2024-07-27 05:23:56,576 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 05:23:56,929 Running on GPU 2024-07-27 05:24:00,717 Found 6 citations for tools or databases 2024-07-27 05:24:00,717 Query 1/1: PARS2_FBXO9 (length 922) 2024-07-27 05:24:01,174 Sleeping for 5s. Reason: PENDING 2024-07-27 05:24:06,628 Sleeping for 5s. Reason: RUNNING 2024-07-27 05:24:12,070 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:24:19,481 Sleeping for 8s. Reason: RUNNING 2024-07-27 05:24:27,923 Sleeping for 10s. Reason: RUNNING 2024-07-27 05:24:38,390 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:24:45,832 Sleeping for 9s. Reason: RUNNING 2024-07-27 05:24:55,264 Sleeping for 6s. Reason: RUNNING 2024-07-27 05:25:01,701 Sleeping for 9s. Reason: RUNNING 2024-07-27 05:25:11,125 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:25:18,546 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:25:25,994 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:25:33,402 Sleeping for 6s. Reason: RUNNING 2024-07-27 05:25:39,818 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:25:47,246 Sleeping for 7s. Reason: RUNNING 2024-07-27 05:25:54,683 Sleeping for 8s. Reason: RUNNING 2024-07-27 05:26:03,109 Sleeping for 10s. Reason: RUNNING 2024-07-27 05:26:15,481 Sleeping for 10s. Reason: PENDING 2024-07-27 05:26:25,897 Sleeping for 8s. Reason: RUNNING 2024-07-27 05:26:34,315 Sleeping for 9s. Reason: RUNNING 2024-07-27 05:26:43,770 Sleeping for 6s. Reason: RUNNING 2024-07-27 05:26:50,218 Sleeping for 6s. Reason: RUNNING 2024-07-27 05:26:56,650 Sleeping for 10s. Reason: RUNNING 2024-07-27 05:27:07,070 Sleeping for 5s. Reason: RUNNING 2024-07-27 05:27:12,481 Sleeping for 9s. Reason: RUNNING 2024-07-27 05:27:25,963 Setting max_seq=508, max_extra_seq=2048 2024-07-27 05:31:10,681 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.1 pTM=0.541 ipTM=0.29 2024-07-27 05:31:33,162 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.8 pTM=0.546 ipTM=0.374 tol=8.09 2024-07-27 05:31:55,690 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.6 pTM=0.539 ipTM=0.264 tol=4.43 2024-07-27 05:32:18,254 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.4 pTM=0.539 ipTM=0.283 tol=3.84 2024-07-27 05:32:40,832 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.3 pTM=0.538 ipTM=0.288 tol=2.48 2024-07-27 05:33:03,426 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.4 pTM=0.539 ipTM=0.312 tol=1.54 2024-07-27 05:33:26,046 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.4 pTM=0.539 ipTM=0.302 tol=0.883 2024-07-27 05:33:48,693 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.4 pTM=0.54 ipTM=0.331 tol=0.859 2024-07-27 05:34:11,336 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.3 pTM=0.538 ipTM=0.298 tol=0.758 2024-07-27 05:34:33,989 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.4 pTM=0.539 ipTM=0.324 tol=0.787 2024-07-27 05:34:56,640 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.4 pTM=0.539 ipTM=0.303 tol=1.11 2024-07-27 05:35:19,302 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.1 pTM=0.539 ipTM=0.315 tol=1.09 2024-07-27 05:35:41,956 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.2 pTM=0.538 ipTM=0.303 tol=0.844 2024-07-27 05:36:04,615 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74 pTM=0.539 ipTM=0.325 tol=1.42 2024-07-27 05:36:27,273 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74 pTM=0.537 ipTM=0.321 tol=1.5 2024-07-27 05:36:49,934 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74 pTM=0.537 ipTM=0.32 tol=0.814 2024-07-27 05:37:12,582 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.9 pTM=0.537 ipTM=0.31 tol=1.03 2024-07-27 05:37:35,244 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.2 pTM=0.538 ipTM=0.32 tol=1.04 2024-07-27 05:37:57,900 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74 pTM=0.537 ipTM=0.312 tol=0.711 2024-07-27 05:38:20,556 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.9 pTM=0.537 ipTM=0.304 tol=0.913 2024-07-27 05:38:43,203 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.1 pTM=0.54 ipTM=0.32 tol=0.964 2024-07-27 05:39:05,851 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.9 pTM=0.537 ipTM=0.293 tol=1.02 2024-07-27 05:39:28,513 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.9 pTM=0.538 ipTM=0.315 tol=0.882 2024-07-27 05:39:51,174 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.9 pTM=0.536 ipTM=0.296 tol=1.24 2024-07-27 05:40:13,835 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.9 pTM=0.538 ipTM=0.311 tol=1.04 2024-07-27 05:40:36,500 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.2 pTM=0.537 ipTM=0.299 tol=1.69 2024-07-27 05:40:59,163 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74 pTM=0.538 ipTM=0.315 tol=1.93 2024-07-27 05:41:21,825 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.1 pTM=0.537 ipTM=0.298 tol=1.27 2024-07-27 05:41:44,486 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.9 pTM=0.537 ipTM=0.309 tol=0.928 2024-07-27 05:42:07,147 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.1 pTM=0.537 ipTM=0.301 tol=0.795 2024-07-27 05:42:29,818 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.9 pTM=0.537 ipTM=0.305 tol=0.876 2024-07-27 05:42:29,818 alphafold2_multimer_v3_model_1_seed_000 took 896.9s (30 recycles) 2024-07-27 05:42:53,157 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.3 pTM=0.532 ipTM=0.222 2024-07-27 05:43:15,845 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.3 pTM=0.55 ipTM=0.241 tol=8.02 2024-07-27 05:43:38,549 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.8 pTM=0.562 ipTM=0.462 tol=3.38 2024-07-27 05:44:01,252 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.6 pTM=0.547 ipTM=0.279 tol=2.48 2024-07-27 05:44:23,936 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.5 pTM=0.547 ipTM=0.244 tol=1.12 2024-07-27 05:44:46,607 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.4 pTM=0.555 ipTM=0.325 tol=1.71 2024-07-27 05:45:09,297 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.6 pTM=0.555 ipTM=0.302 tol=1.01 2024-07-27 05:45:31,984 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.5 pTM=0.552 ipTM=0.303 tol=1.3 2024-07-27 05:45:54,673 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.5 pTM=0.555 ipTM=0.328 tol=0.884 2024-07-27 05:46:17,389 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.4 pTM=0.55 ipTM=0.305 tol=0.756 2024-07-27 05:46:40,101 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.6 pTM=0.554 ipTM=0.319 tol=0.732 2024-07-27 05:47:02,805 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.5 pTM=0.551 ipTM=0.302 tol=0.904 2024-07-27 05:47:25,488 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.4 pTM=0.555 ipTM=0.334 tol=1.53 2024-07-27 05:47:48,176 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.3 pTM=0.551 ipTM=0.298 tol=0.632 2024-07-27 05:48:10,850 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.2 pTM=0.553 ipTM=0.338 tol=1 2024-07-27 05:48:33,525 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.3 pTM=0.551 ipTM=0.284 tol=0.698 2024-07-27 05:48:56,204 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.1 pTM=0.549 ipTM=0.278 tol=0.835 2024-07-27 05:49:18,899 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.4 pTM=0.553 ipTM=0.298 tol=0.983 2024-07-27 05:49:41,577 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.3 pTM=0.554 ipTM=0.331 tol=0.525 2024-07-27 05:50:04,278 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.3 pTM=0.551 ipTM=0.294 tol=0.801 2024-07-27 05:50:26,965 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.3 pTM=0.556 ipTM=0.341 tol=1.08 2024-07-27 05:50:49,655 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.2 pTM=0.552 ipTM=0.282 tol=1.42 2024-07-27 05:51:12,337 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.1 pTM=0.552 ipTM=0.267 tol=0.741 2024-07-27 05:51:35,018 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.2 pTM=0.552 ipTM=0.299 tol=1.19 2024-07-27 05:51:57,704 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.3 pTM=0.556 ipTM=0.326 tol=1.04 2024-07-27 05:52:20,381 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.4 pTM=0.554 ipTM=0.305 tol=0.71 2024-07-27 05:52:43,069 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.4 pTM=0.554 ipTM=0.337 tol=0.8 2024-07-27 05:53:05,744 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.4 pTM=0.554 ipTM=0.297 tol=0.667 2024-07-27 05:53:28,410 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.3 pTM=0.555 ipTM=0.326 tol=0.513 2024-07-27 05:53:51,092 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.2 pTM=0.55 ipTM=0.294 tol=1.52 2024-07-27 05:54:13,765 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.1 pTM=0.554 ipTM=0.3 tol=0.924 2024-07-27 05:54:13,765 alphafold2_multimer_v3_model_2_seed_000 took 703.3s (30 recycles) 2024-07-27 05:54:37,200 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.1 pTM=0.512 ipTM=0.154 2024-07-27 05:54:59,952 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.9 pTM=0.529 ipTM=0.22 tol=11.7 2024-07-27 05:55:22,655 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.2 pTM=0.534 ipTM=0.244 tol=5.07 2024-07-27 05:55:45,373 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.2 pTM=0.533 ipTM=0.226 tol=3.11 2024-07-27 05:56:08,082 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.1 pTM=0.534 ipTM=0.223 tol=2.9 2024-07-27 05:56:30,764 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.1 pTM=0.533 ipTM=0.214 tol=3.73 2024-07-27 05:56:53,451 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.2 pTM=0.537 ipTM=0.224 tol=3.05 2024-07-27 05:57:16,138 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.2 pTM=0.535 ipTM=0.228 tol=2.18 2024-07-27 05:57:38,814 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.2 pTM=0.534 ipTM=0.221 tol=2.2 2024-07-27 05:58:01,514 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.2 pTM=0.535 ipTM=0.227 tol=1.84 2024-07-27 05:58:24,214 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.4 pTM=0.536 ipTM=0.221 tol=1.94 2024-07-27 05:58:46,902 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.3 pTM=0.535 ipTM=0.219 tol=2.21 2024-07-27 05:59:09,587 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.2 pTM=0.535 ipTM=0.225 tol=1.7 2024-07-27 05:59:32,308 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.1 pTM=0.533 ipTM=0.224 tol=1.43 2024-07-27 05:59:55,022 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.1 pTM=0.534 ipTM=0.223 tol=0.97 2024-07-27 06:00:17,726 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74 pTM=0.533 ipTM=0.22 tol=1.19 2024-07-27 06:00:40,428 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74 pTM=0.534 ipTM=0.219 tol=0.823 2024-07-27 06:01:03,131 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.1 pTM=0.536 ipTM=0.226 tol=3.06 2024-07-27 06:01:25,826 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.1 pTM=0.535 ipTM=0.225 tol=2.85 2024-07-27 06:01:48,534 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.2 pTM=0.536 ipTM=0.228 tol=1.11 2024-07-27 06:02:11,236 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.1 pTM=0.538 ipTM=0.233 tol=1.25 2024-07-27 06:02:33,945 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.2 pTM=0.538 ipTM=0.23 tol=2.13 2024-07-27 06:02:56,635 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.1 pTM=0.536 ipTM=0.226 tol=1.38 2024-07-27 06:03:19,331 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.1 pTM=0.535 ipTM=0.225 tol=1.58 2024-07-27 06:03:42,021 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.1 pTM=0.537 ipTM=0.226 tol=1.13 2024-07-27 06:04:04,707 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.1 pTM=0.536 ipTM=0.224 tol=1.12 2024-07-27 06:04:27,398 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.1 pTM=0.536 ipTM=0.226 tol=1.54 2024-07-27 06:04:50,089 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.2 pTM=0.535 ipTM=0.224 tol=1.32 2024-07-27 06:05:12,794 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.1 pTM=0.537 ipTM=0.227 tol=1.14 2024-07-27 06:05:35,481 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.2 pTM=0.536 ipTM=0.225 tol=0.789 2024-07-27 06:05:58,185 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.1 pTM=0.536 ipTM=0.23 tol=1.15 2024-07-27 06:05:58,186 alphafold2_multimer_v3_model_3_seed_000 took 703.7s (30 recycles) 2024-07-27 06:06:21,589 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.8 pTM=0.547 ipTM=0.345 2024-07-27 06:06:44,341 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.6 pTM=0.542 ipTM=0.235 tol=12 2024-07-27 06:07:07,167 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.9 pTM=0.552 ipTM=0.384 tol=6.96 2024-07-27 06:07:30,076 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.8 pTM=0.545 ipTM=0.241 tol=8.58 2024-07-27 06:07:53,005 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.9 pTM=0.539 ipTM=0.23 tol=6.54 2024-07-27 06:08:15,887 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.9 pTM=0.538 ipTM=0.224 tol=1.95 2024-07-27 06:08:38,727 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.8 pTM=0.537 ipTM=0.224 tol=3.85 2024-07-27 06:09:01,544 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.7 pTM=0.538 ipTM=0.217 tol=3.21 2024-07-27 06:09:24,375 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.5 pTM=0.535 ipTM=0.209 tol=4.14 2024-07-27 06:09:47,150 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.5 pTM=0.536 ipTM=0.204 tol=3.05 2024-07-27 06:10:09,946 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.5 pTM=0.534 ipTM=0.185 tol=4.76 2024-07-27 06:10:32,722 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.3 pTM=0.534 ipTM=0.203 tol=2.79 2024-07-27 06:10:55,497 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.2 pTM=0.532 ipTM=0.186 tol=4.83 2024-07-27 06:11:18,262 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.1 pTM=0.531 ipTM=0.196 tol=2.2 2024-07-27 06:11:41,045 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73 pTM=0.532 ipTM=0.203 tol=2.64 2024-07-27 06:12:03,819 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.8 pTM=0.53 ipTM=0.179 tol=2.97 2024-07-27 06:12:26,605 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.9 pTM=0.529 ipTM=0.18 tol=3.35 2024-07-27 06:12:49,382 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.1 pTM=0.531 ipTM=0.19 tol=4.71 2024-07-27 06:13:12,154 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.8 pTM=0.529 ipTM=0.186 tol=3.15 2024-07-27 06:13:34,937 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.7 pTM=0.529 ipTM=0.201 tol=3.59 2024-07-27 06:13:57,710 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.8 pTM=0.529 ipTM=0.199 tol=2.81 2024-07-27 06:14:20,467 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.8 pTM=0.53 ipTM=0.206 tol=2.92 2024-07-27 06:14:43,219 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.9 pTM=0.53 ipTM=0.212 tol=3.17 2024-07-27 06:15:05,971 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.9 pTM=0.53 ipTM=0.199 tol=3.09 2024-07-27 06:15:28,745 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73 pTM=0.531 ipTM=0.2 tol=3.29 2024-07-27 06:15:51,528 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.1 pTM=0.532 ipTM=0.195 tol=2.99 2024-07-27 06:16:14,328 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.9 pTM=0.529 ipTM=0.177 tol=3.85 2024-07-27 06:16:37,084 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.2 pTM=0.532 ipTM=0.226 tol=3.36 2024-07-27 06:16:59,826 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.9 pTM=0.531 ipTM=0.19 tol=3.19 2024-07-27 06:17:22,571 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.9 pTM=0.53 ipTM=0.202 tol=2.27 2024-07-27 06:17:45,324 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.9 pTM=0.53 ipTM=0.2 tol=2.83 2024-07-27 06:17:45,325 alphafold2_multimer_v3_model_4_seed_000 took 706.5s (30 recycles) 2024-07-27 06:18:08,698 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.8 pTM=0.551 ipTM=0.276 2024-07-27 06:18:31,423 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.6 pTM=0.546 ipTM=0.225 tol=8.7 2024-07-27 06:18:54,128 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.9 pTM=0.542 ipTM=0.228 tol=6.61 2024-07-27 06:19:16,828 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.1 pTM=0.539 ipTM=0.228 tol=3.39 2024-07-27 06:19:39,530 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.2 pTM=0.538 ipTM=0.23 tol=1.23 2024-07-27 06:20:02,223 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.4 pTM=0.54 ipTM=0.227 tol=1.12 2024-07-27 06:20:24,922 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.4 pTM=0.541 ipTM=0.228 tol=2.79 2024-07-27 06:20:47,615 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.4 pTM=0.54 ipTM=0.225 tol=2.27 2024-07-27 06:21:10,311 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.4 pTM=0.54 ipTM=0.223 tol=1.86 2024-07-27 06:21:32,992 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.5 pTM=0.542 ipTM=0.225 tol=0.95 2024-07-27 06:21:55,696 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.6 pTM=0.544 ipTM=0.227 tol=1.67 2024-07-27 06:22:18,390 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.4 pTM=0.541 ipTM=0.22 tol=0.864 2024-07-27 06:22:41,086 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.4 pTM=0.542 ipTM=0.221 tol=1.31 2024-07-27 06:23:03,781 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.2 pTM=0.541 ipTM=0.225 tol=1.87 2024-07-27 06:23:26,467 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.3 pTM=0.543 ipTM=0.267 tol=0.744 2024-07-27 06:23:49,150 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.4 pTM=0.547 ipTM=0.262 tol=1.96 2024-07-27 06:24:11,828 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.4 pTM=0.545 ipTM=0.277 tol=1.99 2024-07-27 06:24:34,518 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.6 pTM=0.55 ipTM=0.28 tol=1.13 2024-07-27 06:24:57,203 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.4 pTM=0.546 ipTM=0.285 tol=0.765 2024-07-27 06:25:19,890 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.4 pTM=0.546 ipTM=0.278 tol=0.808 2024-07-27 06:25:42,569 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.4 pTM=0.546 ipTM=0.285 tol=0.666 2024-07-27 06:26:05,259 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.6 pTM=0.55 ipTM=0.288 tol=0.92 2024-07-27 06:26:27,956 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.3 pTM=0.548 ipTM=0.294 tol=0.716 2024-07-27 06:26:50,640 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.5 pTM=0.547 ipTM=0.29 tol=0.858 2024-07-27 06:27:13,321 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.4 pTM=0.547 ipTM=0.295 tol=0.556 2024-07-27 06:27:36,008 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.6 pTM=0.549 ipTM=0.294 tol=1.12 2024-07-27 06:27:58,707 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.6 pTM=0.545 ipTM=0.289 tol=1.55 2024-07-27 06:28:21,393 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.6 pTM=0.549 ipTM=0.287 tol=1.83 2024-07-27 06:28:44,080 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.4 pTM=0.547 ipTM=0.291 tol=1.02 2024-07-27 06:29:06,758 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.5 pTM=0.548 ipTM=0.297 tol=0.84 2024-07-27 06:29:29,445 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.4 pTM=0.546 ipTM=0.298 tol=1.06 2024-07-27 06:29:29,446 alphafold2_multimer_v3_model_5_seed_000 took 703.4s (30 recycles) 2024-07-27 06:29:30,114 reranking models by 'multimer' metric 2024-07-27 06:29:31,244 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 06:30:18,936 Relaxation took 48.8s 2024-07-27 06:30:18,937 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.9 pTM=0.537 ipTM=0.305 2024-07-27 06:31:22,703 Relaxation took 63.8s 2024-07-27 06:31:22,704 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.1 pTM=0.554 ipTM=0.3 2024-07-27 06:32:12,885 Relaxation took 50.2s 2024-07-27 06:32:12,886 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.4 pTM=0.546 ipTM=0.298 2024-07-27 06:33:12,819 Relaxation took 59.9s 2024-07-27 06:33:12,819 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.1 pTM=0.536 ipTM=0.23 2024-07-27 06:35:26,974 Relaxation took 134.2s 2024-07-27 06:35:26,974 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.9 pTM=0.53 ipTM=0.2 2024-07-27 06:35:28,908 Done