2024-07-27 03:21:54,365 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 03:21:54,727 Running on GPU
2024-07-27 03:21:58,385 Found 6 citations for tools or databases
2024-07-27 03:21:58,385 Query 1/1: NEIL3_KLHDC3 (length 988)
2024-07-27 03:21:58,840 Sleeping for 7s. Reason: PENDING
2024-07-27 03:22:06,268 Sleeping for 9s. Reason: RUNNING
2024-07-27 03:22:15,701 Sleeping for 9s. Reason: RUNNING
2024-07-27 03:22:25,149 Sleeping for 7s. Reason: RUNNING
2024-07-27 03:22:32,574 Sleeping for 10s. Reason: RUNNING
2024-07-27 03:22:43,017 Sleeping for 8s. Reason: RUNNING
2024-07-27 03:22:51,433 Sleeping for 9s. Reason: RUNNING
2024-07-27 03:23:00,862 Sleeping for 10s. Reason: RUNNING
2024-07-27 03:23:11,291 Sleeping for 10s. Reason: RUNNING
2024-07-27 03:23:21,735 Sleeping for 5s. Reason: RUNNING
2024-07-27 03:23:27,171 Sleeping for 8s. Reason: RUNNING
2024-07-27 03:23:35,602 Sleeping for 8s. Reason: RUNNING
2024-07-27 03:23:44,022 Sleeping for 6s. Reason: RUNNING
2024-07-27 03:23:52,157 Sleeping for 7s. Reason: PENDING
2024-07-27 03:23:59,587 Sleeping for 10s. Reason: RUNNING
2024-07-27 03:24:10,022 Sleeping for 9s. Reason: RUNNING
2024-07-27 03:24:19,451 Sleeping for 9s. Reason: RUNNING
2024-07-27 03:24:28,876 Sleeping for 8s. Reason: RUNNING
2024-07-27 03:24:37,309 Sleeping for 8s. Reason: RUNNING
2024-07-27 03:24:45,751 Sleeping for 7s. Reason: RUNNING
2024-07-27 03:24:53,167 Sleeping for 6s. Reason: RUNNING
2024-07-27 03:24:59,594 Sleeping for 9s. Reason: RUNNING
2024-07-27 03:25:12,324 Setting max_seq=508, max_extra_seq=2048
2024-07-27 03:28:31,061 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.8 pTM=0.459 ipTM=0.295
2024-07-27 03:28:56,142 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.4 pTM=0.463 ipTM=0.188 tol=15.1
2024-07-27 03:29:21,307 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.458 ipTM=0.178 tol=5.91
2024-07-27 03:29:46,545 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.6 pTM=0.458 ipTM=0.182 tol=5.05
2024-07-27 03:30:11,851 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.6 pTM=0.459 ipTM=0.169 tol=4.28
2024-07-27 03:30:37,163 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.4 pTM=0.459 ipTM=0.172 tol=2.56
2024-07-27 03:31:02,503 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.1 pTM=0.457 ipTM=0.168 tol=1.69
2024-07-27 03:31:27,852 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.6 pTM=0.458 ipTM=0.172 tol=1.04
2024-07-27 03:31:53,226 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.9 pTM=0.459 ipTM=0.179 tol=3.55
2024-07-27 03:32:18,606 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.4 pTM=0.458 ipTM=0.172 tol=2.27
2024-07-27 03:32:44,020 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.6 pTM=0.457 ipTM=0.172 tol=2.08
2024-07-27 03:33:09,430 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.7 pTM=0.458 ipTM=0.174 tol=1.9
2024-07-27 03:33:34,851 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.6 pTM=0.456 ipTM=0.174 tol=2.6
2024-07-27 03:34:00,295 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.3 pTM=0.457 ipTM=0.173 tol=1.94
2024-07-27 03:34:25,749 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.7 pTM=0.457 ipTM=0.18 tol=2.61
2024-07-27 03:34:51,180 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.6 pTM=0.457 ipTM=0.174 tol=4.07
2024-07-27 03:35:16,608 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.4 pTM=0.457 ipTM=0.171 tol=2.2
2024-07-27 03:35:42,037 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67 pTM=0.457 ipTM=0.169 tol=5.91
2024-07-27 03:36:07,464 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.3 pTM=0.456 ipTM=0.168 tol=6.07
2024-07-27 03:36:32,869 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.8 pTM=0.458 ipTM=0.173 tol=8.55
2024-07-27 03:36:58,287 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.1 pTM=0.456 ipTM=0.171 tol=7.59
2024-07-27 03:37:23,702 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.4 pTM=0.457 ipTM=0.172 tol=5.58
2024-07-27 03:37:49,178 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.2 pTM=0.456 ipTM=0.168 tol=5.91
2024-07-27 03:38:14,691 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.5 pTM=0.454 ipTM=0.165 tol=5
2024-07-27 03:38:40,173 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.4 pTM=0.455 ipTM=0.171 tol=3.93
2024-07-27 03:39:05,639 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.5 pTM=0.456 ipTM=0.168 tol=4.19
2024-07-27 03:39:31,076 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.1 pTM=0.456 ipTM=0.172 tol=3.95
2024-07-27 03:39:56,508 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.6 pTM=0.454 ipTM=0.167 tol=5.7
2024-07-27 03:40:21,931 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.2 pTM=0.455 ipTM=0.167 tol=6.56
2024-07-27 03:40:47,363 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.4 pTM=0.456 ipTM=0.173 tol=4.16
2024-07-27 03:41:12,765 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.3 pTM=0.454 ipTM=0.169 tol=2.45
2024-07-27 03:41:12,766 alphafold2_multimer_v3_model_1_seed_000 took 954.7s (30 recycles)
2024-07-27 03:41:39,055 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.6 pTM=0.448 ipTM=0.177
2024-07-27 03:42:04,578 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.1 pTM=0.458 ipTM=0.195 tol=10.6
2024-07-27 03:42:30,121 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.8 pTM=0.446 ipTM=0.169 tol=8.46
2024-07-27 03:42:55,676 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.9 pTM=0.448 ipTM=0.163 tol=5.93
2024-07-27 03:43:21,225 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.9 pTM=0.447 ipTM=0.169 tol=5.75
2024-07-27 03:43:46,758 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.9 pTM=0.451 ipTM=0.167 tol=3.9
2024-07-27 03:44:12,296 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.9 pTM=0.449 ipTM=0.168 tol=3.76
2024-07-27 03:44:37,862 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.9 pTM=0.451 ipTM=0.167 tol=3.07
2024-07-27 03:45:03,439 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.9 pTM=0.449 ipTM=0.167 tol=5.15
2024-07-27 03:45:28,977 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.8 pTM=0.448 ipTM=0.169 tol=5.4
2024-07-27 03:45:54,461 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.1 pTM=0.448 ipTM=0.167 tol=4.11
2024-07-27 03:46:19,959 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.1 pTM=0.452 ipTM=0.168 tol=4.02
2024-07-27 03:46:45,446 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.2 pTM=0.448 ipTM=0.164 tol=10.4
2024-07-27 03:47:10,946 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.2 pTM=0.452 ipTM=0.169 tol=3.37
2024-07-27 03:47:36,435 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.2 pTM=0.452 ipTM=0.168 tol=3.28
2024-07-27 03:48:01,913 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.6 pTM=0.451 ipTM=0.167 tol=3.74
2024-07-27 03:48:27,382 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.4 pTM=0.449 ipTM=0.166 tol=3.27
2024-07-27 03:48:52,853 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.6 pTM=0.45 ipTM=0.166 tol=2.56
2024-07-27 03:49:18,322 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.4 pTM=0.449 ipTM=0.17 tol=2.24
2024-07-27 03:49:43,796 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.4 pTM=0.45 ipTM=0.164 tol=1.53
2024-07-27 03:50:09,255 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.3 pTM=0.451 ipTM=0.172 tol=3.39
2024-07-27 03:50:34,748 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.4 pTM=0.45 ipTM=0.166 tol=3.67
2024-07-27 03:51:00,208 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.1 pTM=0.453 ipTM=0.173 tol=3.24
2024-07-27 03:51:25,698 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.5 pTM=0.449 ipTM=0.164 tol=3.35
2024-07-27 03:51:51,159 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.2 pTM=0.451 ipTM=0.173 tol=2.05
2024-07-27 03:52:16,624 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.4 pTM=0.449 ipTM=0.164 tol=3.12
2024-07-27 03:52:42,091 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.1 pTM=0.452 ipTM=0.171 tol=2.73
2024-07-27 03:53:07,562 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.6 pTM=0.449 ipTM=0.163 tol=2.9
2024-07-27 03:53:33,031 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.2 pTM=0.45 ipTM=0.167 tol=2.35
2024-07-27 03:53:58,485 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.6 pTM=0.448 ipTM=0.165 tol=3.04
2024-07-27 03:54:23,938 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.2 pTM=0.451 ipTM=0.167 tol=3.09
2024-07-27 03:54:23,939 alphafold2_multimer_v3_model_2_seed_000 took 790.4s (30 recycles)
2024-07-27 03:54:50,199 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.4 pTM=0.469 ipTM=0.216
2024-07-27 03:55:15,715 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.8 pTM=0.47 ipTM=0.195 tol=8.55
2024-07-27 03:55:41,247 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.2 pTM=0.46 ipTM=0.202 tol=8.31
2024-07-27 03:56:06,781 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.1 pTM=0.464 ipTM=0.197 tol=5.97
2024-07-27 03:56:32,306 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.3 pTM=0.463 ipTM=0.192 tol=3.64
2024-07-27 03:56:57,808 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.3 pTM=0.467 ipTM=0.199 tol=7.52
2024-07-27 03:57:23,308 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.6 pTM=0.471 ipTM=0.199 tol=5.96
2024-07-27 03:57:48,851 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.3 pTM=0.467 ipTM=0.176 tol=5.31
2024-07-27 03:58:14,377 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.6 pTM=0.469 ipTM=0.19 tol=5.53
2024-07-27 03:58:39,912 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.7 pTM=0.468 ipTM=0.175 tol=4.19
2024-07-27 03:59:05,425 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.6 pTM=0.47 ipTM=0.181 tol=3.84
2024-07-27 03:59:30,960 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.469 ipTM=0.179 tol=3.66
2024-07-27 03:59:56,494 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.6 pTM=0.47 ipTM=0.181 tol=5.61
2024-07-27 04:00:21,994 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.6 pTM=0.472 ipTM=0.187 tol=5.82
2024-07-27 04:00:47,493 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.5 pTM=0.467 ipTM=0.177 tol=3.28
2024-07-27 04:01:13,007 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.4 pTM=0.471 ipTM=0.181 tol=4.5
2024-07-27 04:01:38,496 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.6 pTM=0.47 ipTM=0.19 tol=4.06
2024-07-27 04:02:03,983 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.1 pTM=0.468 ipTM=0.176 tol=3.01
2024-07-27 04:02:29,474 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.6 pTM=0.467 ipTM=0.185 tol=2.92
2024-07-27 04:02:54,951 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.2 pTM=0.468 ipTM=0.176 tol=3.03
2024-07-27 04:03:20,428 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.3 pTM=0.469 ipTM=0.181 tol=3.21
2024-07-27 04:03:45,896 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.2 pTM=0.468 ipTM=0.177 tol=2.63
2024-07-27 04:04:11,372 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.5 pTM=0.474 ipTM=0.248 tol=3.52
2024-07-27 04:04:36,855 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.1 pTM=0.468 ipTM=0.175 tol=5.52
2024-07-27 04:05:02,349 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.7 pTM=0.469 ipTM=0.184 tol=4.5
2024-07-27 04:05:27,837 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.7 pTM=0.469 ipTM=0.181 tol=5.7
2024-07-27 04:05:53,358 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.4 pTM=0.467 ipTM=0.186 tol=4.78
2024-07-27 04:06:18,851 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.4 pTM=0.471 ipTM=0.183 tol=4.09
2024-07-27 04:06:44,357 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.4 pTM=0.467 ipTM=0.176 tol=2.54
2024-07-27 04:07:09,868 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.467 ipTM=0.176 tol=2.3
2024-07-27 04:07:35,369 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.3 pTM=0.473 ipTM=0.196 tol=2.13
2024-07-27 04:07:35,370 alphafold2_multimer_v3_model_3_seed_000 took 790.7s (30 recycles)
2024-07-27 04:08:01,635 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.8 pTM=0.453 ipTM=0.158
2024-07-27 04:08:27,121 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.6 pTM=0.464 ipTM=0.172 tol=12.7
2024-07-27 04:08:52,618 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.6 pTM=0.455 ipTM=0.16 tol=9.45
2024-07-27 04:09:18,114 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.6 pTM=0.458 ipTM=0.168 tol=6.92
2024-07-27 04:09:43,593 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.1 pTM=0.457 ipTM=0.168 tol=3.69
2024-07-27 04:10:09,066 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.1 pTM=0.456 ipTM=0.164 tol=3.5
2024-07-27 04:10:34,542 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.4 pTM=0.457 ipTM=0.167 tol=4.25
2024-07-27 04:11:00,002 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.9 pTM=0.459 ipTM=0.17 tol=2.83
2024-07-27 04:11:25,443 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.1 pTM=0.458 ipTM=0.169 tol=5.17
2024-07-27 04:11:50,911 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.8 pTM=0.459 ipTM=0.167 tol=4.19
2024-07-27 04:12:16,379 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.1 pTM=0.459 ipTM=0.191 tol=3.1
2024-07-27 04:12:41,873 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.1 pTM=0.459 ipTM=0.169 tol=2.64
2024-07-27 04:13:07,371 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.2 pTM=0.456 ipTM=0.167 tol=6.37
2024-07-27 04:13:32,837 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.9 pTM=0.458 ipTM=0.17 tol=3.12
2024-07-27 04:13:58,331 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67 pTM=0.458 ipTM=0.168 tol=3.82
2024-07-27 04:14:23,818 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.2 pTM=0.459 ipTM=0.171 tol=6.3
2024-07-27 04:14:49,271 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.8 pTM=0.458 ipTM=0.166 tol=3.58
2024-07-27 04:15:14,721 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.458 ipTM=0.171 tol=8
2024-07-27 04:15:40,146 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.2 pTM=0.456 ipTM=0.169 tol=4.62
2024-07-27 04:16:05,612 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.9 pTM=0.458 ipTM=0.174 tol=2.12
2024-07-27 04:16:31,072 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.6 pTM=0.461 ipTM=0.175 tol=4.28
2024-07-27 04:16:56,570 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.9 pTM=0.458 ipTM=0.174 tol=3.45
2024-07-27 04:17:22,059 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.9 pTM=0.457 ipTM=0.17 tol=4.19
2024-07-27 04:17:47,512 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.8 pTM=0.458 ipTM=0.172 tol=3.17
2024-07-27 04:18:12,953 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67 pTM=0.457 ipTM=0.174 tol=1.62
2024-07-27 04:18:38,383 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67 pTM=0.456 ipTM=0.172 tol=1.97
2024-07-27 04:19:03,821 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.8 pTM=0.46 ipTM=0.175 tol=2.24
2024-07-27 04:19:29,261 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.6 pTM=0.461 ipTM=0.172 tol=1.61
2024-07-27 04:19:54,706 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.9 pTM=0.46 ipTM=0.175 tol=2.19
2024-07-27 04:20:20,160 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.6 pTM=0.459 ipTM=0.168 tol=3.3
2024-07-27 04:20:45,635 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.2 pTM=0.458 ipTM=0.17 tol=4.3
2024-07-27 04:20:45,636 alphafold2_multimer_v3_model_4_seed_000 took 789.5s (30 recycles)
2024-07-27 04:21:11,992 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.8 pTM=0.456 ipTM=0.177
2024-07-27 04:21:37,602 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.6 pTM=0.458 ipTM=0.168 tol=11.6
2024-07-27 04:22:03,250 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.8 pTM=0.448 ipTM=0.152 tol=8
2024-07-27 04:22:28,899 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.9 pTM=0.453 ipTM=0.159 tol=8.55
2024-07-27 04:22:54,547 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.2 pTM=0.447 ipTM=0.15 tol=6.86
2024-07-27 04:23:20,188 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.2 pTM=0.452 ipTM=0.157 tol=6.75
2024-07-27 04:23:45,842 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.3 pTM=0.448 ipTM=0.149 tol=4.32
2024-07-27 04:24:11,473 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.2 pTM=0.452 ipTM=0.155 tol=5.91
2024-07-27 04:24:37,090 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.4 pTM=0.452 ipTM=0.161 tol=4.31
2024-07-27 04:25:02,732 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.8 pTM=0.456 ipTM=0.165 tol=5.63
2024-07-27 04:25:28,350 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.6 pTM=0.454 ipTM=0.163 tol=14.1
2024-07-27 04:25:53,962 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.6 pTM=0.457 ipTM=0.173 tol=14.4
2024-07-27 04:26:19,602 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.3 pTM=0.452 ipTM=0.159 tol=7.48
2024-07-27 04:26:45,189 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.1 pTM=0.46 ipTM=0.17 tol=8.23
2024-07-27 04:27:10,785 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.3 pTM=0.451 ipTM=0.149 tol=6.18
2024-07-27 04:27:36,392 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.4 pTM=0.459 ipTM=0.167 tol=5.51
2024-07-27 04:28:01,976 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.2 pTM=0.452 ipTM=0.149 tol=3.71
2024-07-27 04:28:27,566 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68 pTM=0.459 ipTM=0.164 tol=3.6
2024-07-27 04:28:53,161 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.4 pTM=0.452 ipTM=0.15 tol=4.22
2024-07-27 04:29:18,744 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.2 pTM=0.457 ipTM=0.16 tol=2.53
2024-07-27 04:29:44,363 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.3 pTM=0.45 ipTM=0.148 tol=5.11
2024-07-27 04:30:09,978 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.3 pTM=0.456 ipTM=0.16 tol=4.46
2024-07-27 04:30:35,577 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.4 pTM=0.452 ipTM=0.151 tol=4.88
2024-07-27 04:31:01,184 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.2 pTM=0.457 ipTM=0.162 tol=4.87
2024-07-27 04:31:26,792 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.7 pTM=0.449 ipTM=0.151 tol=5.12
2024-07-27 04:31:52,368 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68 pTM=0.455 ipTM=0.161 tol=4.69
2024-07-27 04:32:17,982 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.4 pTM=0.451 ipTM=0.153 tol=5.61
2024-07-27 04:32:43,544 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.4 pTM=0.458 ipTM=0.165 tol=4.89
2024-07-27 04:33:09,136 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.6 pTM=0.453 ipTM=0.153 tol=4.01
2024-07-27 04:33:34,712 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.4 pTM=0.458 ipTM=0.168 tol=4.05
2024-07-27 04:34:00,325 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.6 pTM=0.452 ipTM=0.148 tol=4.51
2024-07-27 04:34:00,326 alphafold2_multimer_v3_model_5_seed_000 took 793.9s (30 recycles)
2024-07-27 04:34:01,089 reranking models by 'multimer' metric
2024-07-27 04:34:02,412 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 04:36:18,135 Relaxation took 137.0s
2024-07-27 04:36:18,136 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.3 pTM=0.473 ipTM=0.196
2024-07-27 04:38:58,444 Relaxation took 160.3s
2024-07-27 04:38:58,444 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.2 pTM=0.458 ipTM=0.17
2024-07-27 04:41:09,554 Relaxation took 131.1s
2024-07-27 04:41:09,554 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.3 pTM=0.454 ipTM=0.169
2024-07-27 04:43:36,811 Relaxation took 147.3s
2024-07-27 04:43:36,811 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.2 pTM=0.451 ipTM=0.167
2024-07-27 04:45:18,159 Relaxation took 101.3s
2024-07-27 04:45:18,159 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.6 pTM=0.452 ipTM=0.148
2024-07-27 04:45:20,370 Done