2024-07-27 04:52:06,463 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 04:52:06,811 Running on GPU
2024-07-27 04:52:10,367 Found 6 citations for tools or databases
2024-07-27 04:52:10,367 Query 1/1: NR1D2_KLHDC2 (length 986)
2024-07-27 04:52:10,837 Sleeping for 5s. Reason: PENDING
2024-07-27 04:52:16,262 Sleeping for 5s. Reason: PENDING
2024-07-27 04:52:21,682 Sleeping for 10s. Reason: PENDING
2024-07-27 04:52:32,129 Sleeping for 7s. Reason: RUNNING
2024-07-27 04:52:39,554 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:52:45,022 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:52:50,462 Sleeping for 6s. Reason: RUNNING
2024-07-27 04:52:56,894 Sleeping for 6s. Reason: RUNNING
2024-07-27 04:53:03,306 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:53:12,739 Sleeping for 8s. Reason: RUNNING
2024-07-27 04:53:21,172 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:53:30,611 Sleeping for 10s. Reason: RUNNING
2024-07-27 04:53:41,039 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:53:46,471 Sleeping for 10s. Reason: RUNNING
2024-07-27 04:53:56,888 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:54:02,328 Sleeping for 8s. Reason: RUNNING
2024-07-27 04:54:10,763 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:54:20,178 Sleeping for 6s. Reason: RUNNING
2024-07-27 04:54:26,608 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:54:32,027 Sleeping for 6s. Reason: RUNNING
2024-07-27 04:54:38,456 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:54:49,605 Sleeping for 7s. Reason: PENDING
2024-07-27 04:54:57,025 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:55:02,451 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:55:11,875 Sleeping for 10s. Reason: RUNNING
2024-07-27 04:55:22,309 Sleeping for 10s. Reason: RUNNING
2024-07-27 04:55:32,776 Sleeping for 8s. Reason: RUNNING
2024-07-27 04:55:41,199 Sleeping for 8s. Reason: RUNNING
2024-07-27 04:55:49,609 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:55:58,798 Setting max_seq=508, max_extra_seq=2048
2024-07-27 04:59:45,735 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.3 pTM=0.461 ipTM=0.196
2024-07-27 05:00:11,210 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.3 pTM=0.447 ipTM=0.195 tol=7.88
2024-07-27 05:00:36,785 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.8 pTM=0.447 ipTM=0.188 tol=6.28
2024-07-27 05:01:02,451 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60 pTM=0.447 ipTM=0.189 tol=4.13
2024-07-27 05:01:28,170 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.1 pTM=0.455 ipTM=0.209 tol=4.35
2024-07-27 05:01:53,920 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.1 pTM=0.456 ipTM=0.191 tol=3.03
2024-07-27 05:02:19,697 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.9 pTM=0.453 ipTM=0.198 tol=1.68
2024-07-27 05:02:45,494 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.1 pTM=0.454 ipTM=0.211 tol=1.59
2024-07-27 05:03:11,321 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.1 pTM=0.454 ipTM=0.202 tol=4.97
2024-07-27 05:03:37,137 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.2 pTM=0.454 ipTM=0.205 tol=1.84
2024-07-27 05:04:02,958 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.2 pTM=0.452 ipTM=0.202 tol=2.09
2024-07-27 05:04:28,784 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.1 pTM=0.453 ipTM=0.212 tol=1.91
2024-07-27 05:04:54,613 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.1 pTM=0.453 ipTM=0.204 tol=2.25
2024-07-27 05:05:20,442 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.2 pTM=0.458 ipTM=0.211 tol=2.47
2024-07-27 05:05:46,277 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.1 pTM=0.458 ipTM=0.195 tol=1.38
2024-07-27 05:06:12,124 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60 pTM=0.458 ipTM=0.211 tol=1.11
2024-07-27 05:06:37,962 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.2 pTM=0.456 ipTM=0.204 tol=1.38
2024-07-27 05:07:03,779 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.2 pTM=0.456 ipTM=0.205 tol=1.64
2024-07-27 05:07:29,591 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.2 pTM=0.455 ipTM=0.197 tol=1.44
2024-07-27 05:07:55,369 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.457 ipTM=0.211 tol=1.41
2024-07-27 05:08:21,143 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.3 pTM=0.457 ipTM=0.198 tol=1.41
2024-07-27 05:08:46,919 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.1 pTM=0.454 ipTM=0.212 tol=1.51
2024-07-27 05:09:12,696 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.454 ipTM=0.201 tol=1.73
2024-07-27 05:09:38,460 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.3 pTM=0.454 ipTM=0.224 tol=1.6
2024-07-27 05:10:04,236 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.4 pTM=0.454 ipTM=0.204 tol=1.24
2024-07-27 05:10:30,017 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.3 pTM=0.456 ipTM=0.224 tol=2.18
2024-07-27 05:10:55,802 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.3 pTM=0.454 ipTM=0.198 tol=1.19
2024-07-27 05:11:21,595 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.3 pTM=0.453 ipTM=0.216 tol=2.19
2024-07-27 05:11:47,374 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.4 pTM=0.454 ipTM=0.201 tol=1.39
2024-07-27 05:12:13,158 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.3 pTM=0.456 ipTM=0.215 tol=1.45
2024-07-27 05:12:38,943 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.5 pTM=0.457 ipTM=0.198 tol=1.87
2024-07-27 05:12:38,944 alphafold2_multimer_v3_model_1_seed_000 took 993.3s (30 recycles)
2024-07-27 05:13:05,501 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.4 pTM=0.459 ipTM=0.206
2024-07-27 05:13:31,371 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.5 pTM=0.465 ipTM=0.26 tol=7.57
2024-07-27 05:13:57,244 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.8 pTM=0.47 ipTM=0.31 tol=5.78
2024-07-27 05:14:23,118 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.9 pTM=0.462 ipTM=0.279 tol=2.46
2024-07-27 05:14:49,025 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62 pTM=0.473 ipTM=0.306 tol=4.09
2024-07-27 05:15:14,936 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.2 pTM=0.471 ipTM=0.281 tol=3.75
2024-07-27 05:15:40,804 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.2 pTM=0.465 ipTM=0.271 tol=4.04
2024-07-27 05:16:06,683 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.4 pTM=0.467 ipTM=0.275 tol=2.02
2024-07-27 05:16:32,548 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.5 pTM=0.467 ipTM=0.274 tol=1.82
2024-07-27 05:16:58,427 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.6 pTM=0.467 ipTM=0.265 tol=1.93
2024-07-27 05:17:24,329 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.6 pTM=0.469 ipTM=0.27 tol=1.83
2024-07-27 05:17:50,210 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.7 pTM=0.469 ipTM=0.266 tol=1.6
2024-07-27 05:18:16,081 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.47 ipTM=0.264 tol=1.71
2024-07-27 05:18:41,941 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.468 ipTM=0.264 tol=1.18
2024-07-27 05:19:07,857 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.6 pTM=0.47 ipTM=0.263 tol=1.66
2024-07-27 05:19:33,737 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.5 pTM=0.467 ipTM=0.26 tol=2.59
2024-07-27 05:19:59,600 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.7 pTM=0.47 ipTM=0.264 tol=2.21
2024-07-27 05:20:25,499 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.5 pTM=0.466 ipTM=0.263 tol=1.8
2024-07-27 05:20:51,369 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.6 pTM=0.471 ipTM=0.261 tol=1.7
2024-07-27 05:21:17,208 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.3 pTM=0.467 ipTM=0.246 tol=1.75
2024-07-27 05:21:43,043 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.4 pTM=0.469 ipTM=0.267 tol=0.921
2024-07-27 05:22:08,895 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.2 pTM=0.467 ipTM=0.258 tol=1.3
2024-07-27 05:22:34,741 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.3 pTM=0.47 ipTM=0.262 tol=1.1
2024-07-27 05:23:00,594 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.3 pTM=0.466 ipTM=0.262 tol=1.24
2024-07-27 05:23:26,449 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.4 pTM=0.47 ipTM=0.316 tol=3.63
2024-07-27 05:23:52,300 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.4 pTM=0.466 ipTM=0.257 tol=2.79
2024-07-27 05:24:18,138 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.1 pTM=0.469 ipTM=0.266 tol=2.55
2024-07-27 05:24:43,981 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.3 pTM=0.468 ipTM=0.272 tol=3
2024-07-27 05:25:09,811 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.3 pTM=0.466 ipTM=0.268 tol=1.73
2024-07-27 05:25:35,673 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.4 pTM=0.465 ipTM=0.266 tol=1.89
2024-07-27 05:26:01,501 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.5 pTM=0.466 ipTM=0.269 tol=2.44
2024-07-27 05:26:01,502 alphafold2_multimer_v3_model_2_seed_000 took 801.8s (30 recycles)
2024-07-27 05:26:28,115 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.8 pTM=0.459 ipTM=0.3
2024-07-27 05:26:54,025 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.7 pTM=0.455 ipTM=0.216 tol=10.8
2024-07-27 05:27:19,928 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.1 pTM=0.448 ipTM=0.179 tol=11.4
2024-07-27 05:27:45,819 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.9 pTM=0.456 ipTM=0.238 tol=10.8
2024-07-27 05:28:11,744 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.7 pTM=0.448 ipTM=0.177 tol=11.6
2024-07-27 05:28:37,651 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.8 pTM=0.461 ipTM=0.227 tol=13
2024-07-27 05:29:03,586 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.448 ipTM=0.177 tol=11.6
2024-07-27 05:29:29,541 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.8 pTM=0.456 ipTM=0.217 tol=9.59
2024-07-27 05:29:55,525 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61 pTM=0.445 ipTM=0.173 tol=11.4
2024-07-27 05:30:21,505 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.4 pTM=0.444 ipTM=0.171 tol=7.89
2024-07-27 05:30:47,462 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.1 pTM=0.449 ipTM=0.18 tol=10.4
2024-07-27 05:31:13,415 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61 pTM=0.447 ipTM=0.176 tol=6.59
2024-07-27 05:31:39,358 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.1 pTM=0.448 ipTM=0.178 tol=5.75
2024-07-27 05:32:05,308 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61 pTM=0.446 ipTM=0.175 tol=8.49
2024-07-27 05:32:31,235 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.1 pTM=0.45 ipTM=0.182 tol=9.72
2024-07-27 05:32:57,163 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.9 pTM=0.449 ipTM=0.18 tol=8.2
2024-07-27 05:33:23,063 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.1 pTM=0.452 ipTM=0.192 tol=8.86
2024-07-27 05:33:49,003 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.2 pTM=0.449 ipTM=0.179 tol=8.77
2024-07-27 05:34:14,918 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.1 pTM=0.451 ipTM=0.183 tol=7.99
2024-07-27 05:34:40,874 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.2 pTM=0.449 ipTM=0.18 tol=9.04
2024-07-27 05:35:06,794 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.1 pTM=0.449 ipTM=0.179 tol=8.98
2024-07-27 05:35:32,764 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61 pTM=0.448 ipTM=0.178 tol=8.82
2024-07-27 05:35:58,684 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61 pTM=0.452 ipTM=0.184 tol=9.2
2024-07-27 05:36:24,627 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.2 pTM=0.45 ipTM=0.181 tol=8.73
2024-07-27 05:36:50,540 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.1 pTM=0.455 ipTM=0.194 tol=9.47
2024-07-27 05:37:16,487 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.4 pTM=0.45 ipTM=0.18 tol=8.88
2024-07-27 05:37:42,389 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.2 pTM=0.455 ipTM=0.194 tol=9.02
2024-07-27 05:38:08,324 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61 pTM=0.45 ipTM=0.182 tol=10.1
2024-07-27 05:38:34,197 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.1 pTM=0.457 ipTM=0.202 tol=9.77
2024-07-27 05:39:00,127 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.1 pTM=0.452 ipTM=0.184 tol=9.09
2024-07-27 05:39:26,044 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.4 pTM=0.454 ipTM=0.187 tol=6.28
2024-07-27 05:39:26,045 alphafold2_multimer_v3_model_3_seed_000 took 803.8s (30 recycles)
2024-07-27 05:39:52,652 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.45 ipTM=0.19
2024-07-27 05:40:18,575 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60 pTM=0.465 ipTM=0.329 tol=16.9
2024-07-27 05:40:44,451 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61 pTM=0.484 ipTM=0.3 tol=15.5
2024-07-27 05:41:10,362 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.2 pTM=0.46 ipTM=0.224 tol=8.07
2024-07-27 05:41:36,288 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.6 pTM=0.441 ipTM=0.176 tol=7.54
2024-07-27 05:42:02,198 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.6 pTM=0.448 ipTM=0.208 tol=10.9
2024-07-27 05:42:28,090 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.3 pTM=0.44 ipTM=0.179 tol=9.02
2024-07-27 05:42:53,992 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.5 pTM=0.45 ipTM=0.234 tol=7.86
2024-07-27 05:43:19,886 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.5 pTM=0.442 ipTM=0.175 tol=8.02
2024-07-27 05:43:45,804 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60 pTM=0.443 ipTM=0.182 tol=6.62
2024-07-27 05:44:11,688 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.5 pTM=0.447 ipTM=0.23 tol=4.78
2024-07-27 05:44:37,592 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60 pTM=0.445 ipTM=0.229 tol=3.88
2024-07-27 05:45:03,468 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.9 pTM=0.443 ipTM=0.183 tol=4.17
2024-07-27 05:45:29,355 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.8 pTM=0.442 ipTM=0.175 tol=2.64
2024-07-27 05:45:55,263 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.8 pTM=0.443 ipTM=0.178 tol=2.12
2024-07-27 05:46:21,194 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.6 pTM=0.444 ipTM=0.176 tol=3.22
2024-07-27 05:46:47,097 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.8 pTM=0.442 ipTM=0.172 tol=3.12
2024-07-27 05:47:12,971 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.9 pTM=0.445 ipTM=0.194 tol=3.98
2024-07-27 05:47:38,851 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.9 pTM=0.439 ipTM=0.172 tol=5.11
2024-07-27 05:48:04,736 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.9 pTM=0.443 ipTM=0.172 tol=3.18
2024-07-27 05:48:30,613 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.9 pTM=0.441 ipTM=0.168 tol=3.14
2024-07-27 05:48:56,514 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.1 pTM=0.44 ipTM=0.172 tol=5.52
2024-07-27 05:49:22,420 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.8 pTM=0.442 ipTM=0.225 tol=8.48
2024-07-27 05:49:48,336 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.1 pTM=0.44 ipTM=0.168 tol=4.68
2024-07-27 05:50:14,227 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.9 pTM=0.442 ipTM=0.188 tol=4
2024-07-27 05:50:40,115 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.2 pTM=0.441 ipTM=0.17 tol=2.87
2024-07-27 05:51:06,000 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.9 pTM=0.446 ipTM=0.227 tol=5.53
2024-07-27 05:51:31,898 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.2 pTM=0.442 ipTM=0.173 tol=6.21
2024-07-27 05:51:57,805 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60 pTM=0.441 ipTM=0.171 tol=3.89
2024-07-27 05:52:23,695 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.8 pTM=0.442 ipTM=0.176 tol=2.32
2024-07-27 05:52:49,588 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.9 pTM=0.443 ipTM=0.173 tol=4.48
2024-07-27 05:52:49,589 alphafold2_multimer_v3_model_4_seed_000 took 802.8s (30 recycles)
2024-07-27 05:53:16,242 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.4 pTM=0.452 ipTM=0.238
2024-07-27 05:53:42,215 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.1 pTM=0.449 ipTM=0.245 tol=8.81
2024-07-27 05:54:08,161 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.7 pTM=0.475 ipTM=0.3 tol=7.45
2024-07-27 05:54:34,081 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60 pTM=0.47 ipTM=0.226 tol=8.51
2024-07-27 05:55:00,020 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.7 pTM=0.461 ipTM=0.199 tol=5.41
2024-07-27 05:55:25,937 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.6 pTM=0.459 ipTM=0.195 tol=6.81
2024-07-27 05:55:51,851 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61 pTM=0.456 ipTM=0.191 tol=9.98
2024-07-27 05:56:17,731 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.4 pTM=0.465 ipTM=0.206 tol=3.6
2024-07-27 05:56:43,617 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.4 pTM=0.464 ipTM=0.242 tol=2.99
2024-07-27 05:57:09,507 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.5 pTM=0.464 ipTM=0.253 tol=5.47
2024-07-27 05:57:35,383 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.4 pTM=0.459 ipTM=0.24 tol=4.79
2024-07-27 05:58:01,285 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.5 pTM=0.463 ipTM=0.247 tol=3.33
2024-07-27 05:58:27,168 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.2 pTM=0.457 ipTM=0.247 tol=2.5
2024-07-27 05:58:53,039 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.4 pTM=0.46 ipTM=0.241 tol=1.61
2024-07-27 05:59:18,919 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.6 pTM=0.472 ipTM=0.24 tol=1.83
2024-07-27 05:59:44,805 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.3 pTM=0.457 ipTM=0.224 tol=2.21
2024-07-27 06:00:10,674 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.7 pTM=0.465 ipTM=0.25 tol=2.44
2024-07-27 06:00:36,532 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.9 pTM=0.48 ipTM=0.279 tol=2.95
2024-07-27 06:01:02,412 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.5 pTM=0.465 ipTM=0.237 tol=2.5
2024-07-27 06:01:28,293 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.9 pTM=0.467 ipTM=0.231 tol=2.96
2024-07-27 06:01:54,162 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.7 pTM=0.47 ipTM=0.219 tol=2.54
2024-07-27 06:02:20,057 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.2 pTM=0.454 ipTM=0.25 tol=2.55
2024-07-27 06:02:45,944 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.8 pTM=0.466 ipTM=0.257 tol=2.57
2024-07-27 06:03:11,797 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.4 pTM=0.49 ipTM=0.28 tol=2.77
2024-07-27 06:03:37,650 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.9 pTM=0.475 ipTM=0.271 tol=2.13
2024-07-27 06:04:03,523 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.6 pTM=0.457 ipTM=0.272 tol=1.88
2024-07-27 06:04:29,396 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.6 pTM=0.469 ipTM=0.225 tol=1.9
2024-07-27 06:04:55,294 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.2 pTM=0.454 ipTM=0.216 tol=2.27
2024-07-27 06:05:21,207 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.3 pTM=0.45 ipTM=0.262 tol=2.82
2024-07-27 06:05:47,099 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.1 pTM=0.457 ipTM=0.246 tol=2.98
2024-07-27 06:06:12,995 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.1 pTM=0.463 ipTM=0.222 tol=2.38
2024-07-27 06:06:12,996 alphafold2_multimer_v3_model_5_seed_000 took 802.6s (30 recycles)
2024-07-27 06:06:13,759 reranking models by 'multimer' metric
2024-07-27 06:06:17,074 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 06:08:22,990 Relaxation took 129.2s
2024-07-27 06:08:22,990 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.5 pTM=0.466 ipTM=0.269
2024-07-27 06:10:31,801 Relaxation took 128.8s
2024-07-27 06:10:31,801 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.1 pTM=0.463 ipTM=0.222
2024-07-27 06:12:55,464 Relaxation took 143.7s
2024-07-27 06:12:55,464 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.5 pTM=0.457 ipTM=0.198
2024-07-27 06:15:56,221 Relaxation took 180.8s
2024-07-27 06:15:56,221 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.4 pTM=0.454 ipTM=0.187
2024-07-27 06:17:35,820 Relaxation took 99.6s
2024-07-27 06:17:35,821 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.9 pTM=0.443 ipTM=0.173
2024-07-27 06:17:38,013 Done