2024-07-27 04:58:51,213 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 04:58:51,544 Running on GPU
2024-07-27 04:58:55,378 Found 6 citations for tools or databases
2024-07-27 04:58:55,379 Query 1/1: NR1D2_SOCS3 (length 805)
2024-07-27 04:58:55,834 Sleeping for 7s. Reason: PENDING
2024-07-27 04:59:03,268 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:59:08,697 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:59:18,109 Sleeping for 8s. Reason: RUNNING
2024-07-27 04:59:26,544 Sleeping for 9s. Reason: RUNNING
2024-07-27 04:59:35,961 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:59:41,388 Sleeping for 5s. Reason: RUNNING
2024-07-27 04:59:46,810 Sleeping for 7s. Reason: RUNNING
2024-07-27 04:59:54,209 Sleeping for 6s. Reason: RUNNING
2024-07-27 05:00:00,627 Sleeping for 9s. Reason: RUNNING
2024-07-27 05:00:10,066 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:00:15,481 Sleeping for 9s. Reason: RUNNING
2024-07-27 05:00:26,676 Sleeping for 7s. Reason: PENDING
2024-07-27 05:00:34,179 Sleeping for 6s. Reason: RUNNING
2024-07-27 05:00:40,598 Sleeping for 9s. Reason: RUNNING
2024-07-27 05:00:50,014 Sleeping for 10s. Reason: RUNNING
2024-07-27 05:01:00,437 Sleeping for 10s. Reason: RUNNING
2024-07-27 05:01:10,857 Sleeping for 9s. Reason: RUNNING
2024-07-27 05:01:23,319 Setting max_seq=508, max_extra_seq=2048
2024-07-27 05:04:50,890 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.3 pTM=0.358 ipTM=0.16
2024-07-27 05:05:03,948 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.9 pTM=0.366 ipTM=0.184 tol=7.58
2024-07-27 05:05:17,047 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.8 pTM=0.364 ipTM=0.158 tol=4.88
2024-07-27 05:05:30,174 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.1 pTM=0.368 ipTM=0.17 tol=4.02
2024-07-27 05:05:43,315 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.9 pTM=0.368 ipTM=0.179 tol=2.98
2024-07-27 05:05:56,482 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.2 pTM=0.371 ipTM=0.191 tol=3.41
2024-07-27 05:06:09,649 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.2 pTM=0.372 ipTM=0.205 tol=3.99
2024-07-27 05:06:22,833 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.1 pTM=0.37 ipTM=0.19 tol=4.87
2024-07-27 05:06:36,038 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.6 pTM=0.372 ipTM=0.194 tol=3.29
2024-07-27 05:06:49,259 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.5 pTM=0.37 ipTM=0.189 tol=4.11
2024-07-27 05:07:02,478 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.5 pTM=0.375 ipTM=0.201 tol=4.16
2024-07-27 05:07:15,711 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.2 pTM=0.369 ipTM=0.205 tol=3.98
2024-07-27 05:07:28,950 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.4 pTM=0.37 ipTM=0.202 tol=3.6
2024-07-27 05:07:42,174 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.6 pTM=0.373 ipTM=0.204 tol=3.62
2024-07-27 05:07:55,420 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.8 pTM=0.367 ipTM=0.198 tol=4.82
2024-07-27 05:08:08,670 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.2 pTM=0.378 ipTM=0.205 tol=6.66
2024-07-27 05:08:21,919 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.7 pTM=0.373 ipTM=0.194 tol=4.29
2024-07-27 05:08:35,163 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.9 pTM=0.376 ipTM=0.205 tol=3.48
2024-07-27 05:08:48,405 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.8 pTM=0.373 ipTM=0.192 tol=2.67
2024-07-27 05:09:01,653 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.8 pTM=0.375 ipTM=0.199 tol=3.49
2024-07-27 05:09:14,893 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.8 pTM=0.373 ipTM=0.186 tol=3.3
2024-07-27 05:09:28,153 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.4 pTM=0.371 ipTM=0.184 tol=3.56
2024-07-27 05:09:41,410 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.4 pTM=0.37 ipTM=0.177 tol=3.36
2024-07-27 05:09:54,670 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.4 pTM=0.372 ipTM=0.188 tol=3.07
2024-07-27 05:10:07,922 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.7 pTM=0.371 ipTM=0.184 tol=5.57
2024-07-27 05:10:21,176 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.6 pTM=0.373 ipTM=0.195 tol=2.66
2024-07-27 05:10:34,431 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.6 pTM=0.373 ipTM=0.192 tol=3.45
2024-07-27 05:10:47,676 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.7 pTM=0.374 ipTM=0.193 tol=1.64
2024-07-27 05:11:00,922 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.3 pTM=0.373 ipTM=0.192 tol=2.83
2024-07-27 05:11:14,163 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.4 pTM=0.372 ipTM=0.187 tol=2.34
2024-07-27 05:11:27,399 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.8 pTM=0.371 ipTM=0.182 tol=3.5
2024-07-27 05:11:27,400 alphafold2_multimer_v3_model_1_seed_000 took 599.0s (30 recycles)
2024-07-27 05:11:41,063 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.2 pTM=0.366 ipTM=0.161
2024-07-27 05:11:54,346 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.4 pTM=0.366 ipTM=0.157 tol=13.9
2024-07-27 05:12:07,623 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.7 pTM=0.371 ipTM=0.164 tol=11.5
2024-07-27 05:12:20,902 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.4 pTM=0.37 ipTM=0.161 tol=5.42
2024-07-27 05:12:34,180 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.6 pTM=0.372 ipTM=0.169 tol=3.85
2024-07-27 05:12:47,456 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.3 pTM=0.37 ipTM=0.163 tol=5.38
2024-07-27 05:13:00,739 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.4 pTM=0.371 ipTM=0.167 tol=4.1
2024-07-27 05:13:14,034 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52 pTM=0.371 ipTM=0.166 tol=2.09
2024-07-27 05:13:27,337 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.8 pTM=0.371 ipTM=0.519 tol=7.79
2024-07-27 05:13:40,623 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53 pTM=0.371 ipTM=0.488 tol=3.17
2024-07-27 05:13:53,929 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.1 pTM=0.37 ipTM=0.475 tol=1.67
2024-07-27 05:14:07,229 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.9 pTM=0.37 ipTM=0.427 tol=1.35
2024-07-27 05:14:20,524 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.5 pTM=0.371 ipTM=0.348 tol=1.48
2024-07-27 05:14:33,824 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53 pTM=0.371 ipTM=0.518 tol=1.3
2024-07-27 05:14:47,134 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53 pTM=0.369 ipTM=0.468 tol=1.39
2024-07-27 05:15:00,450 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.1 pTM=0.37 ipTM=0.502 tol=0.997
2024-07-27 05:15:13,767 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.1 pTM=0.371 ipTM=0.468 tol=1.17
2024-07-27 05:15:27,066 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.1 pTM=0.371 ipTM=0.482 tol=0.903
2024-07-27 05:15:40,362 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.7 pTM=0.371 ipTM=0.431 tol=1.24
2024-07-27 05:15:53,672 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.2 pTM=0.372 ipTM=0.54 tol=1.98
2024-07-27 05:16:06,968 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.1 pTM=0.37 ipTM=0.557 tol=1.98
2024-07-27 05:16:20,284 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.1 pTM=0.371 ipTM=0.553 tol=1.65
2024-07-27 05:16:33,576 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.1 pTM=0.37 ipTM=0.56 tol=1.25
2024-07-27 05:16:46,851 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.2 pTM=0.371 ipTM=0.571 tol=0.964
2024-07-27 05:17:00,149 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.3 pTM=0.37 ipTM=0.581 tol=1.64
2024-07-27 05:17:13,443 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.2 pTM=0.371 ipTM=0.575 tol=2.07
2024-07-27 05:17:26,748 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.9 pTM=0.372 ipTM=0.576 tol=1.86
2024-07-27 05:17:40,066 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.5 pTM=0.369 ipTM=0.581 tol=1.75
2024-07-27 05:17:53,369 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.7 pTM=0.371 ipTM=0.588 tol=3.36
2024-07-27 05:18:06,654 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.372 ipTM=0.584 tol=4.19
2024-07-27 05:18:19,985 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54 pTM=0.368 ipTM=0.584 tol=5.77
2024-07-27 05:18:19,986 alphafold2_multimer_v3_model_2_seed_000 took 412.2s (30 recycles)
2024-07-27 05:18:33,721 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.8 pTM=0.356 ipTM=0.156
2024-07-27 05:18:47,042 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.2 pTM=0.365 ipTM=0.491 tol=8.68
2024-07-27 05:19:00,385 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.4 pTM=0.37 ipTM=0.462 tol=4.33
2024-07-27 05:19:13,691 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.9 pTM=0.375 ipTM=0.462 tol=2.96
2024-07-27 05:19:27,011 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52 pTM=0.371 ipTM=0.463 tol=2.26
2024-07-27 05:19:40,335 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.3 pTM=0.374 ipTM=0.462 tol=3
2024-07-27 05:19:53,677 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.1 pTM=0.373 ipTM=0.471 tol=7.2
2024-07-27 05:20:07,003 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.7 pTM=0.377 ipTM=0.451 tol=5.02
2024-07-27 05:20:20,334 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.2 pTM=0.372 ipTM=0.465 tol=3.18
2024-07-27 05:20:33,655 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.2 pTM=0.373 ipTM=0.466 tol=2.9
2024-07-27 05:20:46,984 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.6 pTM=0.385 ipTM=0.463 tol=4.06
2024-07-27 05:21:00,298 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.2 pTM=0.383 ipTM=0.465 tol=2.84
2024-07-27 05:21:13,609 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.3 pTM=0.387 ipTM=0.452 tol=2.5
2024-07-27 05:21:26,949 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.2 pTM=0.38 ipTM=0.465 tol=1.99
2024-07-27 05:21:40,279 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52 pTM=0.375 ipTM=0.448 tol=2.51
2024-07-27 05:21:53,612 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51 pTM=0.38 ipTM=0.43 tol=3.09
2024-07-27 05:22:06,952 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.8 pTM=0.377 ipTM=0.447 tol=2.42
2024-07-27 05:22:20,283 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.2 pTM=0.383 ipTM=0.448 tol=2.38
2024-07-27 05:22:33,629 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.5 pTM=0.379 ipTM=0.43 tol=5.37
2024-07-27 05:22:46,958 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.6 pTM=0.377 ipTM=0.432 tol=4.72
2024-07-27 05:23:00,292 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=51.2 pTM=0.379 ipTM=0.458 tol=4.04
2024-07-27 05:23:13,604 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.1 pTM=0.389 ipTM=0.452 tol=4.24
2024-07-27 05:23:26,952 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=51.4 pTM=0.374 ipTM=0.44 tol=5.67
2024-07-27 05:23:40,292 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=51.6 pTM=0.378 ipTM=0.452 tol=5.52
2024-07-27 05:23:53,616 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.2 pTM=0.371 ipTM=0.469 tol=5.18
2024-07-27 05:24:06,967 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.7 pTM=0.37 ipTM=0.453 tol=5.51
2024-07-27 05:24:20,313 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.2 pTM=0.375 ipTM=0.46 tol=5.15
2024-07-27 05:24:33,653 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.6 pTM=0.38 ipTM=0.459 tol=4.85
2024-07-27 05:24:46,978 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.2 pTM=0.377 ipTM=0.46 tol=3.97
2024-07-27 05:25:00,314 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.5 pTM=0.383 ipTM=0.469 tol=5.14
2024-07-27 05:25:13,660 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.6 pTM=0.372 ipTM=0.463 tol=4.81
2024-07-27 05:25:13,661 alphafold2_multimer_v3_model_3_seed_000 took 413.3s (30 recycles)
2024-07-27 05:25:27,355 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.5 pTM=0.365 ipTM=0.185
2024-07-27 05:25:40,640 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.5 pTM=0.386 ipTM=0.224 tol=14.2
2024-07-27 05:25:53,917 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.7 pTM=0.382 ipTM=0.218 tol=8.02
2024-07-27 05:26:07,211 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.5 pTM=0.381 ipTM=0.211 tol=4.41
2024-07-27 05:26:20,502 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.5 pTM=0.379 ipTM=0.206 tol=3.86
2024-07-27 05:26:33,803 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.5 pTM=0.382 ipTM=0.21 tol=4.26
2024-07-27 05:26:47,095 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.5 pTM=0.379 ipTM=0.203 tol=3.15
2024-07-27 05:27:00,377 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50 pTM=0.384 ipTM=0.222 tol=4.89
2024-07-27 05:27:13,674 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.4 pTM=0.38 ipTM=0.209 tol=4.07
2024-07-27 05:27:26,950 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.1 pTM=0.381 ipTM=0.208 tol=4.59
2024-07-27 05:27:40,241 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49 pTM=0.377 ipTM=0.203 tol=4.49
2024-07-27 05:27:53,542 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.4 pTM=0.381 ipTM=0.214 tol=3.7
2024-07-27 05:28:06,833 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.1 pTM=0.38 ipTM=0.207 tol=3.47
2024-07-27 05:28:20,124 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.6 pTM=0.385 ipTM=0.227 tol=3.49
2024-07-27 05:28:33,406 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.9 pTM=0.382 ipTM=0.219 tol=3.14
2024-07-27 05:28:46,694 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.1 pTM=0.395 ipTM=0.254 tol=5.41
2024-07-27 05:28:59,990 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.9 pTM=0.389 ipTM=0.243 tol=3.75
2024-07-27 05:29:13,266 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.8 pTM=0.393 ipTM=0.249 tol=3.86
2024-07-27 05:29:26,553 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.9 pTM=0.39 ipTM=0.241 tol=3.08
2024-07-27 05:29:39,833 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.7 pTM=0.398 ipTM=0.269 tol=3.67
2024-07-27 05:29:53,085 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.6 pTM=0.386 ipTM=0.23 tol=4.96
2024-07-27 05:30:06,360 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.5 pTM=0.389 ipTM=0.241 tol=5.3
2024-07-27 05:30:19,625 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.8 pTM=0.385 ipTM=0.226 tol=3.96
2024-07-27 05:30:32,891 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.9 pTM=0.397 ipTM=0.254 tol=3.36
2024-07-27 05:30:46,173 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.9 pTM=0.382 ipTM=0.219 tol=2.76
2024-07-27 05:30:59,450 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.8 pTM=0.387 ipTM=0.227 tol=3.19
2024-07-27 05:31:12,730 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.9 pTM=0.385 ipTM=0.227 tol=3.8
2024-07-27 05:31:26,003 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.1 pTM=0.389 ipTM=0.241 tol=3.7
2024-07-27 05:31:39,277 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.7 pTM=0.385 ipTM=0.231 tol=4.06
2024-07-27 05:31:52,554 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.7 pTM=0.393 ipTM=0.253 tol=3.26
2024-07-27 05:32:05,825 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.9 pTM=0.388 ipTM=0.249 tol=4.44
2024-07-27 05:32:05,825 alphafold2_multimer_v3_model_4_seed_000 took 411.8s (30 recycles)
2024-07-27 05:32:19,564 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.4 pTM=0.364 ipTM=0.18
2024-07-27 05:32:32,869 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.1 pTM=0.372 ipTM=0.201 tol=15.5
2024-07-27 05:32:46,219 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.6 pTM=0.359 ipTM=0.151 tol=12.2
2024-07-27 05:32:59,580 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.4 pTM=0.361 ipTM=0.176 tol=6.62
2024-07-27 05:33:12,926 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.8 pTM=0.363 ipTM=0.154 tol=4.24
2024-07-27 05:33:26,270 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.7 pTM=0.362 ipTM=0.16 tol=4.74
2024-07-27 05:33:39,600 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.2 pTM=0.361 ipTM=0.158 tol=3.67
2024-07-27 05:33:52,945 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.2 pTM=0.362 ipTM=0.153 tol=3.04
2024-07-27 05:34:06,260 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.2 pTM=0.363 ipTM=0.151 tol=5.25
2024-07-27 05:34:19,581 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.3 pTM=0.361 ipTM=0.157 tol=4.49
2024-07-27 05:34:32,877 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.5 pTM=0.36 ipTM=0.175 tol=3.47
2024-07-27 05:34:46,174 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.6 pTM=0.359 ipTM=0.153 tol=3.07
2024-07-27 05:34:59,508 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.2 pTM=0.361 ipTM=0.151 tol=3.04
2024-07-27 05:35:12,841 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.3 pTM=0.361 ipTM=0.154 tol=2.61
2024-07-27 05:35:26,186 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.3 pTM=0.361 ipTM=0.161 tol=3.3
2024-07-27 05:35:39,540 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.2 pTM=0.362 ipTM=0.154 tol=4.6
2024-07-27 05:35:52,873 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.7 pTM=0.364 ipTM=0.157 tol=3.12
2024-07-27 05:36:06,226 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.7 pTM=0.362 ipTM=0.154 tol=3.93
2024-07-27 05:36:19,565 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.9 pTM=0.364 ipTM=0.159 tol=3.54
2024-07-27 05:36:32,886 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.1 pTM=0.363 ipTM=0.16 tol=2.43
2024-07-27 05:36:46,199 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.2 pTM=0.361 ipTM=0.155 tol=3.47
2024-07-27 05:36:59,518 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.1 pTM=0.361 ipTM=0.155 tol=1.8
2024-07-27 05:37:12,829 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.8 pTM=0.362 ipTM=0.158 tol=2.93
2024-07-27 05:37:26,164 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.8 pTM=0.364 ipTM=0.161 tol=3.61
2024-07-27 05:37:39,474 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.6 pTM=0.361 ipTM=0.156 tol=5.08
2024-07-27 05:37:52,793 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53 pTM=0.361 ipTM=0.155 tol=2.58
2024-07-27 05:38:06,102 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.1 pTM=0.36 ipTM=0.154 tol=4.23
2024-07-27 05:38:19,411 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.5 pTM=0.361 ipTM=0.169 tol=4.03
2024-07-27 05:38:32,738 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.4 pTM=0.361 ipTM=0.154 tol=4.2
2024-07-27 05:38:46,041 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.2 pTM=0.36 ipTM=0.151 tol=3.41
2024-07-27 05:38:59,350 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.2 pTM=0.361 ipTM=0.155 tol=3.68
2024-07-27 05:38:59,351 alphafold2_multimer_v3_model_5_seed_000 took 413.1s (30 recycles)
2024-07-27 05:38:59,765 reranking models by 'multimer' metric
2024-07-27 05:39:02,997 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 05:40:13,271 Relaxation took 73.5s
2024-07-27 05:40:13,271 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54 pTM=0.368 ipTM=0.584
2024-07-27 05:41:50,582 Relaxation took 97.3s
2024-07-27 05:41:50,582 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.6 pTM=0.372 ipTM=0.463
2024-07-27 05:43:16,432 Relaxation took 85.8s
2024-07-27 05:43:16,432 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.9 pTM=0.388 ipTM=0.249
2024-07-27 05:44:29,492 Relaxation took 73.1s
2024-07-27 05:44:29,492 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.8 pTM=0.371 ipTM=0.182
2024-07-27 05:45:55,845 Relaxation took 86.4s
2024-07-27 05:45:55,845 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.2 pTM=0.361 ipTM=0.155
2024-07-27 05:45:57,273 Done