2024-07-27 05:03:43,321 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 05:03:43,650 Running on GPU
2024-07-27 05:03:47,168 Found 6 citations for tools or databases
2024-07-27 05:03:47,169 Query 1/1: NR1D2_SOCS6 (length 1161)
2024-07-27 05:03:47,617 Sleeping for 8s. Reason: PENDING
2024-07-27 05:03:56,051 Sleeping for 6s. Reason: RUNNING
2024-07-27 05:04:02,464 Sleeping for 7s. Reason: RUNNING
2024-07-27 05:04:09,902 Sleeping for 10s. Reason: RUNNING
2024-07-27 05:04:20,339 Sleeping for 8s. Reason: RUNNING
2024-07-27 05:04:28,751 Sleeping for 9s. Reason: RUNNING
2024-07-27 05:04:38,189 Sleeping for 8s. Reason: RUNNING
2024-07-27 05:04:46,604 Sleeping for 8s. Reason: RUNNING
2024-07-27 05:04:55,064 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:05:00,481 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:05:05,897 Sleeping for 7s. Reason: RUNNING
2024-07-27 05:05:13,328 Sleeping for 8s. Reason: RUNNING
2024-07-27 05:05:23,514 Sleeping for 7s. Reason: PENDING
2024-07-27 05:05:30,955 Sleeping for 6s. Reason: RUNNING
2024-07-27 05:05:37,385 Sleeping for 7s. Reason: RUNNING
2024-07-27 05:05:44,828 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:05:50,248 Sleeping for 6s. Reason: RUNNING
2024-07-27 05:05:56,676 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:06:02,096 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:06:07,509 Sleeping for 6s. Reason: RUNNING
2024-07-27 05:06:13,958 Sleeping for 9s. Reason: RUNNING
2024-07-27 05:06:23,396 Sleeping for 5s. Reason: RUNNING
2024-07-27 05:06:28,814 Sleeping for 10s. Reason: RUNNING
2024-07-27 05:06:42,792 Setting max_seq=508, max_extra_seq=2048
2024-07-27 05:10:30,531 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=39.7 pTM=0.337 ipTM=0.211
2024-07-27 05:11:02,580 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.1 pTM=0.328 ipTM=0.279 tol=9.26
2024-07-27 05:11:34,804 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.9 pTM=0.33 ipTM=0.247 tol=5.75
2024-07-27 05:12:07,161 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40.2 pTM=0.332 ipTM=0.248 tol=4.48
2024-07-27 05:12:39,576 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=40.5 pTM=0.33 ipTM=0.246 tol=5.29
2024-07-27 05:13:12,040 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=40.7 pTM=0.332 ipTM=0.25 tol=4.89
2024-07-27 05:13:44,545 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=40.5 pTM=0.332 ipTM=0.248 tol=2.36
2024-07-27 05:14:17,059 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=40.8 pTM=0.333 ipTM=0.246 tol=3.18
2024-07-27 05:14:49,598 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=40.7 pTM=0.334 ipTM=0.24 tol=4.96
2024-07-27 05:15:22,135 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=40.8 pTM=0.332 ipTM=0.253 tol=5.05
2024-07-27 05:15:54,670 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=40.6 pTM=0.331 ipTM=0.255 tol=3.35
2024-07-27 05:16:27,224 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=40.1 pTM=0.332 ipTM=0.25 tol=2.73
2024-07-27 05:16:59,786 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=40.4 pTM=0.333 ipTM=0.246 tol=1.99
2024-07-27 05:17:32,364 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=40.4 pTM=0.335 ipTM=0.25 tol=2.6
2024-07-27 05:18:04,929 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=40.6 pTM=0.335 ipTM=0.249 tol=1.43
2024-07-27 05:18:37,467 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=40.2 pTM=0.336 ipTM=0.245 tol=3.86
2024-07-27 05:19:10,011 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=40.7 pTM=0.339 ipTM=0.241 tol=4.18
2024-07-27 05:19:42,551 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=40.5 pTM=0.337 ipTM=0.253 tol=2.55
2024-07-27 05:20:15,100 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=40.6 pTM=0.336 ipTM=0.25 tol=2.22
2024-07-27 05:20:47,638 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=40.5 pTM=0.337 ipTM=0.245 tol=2.1
2024-07-27 05:21:20,181 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=40.6 pTM=0.334 ipTM=0.246 tol=4.24
2024-07-27 05:21:52,675 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=40.1 pTM=0.334 ipTM=0.244 tol=4.11
2024-07-27 05:22:25,151 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=40.5 pTM=0.335 ipTM=0.25 tol=3.81
2024-07-27 05:22:57,627 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=40.7 pTM=0.338 ipTM=0.246 tol=4.25
2024-07-27 05:23:30,121 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=40.6 pTM=0.334 ipTM=0.243 tol=4.5
2024-07-27 05:24:02,617 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=40.6 pTM=0.335 ipTM=0.247 tol=4.38
2024-07-27 05:24:35,142 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=40.6 pTM=0.336 ipTM=0.253 tol=3.38
2024-07-27 05:25:07,673 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=40.7 pTM=0.334 ipTM=0.25 tol=3.55
2024-07-27 05:25:40,222 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=40.5 pTM=0.334 ipTM=0.244 tol=3.5
2024-07-27 05:26:12,784 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=40.8 pTM=0.337 ipTM=0.265 tol=4.58
2024-07-27 05:26:45,358 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=40.8 pTM=0.334 ipTM=0.258 tol=4.73
2024-07-27 05:26:45,359 alphafold2_multimer_v3_model_1_seed_000 took 1197.3s (30 recycles)
2024-07-27 05:27:18,746 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=40.8 pTM=0.325 ipTM=0.312
2024-07-27 05:27:51,377 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.8 pTM=0.327 ipTM=0.277 tol=14.8
2024-07-27 05:28:23,981 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.7 pTM=0.348 ipTM=0.258 tol=20
2024-07-27 05:28:56,665 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.7 pTM=0.324 ipTM=0.256 tol=15
2024-07-27 05:29:29,320 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.1 pTM=0.324 ipTM=0.255 tol=12.3
2024-07-27 05:30:01,989 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.3 pTM=0.325 ipTM=0.26 tol=7.42
2024-07-27 05:30:34,636 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43 pTM=0.328 ipTM=0.262 tol=7.29
2024-07-27 05:31:07,284 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.8 pTM=0.331 ipTM=0.255 tol=6.11
2024-07-27 05:31:39,896 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.9 pTM=0.333 ipTM=0.255 tol=3.96
2024-07-27 05:32:12,525 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43 pTM=0.338 ipTM=0.25 tol=3.75
2024-07-27 05:32:45,142 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.8 pTM=0.338 ipTM=0.238 tol=5.65
2024-07-27 05:33:17,768 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.8 pTM=0.336 ipTM=0.238 tol=6.03
2024-07-27 05:33:50,410 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.7 pTM=0.337 ipTM=0.234 tol=3.08
2024-07-27 05:34:23,052 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.4 pTM=0.335 ipTM=0.231 tol=4.19
2024-07-27 05:34:55,684 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42.6 pTM=0.339 ipTM=0.234 tol=3.46
2024-07-27 05:35:28,311 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=42.4 pTM=0.334 ipTM=0.225 tol=2.3
2024-07-27 05:36:00,919 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.6 pTM=0.335 ipTM=0.234 tol=3.4
2024-07-27 05:36:33,551 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.6 pTM=0.336 ipTM=0.232 tol=4.96
2024-07-27 05:37:06,150 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.7 pTM=0.336 ipTM=0.232 tol=3.11
2024-07-27 05:37:38,740 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.4 pTM=0.337 ipTM=0.227 tol=4.37
2024-07-27 05:38:11,359 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=42.8 pTM=0.335 ipTM=0.247 tol=2.54
2024-07-27 05:38:43,980 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.5 pTM=0.335 ipTM=0.235 tol=3.82
2024-07-27 05:39:16,595 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.5 pTM=0.329 ipTM=0.232 tol=4.21
2024-07-27 05:39:49,197 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42.6 pTM=0.335 ipTM=0.227 tol=3.53
2024-07-27 05:40:21,836 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.8 pTM=0.336 ipTM=0.235 tol=4.7
2024-07-27 05:40:54,454 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.1 pTM=0.341 ipTM=0.246 tol=2.75
2024-07-27 05:41:27,067 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42.7 pTM=0.337 ipTM=0.233 tol=2.65
2024-07-27 05:41:59,670 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.8 pTM=0.336 ipTM=0.231 tol=2.35
2024-07-27 05:42:32,240 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.7 pTM=0.338 ipTM=0.239 tol=3.2
2024-07-27 05:43:04,825 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42.7 pTM=0.337 ipTM=0.248 tol=2.26
2024-07-27 05:43:37,415 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42.7 pTM=0.337 ipTM=0.238 tol=3.18
2024-07-27 05:43:37,416 alphafold2_multimer_v3_model_2_seed_000 took 1011.2s (30 recycles)
2024-07-27 05:44:10,962 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42 pTM=0.372 ipTM=0.331
2024-07-27 05:44:43,766 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.2 pTM=0.335 ipTM=0.298 tol=16.8
2024-07-27 05:45:16,600 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.2 pTM=0.336 ipTM=0.329 tol=10.6
2024-07-27 05:45:49,450 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.4 pTM=0.339 ipTM=0.406 tol=6.26
2024-07-27 05:46:22,288 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.6 pTM=0.342 ipTM=0.405 tol=8.05
2024-07-27 05:46:55,120 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.5 pTM=0.337 ipTM=0.406 tol=7.24
2024-07-27 05:47:27,965 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.8 pTM=0.338 ipTM=0.415 tol=6.35
2024-07-27 05:48:00,787 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.2 pTM=0.337 ipTM=0.411 tol=9.59
2024-07-27 05:48:33,619 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=42.8 pTM=0.338 ipTM=0.417 tol=6.74
2024-07-27 05:49:06,440 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.2 pTM=0.34 ipTM=0.415 tol=10.9
2024-07-27 05:49:39,250 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.2 pTM=0.342 ipTM=0.422 tol=11.3
2024-07-27 05:50:12,070 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.8 pTM=0.34 ipTM=0.415 tol=6.69
2024-07-27 05:50:44,900 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.4 pTM=0.34 ipTM=0.422 tol=6.45
2024-07-27 05:51:17,706 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.8 pTM=0.339 ipTM=0.414 tol=8.95
2024-07-27 05:51:50,509 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.9 pTM=0.34 ipTM=0.424 tol=7.32
2024-07-27 05:52:23,348 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.7 pTM=0.34 ipTM=0.421 tol=6.38
2024-07-27 05:52:56,179 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.1 pTM=0.338 ipTM=0.418 tol=6.61
2024-07-27 05:53:29,020 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.8 pTM=0.341 ipTM=0.412 tol=7.14
2024-07-27 05:54:01,847 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.2 pTM=0.34 ipTM=0.411 tol=5.41
2024-07-27 05:54:34,644 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42 pTM=0.337 ipTM=0.415 tol=7.36
2024-07-27 05:55:07,463 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.4 pTM=0.338 ipTM=0.416 tol=6.04
2024-07-27 05:55:40,252 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.6 pTM=0.337 ipTM=0.409 tol=7.92
2024-07-27 05:56:13,092 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.2 pTM=0.337 ipTM=0.411 tol=7.54
2024-07-27 05:56:45,939 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42 pTM=0.335 ipTM=0.414 tol=9.57
2024-07-27 05:57:18,761 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.8 pTM=0.339 ipTM=0.413 tol=7.74
2024-07-27 05:57:51,539 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.3 pTM=0.339 ipTM=0.408 tol=7.5
2024-07-27 05:58:24,332 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.2 pTM=0.337 ipTM=0.407 tol=9.45
2024-07-27 05:58:57,149 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.5 pTM=0.337 ipTM=0.412 tol=7.88
2024-07-27 05:59:29,988 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.9 pTM=0.337 ipTM=0.41 tol=9.72
2024-07-27 06:00:02,834 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.3 pTM=0.34 ipTM=0.413 tol=8.52
2024-07-27 06:00:35,700 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.3 pTM=0.339 ipTM=0.409 tol=5.91
2024-07-27 06:00:35,701 alphafold2_multimer_v3_model_3_seed_000 took 1017.5s (30 recycles)
2024-07-27 06:01:09,257 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.2 pTM=0.316 ipTM=0.187
2024-07-27 06:01:41,952 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.5 pTM=0.342 ipTM=0.293 tol=15.2
2024-07-27 06:02:14,681 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.5 pTM=0.341 ipTM=0.251 tol=7.42
2024-07-27 06:02:47,401 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40.9 pTM=0.344 ipTM=0.422 tol=8.21
2024-07-27 06:03:20,116 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41 pTM=0.346 ipTM=0.427 tol=8.22
2024-07-27 06:03:52,857 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.6 pTM=0.346 ipTM=0.422 tol=7.81
2024-07-27 06:04:25,613 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.6 pTM=0.345 ipTM=0.434 tol=10.9
2024-07-27 06:04:58,392 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.3 pTM=0.344 ipTM=0.436 tol=9.98
2024-07-27 06:05:31,108 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.6 pTM=0.347 ipTM=0.438 tol=10.5
2024-07-27 06:06:03,850 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=40.9 pTM=0.344 ipTM=0.438 tol=8.22
2024-07-27 06:06:36,552 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.6 pTM=0.344 ipTM=0.44 tol=7.68
2024-07-27 06:07:09,317 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=40.7 pTM=0.338 ipTM=0.439 tol=6.69
2024-07-27 06:07:42,061 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=40.2 pTM=0.343 ipTM=0.443 tol=11.8
2024-07-27 06:08:14,819 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41 pTM=0.344 ipTM=0.449 tol=8.27
2024-07-27 06:08:47,575 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.4 pTM=0.343 ipTM=0.448 tol=14.7
2024-07-27 06:09:20,335 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.6 pTM=0.348 ipTM=0.453 tol=12.7
2024-07-27 06:09:53,087 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.2 pTM=0.346 ipTM=0.452 tol=9.74
2024-07-27 06:10:25,847 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.6 pTM=0.347 ipTM=0.45 tol=11.4
2024-07-27 06:10:58,614 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.2 pTM=0.346 ipTM=0.448 tol=9.11
2024-07-27 06:11:31,394 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.9 pTM=0.344 ipTM=0.449 tol=4.81
2024-07-27 06:12:04,122 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.4 pTM=0.344 ipTM=0.447 tol=6.46
2024-07-27 06:12:36,889 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.9 pTM=0.343 ipTM=0.45 tol=6.56
2024-07-27 06:13:09,662 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.3 pTM=0.344 ipTM=0.448 tol=10.7
2024-07-27 06:13:42,447 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41.8 pTM=0.341 ipTM=0.449 tol=12.1
2024-07-27 06:14:15,175 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.3 pTM=0.341 ipTM=0.444 tol=9.87
2024-07-27 06:14:47,979 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.6 pTM=0.341 ipTM=0.447 tol=11.5
2024-07-27 06:15:20,742 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=40.9 pTM=0.34 ipTM=0.446 tol=12.4
2024-07-27 06:15:53,550 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.8 pTM=0.341 ipTM=0.448 tol=9.99
2024-07-27 06:16:26,338 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.2 pTM=0.339 ipTM=0.448 tol=8.05
2024-07-27 06:16:59,144 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.3 pTM=0.341 ipTM=0.45 tol=8.09
2024-07-27 06:17:31,939 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.4 pTM=0.344 ipTM=0.45 tol=14.4
2024-07-27 06:17:31,940 alphafold2_multimer_v3_model_4_seed_000 took 1015.4s (30 recycles)
2024-07-27 06:18:05,589 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.3 pTM=0.314 ipTM=0.22
2024-07-27 06:18:38,456 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.8 pTM=0.328 ipTM=0.263 tol=14.6
2024-07-27 06:19:11,344 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=42.3 pTM=0.33 ipTM=0.259 tol=14.4
2024-07-27 06:19:44,205 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.6 pTM=0.335 ipTM=0.258 tol=6.16
2024-07-27 06:20:17,056 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=43 pTM=0.335 ipTM=0.381 tol=6.27
2024-07-27 06:20:49,926 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.6 pTM=0.335 ipTM=0.404 tol=7.91
2024-07-27 06:21:22,735 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43.4 pTM=0.339 ipTM=0.415 tol=6.84
2024-07-27 06:21:55,539 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.9 pTM=0.338 ipTM=0.418 tol=4.77
2024-07-27 06:22:28,352 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.1 pTM=0.339 ipTM=0.425 tol=5.06
2024-07-27 06:23:01,114 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.9 pTM=0.343 ipTM=0.426 tol=9.5
2024-07-27 06:23:33,862 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.5 pTM=0.346 ipTM=0.428 tol=7.27
2024-07-27 06:24:06,619 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43 pTM=0.34 ipTM=0.426 tol=6.27
2024-07-27 06:24:39,404 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.8 pTM=0.343 ipTM=0.428 tol=7.34
2024-07-27 06:25:12,163 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.9 pTM=0.34 ipTM=0.423 tol=7.5
2024-07-27 06:25:45,048 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.2 pTM=0.338 ipTM=0.426 tol=9.82
2024-07-27 06:26:17,944 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.6 pTM=0.343 ipTM=0.429 tol=12
2024-07-27 06:26:50,794 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43 pTM=0.34 ipTM=0.43 tol=7.34
2024-07-27 06:27:23,666 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43 pTM=0.343 ipTM=0.423 tol=18.5
2024-07-27 06:27:56,550 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.3 pTM=0.34 ipTM=0.427 tol=7.89
2024-07-27 06:28:29,389 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.7 pTM=0.35 ipTM=0.432 tol=21.3
2024-07-27 06:29:02,231 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.2 pTM=0.339 ipTM=0.43 tol=9.5
2024-07-27 06:29:35,101 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.5 pTM=0.341 ipTM=0.429 tol=12.2
2024-07-27 06:30:07,917 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.8 pTM=0.34 ipTM=0.431 tol=8.34
2024-07-27 06:30:40,727 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.2 pTM=0.344 ipTM=0.434 tol=6.62
2024-07-27 06:31:13,567 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.9 pTM=0.342 ipTM=0.432 tol=11
2024-07-27 06:31:46,419 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.8 pTM=0.344 ipTM=0.43 tol=10.8
2024-07-27 06:32:19,217 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.3 pTM=0.347 ipTM=0.433 tol=14.7
2024-07-27 06:32:52,031 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.8 pTM=0.347 ipTM=0.433 tol=8.6
2024-07-27 06:33:24,858 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.5 pTM=0.339 ipTM=0.431 tol=6.99
2024-07-27 06:33:57,729 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.9 pTM=0.344 ipTM=0.434 tol=9.85
2024-07-27 06:34:30,568 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.9 pTM=0.342 ipTM=0.431 tol=11.6
2024-07-27 06:34:30,569 alphafold2_multimer_v3_model_5_seed_000 took 1017.8s (30 recycles)
2024-07-27 06:34:31,393 reranking models by 'multimer' metric
2024-07-27 06:34:34,656 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 06:38:22,195 Relaxation took 230.8s
2024-07-27 06:38:22,195 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.4 pTM=0.344 ipTM=0.45
2024-07-27 06:40:23,630 Relaxation took 121.4s
2024-07-27 06:40:23,630 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.9 pTM=0.342 ipTM=0.431
2024-07-27 06:42:32,525 Relaxation took 128.9s
2024-07-27 06:42:32,525 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.3 pTM=0.339 ipTM=0.409
2024-07-27 06:44:53,759 Relaxation took 141.2s
2024-07-27 06:44:53,759 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=40.8 pTM=0.334 ipTM=0.258
2024-07-27 06:46:53,430 Relaxation took 119.7s
2024-07-27 06:46:53,431 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42.7 pTM=0.337 ipTM=0.238
2024-07-27 06:46:55,663 Done