 Sleeping for 7s. Reason: RUNNING 2024-07-27 03:08:54,091 Sleeping for 8s. Reason: RUNNING 2024-07-27 03:09:02,514 Sleeping for 8s. Reason: RUNNING 2024-07-27 03:09:10,943 Sleeping for 10s. Reason: RUNNING 2024-07-27 03:09:21,359 Sleeping for 6s. Reason: RUNNING 2024-07-27 03:09:27,776 Sleeping for 9s. Reason: RUNNING 2024-07-27 03:09:37,197 Sleeping for 9s. Reason: RUNNING 2024-07-27 03:09:48,338 Setting max_seq=508, max_extra_seq=2048 2024-07-27 03:13:09,860 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.9 pTM=0.458 ipTM=0.153 2024-07-27 03:13:28,293 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.5 pTM=0.458 ipTM=0.146 tol=17.5 2024-07-27 03:13:46,740 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.8 pTM=0.458 ipTM=0.133 tol=7.59 2024-07-27 03:14:05,250 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.9 pTM=0.459 ipTM=0.146 tol=4.64 2024-07-27 03:14:23,780 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49 pTM=0.46 ipTM=0.142 tol=3.26 2024-07-27 03:14:42,351 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.1 pTM=0.461 ipTM=0.142 tol=2.42 2024-07-27 03:15:00,940 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49 pTM=0.46 ipTM=0.139 tol=3.44 2024-07-27 03:15:19,541 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.2 pTM=0.46 ipTM=0.135 tol=2.55 2024-07-27 03:15:38,171 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.1 pTM=0.459 ipTM=0.135 tol=2.58 2024-07-27 03:15:56,818 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.1 pTM=0.459 ipTM=0.139 tol=2.91 2024-07-27 03:16:15,477 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.2 pTM=0.46 ipTM=0.139 tol=4.52 2024-07-27 03:16:34,111 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.3 pTM=0.46 ipTM=0.146 tol=3.91 2024-07-27 03:16:52,780 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.3 pTM=0.459 ipTM=0.14 tol=2.12 2024-07-27 03:17:11,455 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.1 pTM=0.458 ipTM=0.141 tol=1.56 2024-07-27 03:17:30,141 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.2 pTM=0.459 ipTM=0.138 tol=1.84 2024-07-27 03:17:48,836 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.1 pTM=0.461 ipTM=0.16 tol=1.91 2024-07-27 03:18:07,521 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.1 pTM=0.46 ipTM=0.143 tol=1.68 2024-07-27 03:18:26,223 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.1 pTM=0.462 ipTM=0.157 tol=1.81 2024-07-27 03:18:44,917 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.1 pTM=0.461 ipTM=0.155 tol=1.81 2024-07-27 03:19:03,613 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49 pTM=0.46 ipTM=0.151 tol=1.52 2024-07-27 03:19:22,288 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.9 pTM=0.461 ipTM=0.146 tol=1.97 2024-07-27 03:19:40,972 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49 pTM=0.46 ipTM=0.137 tol=2.34 2024-07-27 03:19:59,670 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.2 pTM=0.461 ipTM=0.151 tol=1.9 2024-07-27 03:20:18,359 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.1 pTM=0.46 ipTM=0.138 tol=1.77 2024-07-27 03:20:37,036 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49 pTM=0.46 ipTM=0.142 tol=2.57 2024-07-27 03:20:55,742 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.9 pTM=0.459 ipTM=0.14 tol=2.73 2024-07-27 03:21:14,425 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.9 pTM=0.459 ipTM=0.145 tol=2.79 2024-07-27 03:21:33,102 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49 pTM=0.459 ipTM=0.138 tol=2.5 2024-07-27 03:21:51,758 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.9 pTM=0.458 ipTM=0.138 tol=1.91 2024-07-27 03:22:10,432 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.1 pTM=0.459 ipTM=0.139 tol=2.18 2024-07-27 03:22:29,089 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.9 pTM=0.461 ipTM=0.149 tol=2.45 2024-07-27 03:22:29,090 alphafold2_multimer_v3_model_1_seed_000 took 755.4s (30 recycles) 2024-07-27 03:22:48,266 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.5 pTM=0.462 ipTM=0.157 2024-07-27 03:23:06,955 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.5 pTM=0.468 ipTM=0.152 tol=17.8 2024-07-27 03:23:25,666 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.7 pTM=0.466 ipTM=0.148 tol=11.8 2024-07-27 03:23:44,373 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.8 pTM=0.465 ipTM=0.14 tol=7.21 2024-07-27 03:24:03,086 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.7 pTM=0.464 ipTM=0.16 tol=4.96 2024-07-27 03:24:21,807 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.8 pTM=0.462 ipTM=0.147 tol=3.07 2024-07-27 03:24:40,536 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.6 pTM=0.461 ipTM=0.142 tol=4.2 2024-07-27 03:24:59,253 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.7 pTM=0.461 ipTM=0.134 tol=3.79 2024-07-27 03:25:17,975 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.6 pTM=0.46 ipTM=0.142 tol=3.5 2024-07-27 03:25:36,676 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.8 pTM=0.46 ipTM=0.141 tol=2.67 2024-07-27 03:25:55,418 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.8 pTM=0.46 ipTM=0.143 tol=3.09 2024-07-27 03:26:14,143 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.8 pTM=0.461 ipTM=0.147 tol=3.43 2024-07-27 03:26:32,840 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.8 pTM=0.459 ipTM=0.139 tol=4.12 2024-07-27 03:26:51,535 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.7 pTM=0.459 ipTM=0.138 tol=2.74 2024-07-27 03:27:10,268 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.8 pTM=0.46 ipTM=0.143 tol=3.6 2024-07-27 03:27:29,019 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.8 pTM=0.46 ipTM=0.139 tol=2.98 2024-07-27 03:27:47,747 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.8 pTM=0.46 ipTM=0.136 tol=1.82 2024-07-27 03:28:06,481 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.8 pTM=0.462 ipTM=0.142 tol=4.45 2024-07-27 03:28:25,217 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.8 pTM=0.461 ipTM=0.14 tol=2.47 2024-07-27 03:28:43,909 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.8 pTM=0.46 ipTM=0.137 tol=1.9 2024-07-27 03:29:02,657 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.8 pTM=0.461 ipTM=0.146 tol=2.49 2024-07-27 03:29:21,405 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.8 pTM=0.463 ipTM=0.148 tol=3.63 2024-07-27 03:29:40,149 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.9 pTM=0.461 ipTM=0.147 tol=2.72 2024-07-27 03:29:58,888 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.8 pTM=0.46 ipTM=0.148 tol=3.41 2024-07-27 03:30:17,604 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.7 pTM=0.461 ipTM=0.144 tol=2.84 2024-07-27 03:30:36,334 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.8 pTM=0.459 ipTM=0.133 tol=2.95 2024-07-27 03:30:55,075 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.6 pTM=0.46 ipTM=0.141 tol=2.74 2024-07-27 03:31:13,833 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.7 pTM=0.46 ipTM=0.135 tol=2.81 2024-07-27 03:31:32,547 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.7 pTM=0.459 ipTM=0.128 tol=2.74 2024-07-27 03:31:51,307 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.5 pTM=0.459 ipTM=0.129 tol=5.61 2024-07-27 03:32:10,044 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.7 pTM=0.461 ipTM=0.141 tol=4.87 2024-07-27 03:32:10,045 alphafold2_multimer_v3_model_2_seed_000 took 580.4s (30 recycles) 2024-07-27 03:32:29,314 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49 pTM=0.468 ipTM=0.149 2024-07-27 03:32:48,086 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.1 pTM=0.468 ipTM=0.155 tol=11.6 2024-07-27 03:33:06,874 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.5 pTM=0.466 ipTM=0.156 tol=5.77 2024-07-27 03:33:25,677 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.4 pTM=0.468 ipTM=0.145 tol=5.3 2024-07-27 03:33:44,484 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.6 pTM=0.47 ipTM=0.148 tol=6.65 2024-07-27 03:34:03,258 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.5 pTM=0.47 ipTM=0.183 tol=7.12 2024-07-27 03:34:22,046 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.5 pTM=0.468 ipTM=0.179 tol=4.01 2024-07-27 03:34:40,809 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.8 pTM=0.469 ipTM=0.193 tol=2.25 2024-07-27 03:34:59,600 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.8 pTM=0.469 ipTM=0.182 tol=2.2 2024-07-27 03:35:18,359 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.8 pTM=0.469 ipTM=0.183 tol=1.7 2024-07-27 03:35:37,137 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.8 pTM=0.468 ipTM=0.17 tol=1.31 2024-07-27 03:35:55,913 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.8 pTM=0.469 ipTM=0.174 tol=1.99 2024-07-27 03:36:14,687 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.8 pTM=0.47 ipTM=0.182 tol=2.2 2024-07-27 03:36:33,450 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.8 pTM=0.469 ipTM=0.185 tol=1.6 2024-07-27 03:36:52,218 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.9 pTM=0.47 ipTM=0.184 tol=2.03 2024-07-27 03:37:10,960 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.8 pTM=0.469 ipTM=0.183 tol=1.67 2024-07-27 03:37:29,721 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.8 pTM=0.47 ipTM=0.201 tol=1.77 2024-07-27 03:37:48,477 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.8 pTM=0.471 ipTM=0.18 tol=1.58 2024-07-27 03:38:07,248 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.9 pTM=0.471 ipTM=0.205 tol=1.8 2024-07-27 03:38:26,007 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.9 pTM=0.47 ipTM=0.184 tol=1.87 2024-07-27 03:38:44,793 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.9 pTM=0.471 ipTM=0.186 tol=1.7 2024-07-27 03:39:03,556 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.8 pTM=0.47 ipTM=0.189 tol=1.95 2024-07-27 03:39:22,316 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.8 pTM=0.471 ipTM=0.176 tol=2.04 2024-07-27 03:39:41,067 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.9 pTM=0.471 ipTM=0.184 tol=1.63 2024-07-27 03:39:59,826 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.9 pTM=0.471 ipTM=0.175 tol=1.38 2024-07-27 03:40:18,603 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.8 pTM=0.469 ipTM=0.178 tol=1.42 2024-07-27 03:40:37,333 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.8 pTM=0.471 ipTM=0.183 tol=1.57 2024-07-27 03:40:56,096 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.7 pTM=0.469 ipTM=0.166 tol=1.95 2024-07-27 03:41:14,858 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.9 pTM=0.47 ipTM=0.179 tol=1.79 2024-07-27 03:41:33,616 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.8 pTM=0.471 ipTM=0.18 tol=1.8 2024-07-27 03:41:52,370 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.9 pTM=0.471 ipTM=0.181 tol=1.43 2024-07-27 03:41:52,371 alphafold2_multimer_v3_model_3_seed_000 took 581.8s (30 recycles) 2024-07-27 03:42:11,590 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.6 pTM=0.463 ipTM=0.179 2024-07-27 03:42:30,270 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.4 pTM=0.475 ipTM=0.246 tol=16.9 2024-07-27 03:42:48,954 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.8 pTM=0.475 ipTM=0.219 tol=7.7 2024-07-27 03:43:07,595 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49 pTM=0.474 ipTM=0.22 tol=8.62 2024-07-27 03:43:26,240 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49 pTM=0.474 ipTM=0.221 tol=4.97 2024-07-27 03:43:44,900 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.1 pTM=0.475 ipTM=0.224 tol=3.18 2024-07-27 03:44:03,566 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.1 pTM=0.476 ipTM=0.214 tol=2 2024-07-27 03:44:22,248 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.1 pTM=0.475 ipTM=0.221 tol=2.48 2024-07-27 03:44:40,930 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.1 pTM=0.475 ipTM=0.22 tol=2.9 2024-07-27 03:44:59,587 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.1 pTM=0.474 ipTM=0.223 tol=3.37 2024-07-27 03:45:18,264 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.1 pTM=0.474 ipTM=0.214 tol=2.05 2024-07-27 03:45:36,947 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.1 pTM=0.474 ipTM=0.213 tol=1.96 2024-07-27 03:45:55,664 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.1 pTM=0.475 ipTM=0.217 tol=2.37 2024-07-27 03:46:14,380 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.1 pTM=0.475 ipTM=0.221 tol=1.52 2024-07-27 03:46:33,060 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.1 pTM=0.475 ipTM=0.221 tol=1.5 2024-07-27 03:46:51,814 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.2 pTM=0.476 ipTM=0.224 tol=2.25 2024-07-27 03:47:10,551 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.1 pTM=0.475 ipTM=0.218 tol=1.74 2024-07-27 03:47:29,281 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.3 pTM=0.477 ipTM=0.225 tol=1.42 2024-07-27 03:47:48,032 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.2 pTM=0.477 ipTM=0.22 tol=1.44 2024-07-27 03:48:06,762 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49 pTM=0.475 ipTM=0.213 tol=2.09 2024-07-27 03:48:25,513 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.2 pTM=0.477 ipTM=0.218 tol=1.96 2024-07-27 03:48:44,236 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.1 pTM=0.475 ipTM=0.218 tol=1.7 2024-07-27 03:49:02,990 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.2 pTM=0.475 ipTM=0.218 tol=1.73 2024-07-27 03:49:21,721 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.1 pTM=0.475 ipTM=0.214 tol=2.12 2024-07-27 03:49:40,435 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.1 pTM=0.475 ipTM=0.213 tol=1.48 2024-07-27 03:49:59,160 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.1 pTM=0.475 ipTM=0.213 tol=1.87 2024-07-27 03:50:17,885 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.1 pTM=0.476 ipTM=0.219 tol=1.93 2024-07-27 03:50:36,597 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.1 pTM=0.475 ipTM=0.214 tol=2.45 2024-07-27 03:50:55,324 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.1 pTM=0.475 ipTM=0.219 tol=2.15 2024-07-27 03:51:14,022 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.2 pTM=0.475 ipTM=0.213 tol=1.76 2024-07-27 03:51:32,724 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.1 pTM=0.474 ipTM=0.217 tol=2.14 2024-07-27 03:51:32,725 alphafold2_multimer_v3_model_4_seed_000 took 579.8s (30 recycles) 2024-07-27 03:51:52,063 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.2 pTM=0.457 ipTM=0.141 2024-07-27 03:52:10,873 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.7 pTM=0.472 ipTM=0.472 tol=23.1 2024-07-27 03:52:29,686 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.8 pTM=0.469 ipTM=0.205 tol=11.7 2024-07-27 03:52:48,527 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.1 pTM=0.475 ipTM=0.506 tol=8.64 2024-07-27 03:53:07,348 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.2 pTM=0.477 ipTM=0.484 tol=5.98 2024-07-27 03:53:26,127 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.2 pTM=0.479 ipTM=0.489 tol=4.97 2024-07-27 03:53:44,942 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.3 pTM=0.476 ipTM=0.496 tol=3.44 2024-07-27 03:54:03,738 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.2 pTM=0.487 ipTM=0.5 tol=11 2024-07-27 03:54:22,537 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.1 pTM=0.476 ipTM=0.501 tol=6.16 2024-07-27 03:54:41,348 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.2 pTM=0.475 ipTM=0.493 tol=6 2024-07-27 03:55:00,160 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.2 pTM=0.475 ipTM=0.506 tol=4.03 2024-07-27 03:55:18,950 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.3 pTM=0.485 ipTM=0.504 tol=6.61 2024-07-27 03:55:37,788 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50 pTM=0.476 ipTM=0.486 tol=4.03 2024-07-27 03:55:56,634 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.2 pTM=0.473 ipTM=0.485 tol=5.61 2024-07-27 03:56:15,473 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.2 pTM=0.475 ipTM=0.495 tol=8.73 2024-07-27 03:56:34,285 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.3 pTM=0.477 ipTM=0.487 tol=6.21 2024-07-27 03:56:53,089 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.2 pTM=0.475 ipTM=0.493 tol=4.97 2024-07-27 03:57:11,908 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.1 pTM=0.477 ipTM=0.487 tol=5.72 2024-07-27 03:57:30,745 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.2 pTM=0.474 ipTM=0.487 tol=5.48 2024-07-27 03:57:49,554 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.1 pTM=0.474 ipTM=0.477 tol=7.7 2024-07-27 03:58:08,367 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50 pTM=0.479 ipTM=0.499 tol=4.24 2024-07-27 03:58:27,185 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50 pTM=0.475 ipTM=0.478 tol=4.68 2024-07-27 03:58:46,029 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.4 pTM=0.477 ipTM=0.485 tol=9.8 2024-07-27 03:59:04,850 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.5 pTM=0.477 ipTM=0.481 tol=4.25 2024-07-27 03:59:23,679 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.4 pTM=0.476 ipTM=0.487 tol=3.99 2024-07-27 03:59:42,513 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.2 pTM=0.475 ipTM=0.48 tol=4.66 2024-07-27 04:00:01,355 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.8 pTM=0.481 ipTM=0.49 tol=11.7 2024-07-27 04:00:20,226 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.8 pTM=0.473 ipTM=0.486 tol=6.81 2024-07-27 04:00:39,123 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.2 pTM=0.473 ipTM=0.494 tol=9.88 2024-07-27 04:00:57,975 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.2 pTM=0.475 ipTM=0.487 tol=11.4 2024-07-27 04:01:16,794 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50 pTM=0.484 ipTM=0.483 tol=14.1 2024-07-27 04:01:16,795 alphafold2_multimer_v3_model_5_seed_000 took 583.5s (30 recycles) 2024-07-27 04:01:17,332 reranking models by 'multimer' metric 2024-07-27 04:01:20,590 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 04:02:43,889 Relaxation took 86.6s 2024-07-27 04:02:43,889 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50 pTM=0.484 ipTM=0.483 2024-07-27 04:04:15,456 Relaxation took 91.6s 2024-07-27 04:04:15,456 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.1 pTM=0.474 ipTM=0.217 2024-07-27 04:09:30,885 Relaxation took 315.4s 2024-07-27 04:09:30,886 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.9 pTM=0.471 ipTM=0.181 2024-07-27 04:11:06,353 Relaxation took 95.5s 2024-07-27 04:11:06,353 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.9 pTM=0.461 ipTM=0.149 2024-07-27 04:12:34,320 Relaxation took 88.0s 2024-07-27 04:12:34,321 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.7 pTM=0.461 ipTM=0.141 2024-07-27 04:12:35,981 Done