2024-07-27 04:04:17,333 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 04:04:17,698 Running on GPU 2024-07-27 04:04:21,147 Found 6 citations for tools or databases 2024-07-27 04:04:21,148 Query 1/1: NFIL3_GPS1 (length 953) 2024-07-27 04:04:21,587 Sleeping for 9s. Reason: PENDING 2024-07-27 04:04:31,012 Sleeping for 10s. Reason: RUNNING 2024-07-27 04:04:41,432 Sleeping for 8s. Reason: RUNNING 2024-07-27 04:04:49,889 Sleeping for 5s. Reason: RUNNING 2024-07-27 04:04:55,322 Sleeping for 10s. Reason: RUNNING 2024-07-27 04:05:07,267 Sleeping for 8s. Reason: PENDING 2024-07-27 04:05:15,682 Sleeping for 6s. Reason: RUNNING 2024-07-27 04:05:22,101 Sleeping for 8s. Reason: RUNNING 2024-07-27 04:05:30,555 Sleeping for 7s. Reason: RUNNING 2024-07-27 04:05:40,116 Setting max_seq=508, max_extra_seq=2048 2024-07-27 04:09:56,104 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.2 pTM=0.455 ipTM=0.129 2024-07-27 04:10:20,212 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.8 pTM=0.46 ipTM=0.136 tol=17 2024-07-27 04:10:44,405 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54 pTM=0.461 ipTM=0.135 tol=12.3 2024-07-27 04:11:08,654 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.3 pTM=0.462 ipTM=0.137 tol=9.12 2024-07-27 04:11:32,946 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.3 pTM=0.462 ipTM=0.137 tol=6.5 2024-07-27 04:11:57,268 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.6 pTM=0.461 ipTM=0.136 tol=6.26 2024-07-27 04:12:21,585 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.3 pTM=0.462 ipTM=0.141 tol=7.87 2024-07-27 04:12:45,916 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.2 pTM=0.461 ipTM=0.141 tol=7.4 2024-07-27 04:13:10,283 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.4 pTM=0.462 ipTM=0.14 tol=4.24 2024-07-27 04:13:34,637 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.3 pTM=0.46 ipTM=0.138 tol=4.34 2024-07-27 04:13:59,007 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.4 pTM=0.46 ipTM=0.14 tol=4.01 2024-07-27 04:14:23,367 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.4 pTM=0.461 ipTM=0.138 tol=4.75 2024-07-27 04:14:47,766 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.5 pTM=0.462 ipTM=0.139 tol=4.07 2024-07-27 04:15:12,133 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.3 pTM=0.461 ipTM=0.14 tol=7.31 2024-07-27 04:15:36,504 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.6 pTM=0.461 ipTM=0.138 tol=5.53 2024-07-27 04:16:00,879 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.4 pTM=0.46 ipTM=0.141 tol=3.12 2024-07-27 04:16:25,284 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.6 pTM=0.463 ipTM=0.139 tol=3.16 2024-07-27 04:16:49,676 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.4 pTM=0.462 ipTM=0.14 tol=5.18 2024-07-27 04:17:14,056 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.3 pTM=0.462 ipTM=0.14 tol=5.58 2024-07-27 04:17:38,477 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.4 pTM=0.461 ipTM=0.139 tol=7.11 2024-07-27 04:18:02,874 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.5 pTM=0.462 ipTM=0.138 tol=3.69 2024-07-27 04:18:27,254 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.6 pTM=0.462 ipTM=0.137 tol=5 2024-07-27 04:18:51,628 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.5 pTM=0.462 ipTM=0.138 tol=4.29 2024-07-27 04:19:16,032 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.6 pTM=0.464 ipTM=0.137 tol=4.48 2024-07-27 04:19:40,440 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.3 pTM=0.463 ipTM=0.139 tol=5.66 2024-07-27 04:20:04,853 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.4 pTM=0.463 ipTM=0.139 tol=4.5 2024-07-27 04:20:29,256 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.5 pTM=0.462 ipTM=0.138 tol=7.39 2024-07-27 04:20:53,657 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.6 pTM=0.461 ipTM=0.14 tol=6.46 2024-07-27 04:21:18,083 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.3 pTM=0.461 ipTM=0.137 tol=5.26 2024-07-27 04:21:42,464 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.6 pTM=0.46 ipTM=0.137 tol=4.16 2024-07-27 04:22:06,898 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.6 pTM=0.463 ipTM=0.135 tol=3.82 2024-07-27 04:22:06,899 alphafold2_multimer_v3_model_1_seed_000 took 980.1s (30 recycles) 2024-07-27 04:22:32,063 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.8 pTM=0.458 ipTM=0.13 2024-07-27 04:22:56,486 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.3 pTM=0.463 ipTM=0.14 tol=16.7 2024-07-27 04:23:20,938 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.8 pTM=0.464 ipTM=0.139 tol=8.64 2024-07-27 04:23:45,376 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.9 pTM=0.465 ipTM=0.141 tol=8.67 2024-07-27 04:24:09,804 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.8 pTM=0.467 ipTM=0.151 tol=9.47 2024-07-27 04:24:34,222 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.8 pTM=0.469 ipTM=0.16 tol=5.49 2024-07-27 04:24:58,632 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.9 pTM=0.47 ipTM=0.168 tol=5.38 2024-07-27 04:25:23,025 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.8 pTM=0.47 ipTM=0.171 tol=3.3 2024-07-27 04:25:47,444 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.8 pTM=0.471 ipTM=0.172 tol=2.33 2024-07-27 04:26:11,840 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.9 pTM=0.471 ipTM=0.173 tol=2.08 2024-07-27 04:26:36,247 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.9 pTM=0.473 ipTM=0.174 tol=3.51 2024-07-27 04:27:00,647 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55 pTM=0.473 ipTM=0.177 tol=2.96 2024-07-27 04:27:25,050 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.1 pTM=0.476 ipTM=0.181 tol=4.1 2024-07-27 04:27:49,446 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.1 pTM=0.475 ipTM=0.181 tol=2.95 2024-07-27 04:28:13,845 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.2 pTM=0.475 ipTM=0.182 tol=2.22 2024-07-27 04:28:38,243 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.1 pTM=0.475 ipTM=0.184 tol=1.97 2024-07-27 04:29:02,649 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.2 pTM=0.479 ipTM=0.188 tol=2.9 2024-07-27 04:29:27,040 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.3 pTM=0.477 ipTM=0.19 tol=2.92 2024-07-27 04:29:51,442 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.2 pTM=0.478 ipTM=0.188 tol=3.28 2024-07-27 04:30:15,831 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.2 pTM=0.475 ipTM=0.184 tol=2.84 2024-07-27 04:30:40,262 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.2 pTM=0.479 ipTM=0.183 tol=2.51 2024-07-27 04:31:04,658 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.1 pTM=0.476 ipTM=0.177 tol=2.44 2024-07-27 04:31:29,049 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55 pTM=0.472 ipTM=0.17 tol=2.71 2024-07-27 04:31:53,437 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.1 pTM=0.474 ipTM=0.168 tol=2.93 2024-07-27 04:32:17,864 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.9 pTM=0.472 ipTM=0.168 tol=3.18 2024-07-27 04:32:42,284 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.8 pTM=0.472 ipTM=0.167 tol=2.34 2024-07-27 04:33:06,720 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.8 pTM=0.468 ipTM=0.154 tol=6.79 2024-07-27 04:33:31,150 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.6 pTM=0.47 ipTM=0.165 tol=7.73 2024-07-27 04:33:55,585 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.4 pTM=0.467 ipTM=0.153 tol=8.33 2024-07-27 04:34:19,995 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.5 pTM=0.467 ipTM=0.152 tol=6.88 2024-07-27 04:34:44,478 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.5 pTM=0.469 ipTM=0.143 tol=4.67 2024-07-27 04:34:44,479 alphafold2_multimer_v3_model_2_seed_000 took 756.9s (30 recycles) 2024-07-27 04:35:09,817 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.8 pTM=0.462 ipTM=0.133 2024-07-27 04:35:34,486 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.8 pTM=0.464 ipTM=0.14 tol=17.9 2024-07-27 04:35:59,065 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.1 pTM=0.466 ipTM=0.137 tol=11.6 2024-07-27 04:36:23,575 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.2 pTM=0.467 ipTM=0.14 tol=7.28 2024-07-27 04:36:48,075 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.4 pTM=0.468 ipTM=0.14 tol=6.3 2024-07-27 04:37:12,553 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.5 pTM=0.469 ipTM=0.142 tol=5.92 2024-07-27 04:37:37,029 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.5 pTM=0.468 ipTM=0.141 tol=3.28 2024-07-27 04:38:01,535 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.6 pTM=0.469 ipTM=0.143 tol=2.79 2024-07-27 04:38:26,010 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.8 pTM=0.469 ipTM=0.141 tol=3.05 2024-07-27 04:38:50,497 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.7 pTM=0.469 ipTM=0.141 tol=3.18 2024-07-27 04:39:14,981 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.7 pTM=0.469 ipTM=0.143 tol=2.34 2024-07-27 04:39:39,435 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.6 pTM=0.469 ipTM=0.144 tol=2.33 2024-07-27 04:40:03,892 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.6 pTM=0.47 ipTM=0.144 tol=1.8 2024-07-27 04:40:28,325 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.7 pTM=0.47 ipTM=0.146 tol=2.25 2024-07-27 04:40:52,738 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.9 pTM=0.47 ipTM=0.145 tol=2.44 2024-07-27 04:41:17,160 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55 pTM=0.472 ipTM=0.145 tol=2.2 2024-07-27 04:41:41,611 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.8 pTM=0.471 ipTM=0.143 tol=2.05 2024-07-27 04:42:06,068 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.7 pTM=0.471 ipTM=0.142 tol=2.04 2024-07-27 04:42:30,515 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.7 pTM=0.471 ipTM=0.146 tol=1.79 2024-07-27 04:42:54,950 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.7 pTM=0.47 ipTM=0.143 tol=1.97 2024-07-27 04:43:19,409 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.6 pTM=0.472 ipTM=0.145 tol=1.79 2024-07-27 04:43:43,852 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.7 pTM=0.471 ipTM=0.144 tol=1.64 2024-07-27 04:44:08,267 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.7 pTM=0.471 ipTM=0.143 tol=1.83 2024-07-27 04:44:32,706 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.7 pTM=0.471 ipTM=0.144 tol=2.23 2024-07-27 04:44:57,159 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.7 pTM=0.471 ipTM=0.142 tol=2.04 2024-07-27 04:45:21,610 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.6 pTM=0.47 ipTM=0.143 tol=1.53 2024-07-27 04:45:46,045 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.7 pTM=0.471 ipTM=0.146 tol=2.26 2024-07-27 04:46:10,485 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.8 pTM=0.471 ipTM=0.144 tol=1.81 2024-07-27 04:46:34,918 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.5 pTM=0.47 ipTM=0.143 tol=2.07 2024-07-27 04:46:59,341 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.47 ipTM=0.142 tol=1.29 2024-07-27 04:47:23,799 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.4 pTM=0.471 ipTM=0.141 tol=2.38 2024-07-27 04:47:23,800 alphafold2_multimer_v3_model_3_seed_000 took 758.6s (30 recycles) 2024-07-27 04:47:49,063 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.9 pTM=0.456 ipTM=0.142 2024-07-27 04:48:13,597 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.2 pTM=0.46 ipTM=0.14 tol=19.5 2024-07-27 04:48:38,113 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.8 pTM=0.461 ipTM=0.14 tol=8.7 2024-07-27 04:49:02,651 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.2 pTM=0.46 ipTM=0.138 tol=7.67 2024-07-27 04:49:27,161 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.3 pTM=0.459 ipTM=0.139 tol=6.05 2024-07-27 04:49:51,708 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.4 pTM=0.46 ipTM=0.14 tol=6.16 2024-07-27 04:50:16,250 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.4 pTM=0.46 ipTM=0.14 tol=7.45 2024-07-27 04:50:40,812 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.3 pTM=0.461 ipTM=0.139 tol=8.1 2024-07-27 04:51:05,373 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.4 pTM=0.461 ipTM=0.139 tol=7.64 2024-07-27 04:51:29,904 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.7 pTM=0.46 ipTM=0.139 tol=5.66 2024-07-27 04:51:54,441 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.4 pTM=0.459 ipTM=0.139 tol=6.38 2024-07-27 04:52:18,985 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.4 pTM=0.46 ipTM=0.138 tol=2.85 2024-07-27 04:52:43,523 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.8 pTM=0.461 ipTM=0.142 tol=5.53 2024-07-27 04:53:08,049 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.5 pTM=0.459 ipTM=0.139 tol=5.11 2024-07-27 04:53:32,573 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.6 pTM=0.46 ipTM=0.14 tol=5.34 2024-07-27 04:53:57,083 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.7 pTM=0.459 ipTM=0.139 tol=3.48 2024-07-27 04:54:21,624 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.6 pTM=0.46 ipTM=0.139 tol=6.18 2024-07-27 04:54:46,167 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.4 pTM=0.459 ipTM=0.137 tol=3.82 2024-07-27 04:55:10,694 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.4 pTM=0.459 ipTM=0.14 tol=2.72 2024-07-27 04:55:35,222 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.5 pTM=0.458 ipTM=0.137 tol=6.35 2024-07-27 04:55:59,802 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.8 pTM=0.46 ipTM=0.139 tol=4.51 2024-07-27 04:56:24,347 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.7 pTM=0.459 ipTM=0.137 tol=6.52 2024-07-27 04:56:48,889 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.5 pTM=0.458 ipTM=0.136 tol=5.9 2024-07-27 04:57:13,431 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.7 pTM=0.458 ipTM=0.135 tol=3.98 2024-07-27 04:57:37,980 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.6 pTM=0.459 ipTM=0.139 tol=6.79 2024-07-27 04:58:02,537 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.5 pTM=0.459 ipTM=0.138 tol=3.35 2024-07-27 04:58:27,086 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.7 pTM=0.458 ipTM=0.136 tol=6.17 2024-07-27 04:58:51,643 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.6 pTM=0.458 ipTM=0.136 tol=5.79 2024-07-27 04:59:16,192 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.4 pTM=0.459 ipTM=0.138 tol=3.32 2024-07-27 04:59:40,730 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.6 pTM=0.458 ipTM=0.137 tol=3.88 2024-07-27 05:00:05,260 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.7 pTM=0.459 ipTM=0.139 tol=2.98 2024-07-27 05:00:05,261 alphafold2_multimer_v3_model_4_seed_000 took 760.7s (30 recycles) 2024-07-27 05:00:30,559 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.2 pTM=0.461 ipTM=0.136 2024-07-27 05:00:55,101 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.8 pTM=0.463 ipTM=0.137 tol=9.38 2024-07-27 05:01:19,637 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.3 pTM=0.464 ipTM=0.137 tol=7.09 2024-07-27 05:01:44,194 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.6 pTM=0.465 ipTM=0.141 tol=5.59 2024-07-27 05:02:08,731 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.8 pTM=0.467 ipTM=0.144 tol=5.6 2024-07-27 05:02:33,248 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.8 pTM=0.467 ipTM=0.156 tol=4.24 2024-07-27 05:02:57,759 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.8 pTM=0.469 ipTM=0.165 tol=3.02 2024-07-27 05:03:22,253 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.9 pTM=0.469 ipTM=0.167 tol=2.4 2024-07-27 05:03:46,743 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55 pTM=0.47 ipTM=0.17 tol=3.41 2024-07-27 05:04:11,223 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.1 pTM=0.471 ipTM=0.172 tol=3.61 2024-07-27 05:04:35,711 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.2 pTM=0.472 ipTM=0.176 tol=3.24 2024-07-27 05:05:00,193 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.1 pTM=0.472 ipTM=0.177 tol=1.76 2024-07-27 05:05:24,677 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.2 pTM=0.472 ipTM=0.177 tol=3.96 2024-07-27 05:05:49,165 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.1 pTM=0.471 ipTM=0.172 tol=2.64 2024-07-27 05:06:13,644 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.1 pTM=0.47 ipTM=0.17 tol=3.07 2024-07-27 05:06:38,129 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.2 pTM=0.471 ipTM=0.174 tol=2.86 2024-07-27 05:07:02,606 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.1 pTM=0.473 ipTM=0.179 tol=5.05 2024-07-27 05:07:27,091 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.3 pTM=0.474 ipTM=0.177 tol=1.47 2024-07-27 05:07:51,550 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.2 pTM=0.474 ipTM=0.181 tol=1.63 2024-07-27 05:08:15,975 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.2 pTM=0.473 ipTM=0.178 tol=1.28 2024-07-27 05:08:40,409 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.3 pTM=0.475 ipTM=0.181 tol=3.06 2024-07-27 05:09:04,849 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.3 pTM=0.474 ipTM=0.175 tol=3.39 2024-07-27 05:09:29,287 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.1 pTM=0.471 ipTM=0.162 tol=3.54 2024-07-27 05:09:53,727 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55 pTM=0.468 ipTM=0.156 tol=2.54 2024-07-27 05:10:18,191 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.9 pTM=0.47 ipTM=0.167 tol=4.12 2024-07-27 05:10:42,655 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.9 pTM=0.469 ipTM=0.166 tol=3.87 2024-07-27 05:11:07,105 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.1 pTM=0.469 ipTM=0.165 tol=3.49 2024-07-27 05:11:31,576 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55 pTM=0.47 ipTM=0.171 tol=2.38 2024-07-27 05:11:56,030 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.8 pTM=0.469 ipTM=0.165 tol=3.93 2024-07-27 05:12:20,480 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.8 pTM=0.468 ipTM=0.159 tol=2.06 2024-07-27 05:12:44,944 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.9 pTM=0.47 ipTM=0.166 tol=1.72 2024-07-27 05:12:44,945 alphafold2_multimer_v3_model_5_seed_000 took 759.0s (30 recycles) 2024-07-27 05:12:45,664 reranking models by 'multimer' metric 2024-07-27 05:12:49,232 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 05:14:09,154 Relaxation took 83.5s 2024-07-27 05:14:09,154 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.9 pTM=0.47 ipTM=0.166 2024-07-27 05:15:36,100 Relaxation took 86.9s 2024-07-27 05:15:36,101 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.5 pTM=0.469 ipTM=0.143 2024-07-27 05:17:29,300 Relaxation took 113.2s 2024-07-27 05:17:29,301 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.4 pTM=0.471 ipTM=0.141 2024-07-27 05:19:12,093 Relaxation took 102.8s 2024-07-27 05:19:12,093 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.7 pTM=0.459 ipTM=0.139 2024-07-27 05:20:50,874 Relaxation took 98.8s 2024-07-27 05:20:50,874 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.6 pTM=0.463 ipTM=0.135 2024-07-27 05:20:52,903 Done