2024-07-27 06:36:03,645 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 06:36:04,066 Running on GPU 2024-07-27 06:36:07,573 Found 6 citations for tools or databases 2024-07-27 06:36:07,573 Query 1/1: PINX1_FBXO25 (length 695) 2024-07-27 06:36:08,038 Sleeping for 7s. Reason: PENDING 2024-07-27 06:36:15,478 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:36:22,922 Sleeping for 5s. Reason: RUNNING 2024-07-27 06:36:28,345 Sleeping for 8s. Reason: RUNNING 2024-07-27 06:36:36,766 Sleeping for 10s. Reason: RUNNING 2024-07-27 06:36:47,206 Sleeping for 6s. Reason: RUNNING 2024-07-27 06:36:53,640 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:37:01,048 Sleeping for 10s. Reason: RUNNING 2024-07-27 06:37:11,500 Sleeping for 8s. Reason: RUNNING 2024-07-27 06:37:19,929 Sleeping for 8s. Reason: RUNNING 2024-07-27 06:37:29,938 Sleeping for 5s. Reason: PENDING 2024-07-27 06:37:35,367 Sleeping for 10s. Reason: RUNNING 2024-07-27 06:37:45,800 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:37:53,223 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:38:00,655 Sleeping for 8s. Reason: RUNNING 2024-07-27 06:38:11,435 Setting max_seq=508, max_extra_seq=2048 2024-07-27 06:42:10,766 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.9 pTM=0.45 ipTM=0.131 2024-07-27 06:42:23,266 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.6 pTM=0.452 ipTM=0.179 tol=11.2 2024-07-27 06:42:35,754 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.9 pTM=0.451 ipTM=0.218 tol=5.89 2024-07-27 06:42:48,269 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.2 pTM=0.448 ipTM=0.168 tol=4.12 2024-07-27 06:43:00,798 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.2 pTM=0.445 ipTM=0.16 tol=5.83 2024-07-27 06:43:13,321 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.4 pTM=0.453 ipTM=0.167 tol=3.77 2024-07-27 06:43:25,859 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.3 pTM=0.45 ipTM=0.183 tol=4.12 2024-07-27 06:43:38,396 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.5 pTM=0.453 ipTM=0.269 tol=5.66 2024-07-27 06:43:50,973 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.4 pTM=0.455 ipTM=0.273 tol=3.86 2024-07-27 06:44:03,544 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.6 pTM=0.456 ipTM=0.253 tol=2.78 2024-07-27 06:44:16,103 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.8 pTM=0.46 ipTM=0.266 tol=2.6 2024-07-27 06:44:28,676 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.8 pTM=0.458 ipTM=0.226 tol=1.46 2024-07-27 06:44:41,259 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.7 pTM=0.455 ipTM=0.213 tol=2.98 2024-07-27 06:44:53,830 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54 pTM=0.459 ipTM=0.245 tol=2.05 2024-07-27 06:45:06,411 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.7 pTM=0.46 ipTM=0.253 tol=1.79 2024-07-27 06:45:19,006 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.9 pTM=0.463 ipTM=0.278 tol=1.97 2024-07-27 06:45:31,590 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54 pTM=0.462 ipTM=0.295 tol=1.22 2024-07-27 06:45:44,174 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.1 pTM=0.461 ipTM=0.282 tol=1.52 2024-07-27 06:45:56,757 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54 pTM=0.461 ipTM=0.302 tol=2.06 2024-07-27 06:46:09,355 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.2 pTM=0.464 ipTM=0.319 tol=1.24 2024-07-27 06:46:21,950 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.1 pTM=0.467 ipTM=0.326 tol=1.46 2024-07-27 06:46:34,542 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.3 pTM=0.467 ipTM=0.344 tol=1.72 2024-07-27 06:46:47,124 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.2 pTM=0.464 ipTM=0.348 tol=1.85 2024-07-27 06:46:59,706 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.4 pTM=0.466 ipTM=0.354 tol=2.4 2024-07-27 06:47:12,310 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.7 pTM=0.468 ipTM=0.35 tol=2.57 2024-07-27 06:47:24,921 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.5 pTM=0.471 ipTM=0.364 tol=2.49 2024-07-27 06:47:37,515 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.5 pTM=0.468 ipTM=0.339 tol=2.18 2024-07-27 06:47:50,097 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.4 pTM=0.466 ipTM=0.37 tol=1.78 2024-07-27 06:48:02,687 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.5 pTM=0.466 ipTM=0.372 tol=2 2024-07-27 06:48:15,263 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.3 pTM=0.463 ipTM=0.364 tol=1.37 2024-07-27 06:48:27,845 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.5 pTM=0.467 ipTM=0.367 tol=1.36 2024-07-27 06:48:27,846 alphafold2_multimer_v3_model_1_seed_000 took 609.6s (30 recycles) 2024-07-27 06:48:40,860 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.6 pTM=0.453 ipTM=0.314 2024-07-27 06:48:53,436 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.2 pTM=0.464 ipTM=0.336 tol=10.4 2024-07-27 06:49:06,044 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.2 pTM=0.468 ipTM=0.385 tol=9.07 2024-07-27 06:49:18,649 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.469 ipTM=0.405 tol=6.24 2024-07-27 06:49:31,252 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.7 pTM=0.469 ipTM=0.428 tol=2.46 2024-07-27 06:49:43,877 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56 pTM=0.471 ipTM=0.436 tol=1.45 2024-07-27 06:49:56,497 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56 pTM=0.469 ipTM=0.44 tol=1.47 2024-07-27 06:50:09,105 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.9 pTM=0.469 ipTM=0.447 tol=1.25 2024-07-27 06:50:21,710 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.9 pTM=0.469 ipTM=0.444 tol=3.92 2024-07-27 06:50:34,322 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.4 pTM=0.474 ipTM=0.448 tol=1.94 2024-07-27 06:50:46,963 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.3 pTM=0.473 ipTM=0.443 tol=3.5 2024-07-27 06:50:59,570 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.4 pTM=0.476 ipTM=0.441 tol=1.69 2024-07-27 06:51:12,187 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.1 pTM=0.473 ipTM=0.447 tol=1.44 2024-07-27 06:51:24,790 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.6 pTM=0.48 ipTM=0.446 tol=1.87 2024-07-27 06:51:37,382 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.2 pTM=0.478 ipTM=0.444 tol=2.67 2024-07-27 06:51:49,993 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.4 pTM=0.479 ipTM=0.454 tol=1.39 2024-07-27 06:52:02,585 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.8 pTM=0.481 ipTM=0.452 tol=1.17 2024-07-27 06:52:15,171 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.9 pTM=0.482 ipTM=0.451 tol=1.89 2024-07-27 06:52:27,759 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.2 pTM=0.485 ipTM=0.457 tol=5.14 2024-07-27 06:52:40,352 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.8 pTM=0.484 ipTM=0.458 tol=4.35 2024-07-27 06:52:52,944 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.4 pTM=0.49 ipTM=0.457 tol=1.56 2024-07-27 06:53:05,546 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.8 pTM=0.483 ipTM=0.457 tol=1.29 2024-07-27 06:53:18,130 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57 pTM=0.486 ipTM=0.453 tol=1.07 2024-07-27 06:53:30,706 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.9 pTM=0.484 ipTM=0.465 tol=1.64 2024-07-27 06:53:43,289 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57 pTM=0.486 ipTM=0.458 tol=1.56 2024-07-27 06:53:55,876 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57 pTM=0.487 ipTM=0.461 tol=2.09 2024-07-27 06:54:08,465 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.8 pTM=0.484 ipTM=0.462 tol=1.57 2024-07-27 06:54:21,052 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.9 pTM=0.485 ipTM=0.457 tol=1.98 2024-07-27 06:54:33,620 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.8 pTM=0.485 ipTM=0.455 tol=1.72 2024-07-27 06:54:46,194 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.6 pTM=0.483 ipTM=0.453 tol=1.47 2024-07-27 06:54:58,784 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.9 pTM=0.487 ipTM=0.455 tol=1.32 2024-07-27 06:54:58,784 alphafold2_multimer_v3_model_2_seed_000 took 390.5s (30 recycles) 2024-07-27 06:55:11,794 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.3 pTM=0.43 ipTM=0.141 2024-07-27 06:55:24,402 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.1 pTM=0.46 ipTM=0.221 tol=12.3 2024-07-27 06:55:37,016 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.1 pTM=0.461 ipTM=0.244 tol=10.1 2024-07-27 06:55:49,629 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.5 pTM=0.473 ipTM=0.297 tol=4.3 2024-07-27 06:56:02,228 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.6 pTM=0.473 ipTM=0.327 tol=6.23 2024-07-27 06:56:14,818 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.9 pTM=0.478 ipTM=0.333 tol=2.78 2024-07-27 06:56:27,413 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.8 pTM=0.477 ipTM=0.336 tol=1.77 2024-07-27 06:56:40,013 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.8 pTM=0.478 ipTM=0.375 tol=1.72 2024-07-27 06:56:52,615 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56 pTM=0.478 ipTM=0.382 tol=2.3 2024-07-27 06:57:05,212 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.4 pTM=0.484 ipTM=0.392 tol=1.94 2024-07-27 06:57:17,810 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.4 pTM=0.484 ipTM=0.377 tol=2.03 2024-07-27 06:57:30,416 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.2 pTM=0.481 ipTM=0.379 tol=3.32 2024-07-27 06:57:43,020 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56 pTM=0.481 ipTM=0.386 tol=3.36 2024-07-27 06:57:55,625 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.2 pTM=0.482 ipTM=0.385 tol=2.25 2024-07-27 06:58:08,215 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.2 pTM=0.484 ipTM=0.382 tol=2.21 2024-07-27 06:58:20,825 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.1 pTM=0.484 ipTM=0.395 tol=1.92 2024-07-27 06:58:33,432 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.5 pTM=0.484 ipTM=0.379 tol=2.3 2024-07-27 06:58:46,038 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56 pTM=0.479 ipTM=0.382 tol=2.45 2024-07-27 06:58:58,645 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.7 pTM=0.477 ipTM=0.355 tol=2.44 2024-07-27 06:59:11,255 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.8 pTM=0.48 ipTM=0.367 tol=2.81 2024-07-27 06:59:23,862 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.7 pTM=0.478 ipTM=0.363 tol=3.12 2024-07-27 06:59:36,459 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56 pTM=0.479 ipTM=0.362 tol=3.06 2024-07-27 06:59:49,078 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.1 pTM=0.482 ipTM=0.381 tol=3.57 2024-07-27 07:00:01,682 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56 pTM=0.48 ipTM=0.399 tol=3.7 2024-07-27 07:00:14,293 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56 pTM=0.48 ipTM=0.389 tol=7.74 2024-07-27 07:00:26,891 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.4 pTM=0.487 ipTM=0.384 tol=6.53 2024-07-27 07:00:39,495 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.3 pTM=0.483 ipTM=0.365 tol=7.79 2024-07-27 07:00:52,118 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56 pTM=0.482 ipTM=0.375 tol=7.1 2024-07-27 07:01:04,724 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.8 pTM=0.483 ipTM=0.372 tol=4.48 2024-07-27 07:01:17,326 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.4 pTM=0.479 ipTM=0.362 tol=3.83 2024-07-27 07:01:29,938 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.7 pTM=0.48 ipTM=0.364 tol=3.5 2024-07-27 07:01:29,938 alphafold2_multimer_v3_model_3_seed_000 took 390.8s (30 recycles) 2024-07-27 07:01:42,972 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.2 pTM=0.43 ipTM=0.19 2024-07-27 07:01:55,603 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.4 pTM=0.438 ipTM=0.178 tol=11.9 2024-07-27 07:02:08,237 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.5 pTM=0.435 ipTM=0.145 tol=5.24 2024-07-27 07:02:20,868 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.5 pTM=0.434 ipTM=0.13 tol=2.82 2024-07-27 07:02:33,497 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.4 pTM=0.438 ipTM=0.141 tol=3.92 2024-07-27 07:02:46,123 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.3 pTM=0.436 ipTM=0.14 tol=3.48 2024-07-27 07:02:58,728 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.9 pTM=0.439 ipTM=0.13 tol=2.39 2024-07-27 07:03:11,351 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.7 pTM=0.439 ipTM=0.127 tol=8 2024-07-27 07:03:23,970 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.8 pTM=0.441 ipTM=0.134 tol=4.72 2024-07-27 07:03:36,577 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.8 pTM=0.442 ipTM=0.142 tol=6.39 2024-07-27 07:03:49,185 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.8 pTM=0.438 ipTM=0.134 tol=5.76 2024-07-27 07:04:01,787 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.6 pTM=0.439 ipTM=0.138 tol=2.97 2024-07-27 07:04:14,389 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.3 pTM=0.44 ipTM=0.138 tol=1.55 2024-07-27 07:04:26,991 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.6 pTM=0.443 ipTM=0.152 tol=4.91 2024-07-27 07:04:39,589 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.7 pTM=0.443 ipTM=0.155 tol=2.97 2024-07-27 07:04:52,190 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.3 pTM=0.442 ipTM=0.152 tol=3.47 2024-07-27 07:05:04,783 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.5 pTM=0.442 ipTM=0.149 tol=2.7 2024-07-27 07:05:17,383 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.5 pTM=0.441 ipTM=0.146 tol=4.8 2024-07-27 07:05:29,992 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.8 pTM=0.442 ipTM=0.149 tol=3.95 2024-07-27 07:05:42,599 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.6 pTM=0.442 ipTM=0.153 tol=2.76 2024-07-27 07:05:55,197 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.8 pTM=0.443 ipTM=0.15 tol=3.69 2024-07-27 07:06:07,810 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.6 pTM=0.446 ipTM=0.153 tol=3.38 2024-07-27 07:06:20,419 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.4 pTM=0.448 ipTM=0.149 tol=1.89 2024-07-27 07:06:33,027 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.5 pTM=0.446 ipTM=0.151 tol=1.67 2024-07-27 07:06:45,639 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.3 pTM=0.447 ipTM=0.143 tol=3.85 2024-07-27 07:06:58,250 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.3 pTM=0.448 ipTM=0.144 tol=2.36 2024-07-27 07:07:10,867 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.1 pTM=0.445 ipTM=0.134 tol=1.64 2024-07-27 07:07:23,476 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.2 pTM=0.446 ipTM=0.137 tol=3.43 2024-07-27 07:07:36,088 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52 pTM=0.443 ipTM=0.141 tol=3.65 2024-07-27 07:07:48,697 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52 pTM=0.442 ipTM=0.139 tol=1.82 2024-07-27 07:08:01,307 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.2 pTM=0.447 ipTM=0.14 tol=1.59 2024-07-27 07:08:01,308 alphafold2_multimer_v3_model_4_seed_000 took 391.0s (30 recycles) 2024-07-27 07:08:14,339 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51 pTM=0.431 ipTM=0.14 2024-07-27 07:08:26,952 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.4 pTM=0.451 ipTM=0.206 tol=10.6 2024-07-27 07:08:39,590 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.5 pTM=0.45 ipTM=0.228 tol=8 2024-07-27 07:08:52,228 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.6 pTM=0.456 ipTM=0.256 tol=6.38 2024-07-27 07:09:04,853 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.6 pTM=0.452 ipTM=0.25 tol=5.93 2024-07-27 07:09:17,475 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.9 pTM=0.455 ipTM=0.241 tol=5.09 2024-07-27 07:09:30,092 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.5 pTM=0.452 ipTM=0.247 tol=7.05 2024-07-27 07:09:42,709 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.4 pTM=0.45 ipTM=0.243 tol=5.14 2024-07-27 07:09:55,332 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.1 pTM=0.447 ipTM=0.229 tol=4.5 2024-07-27 07:10:07,948 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.5 pTM=0.452 ipTM=0.232 tol=4.23 2024-07-27 07:10:20,580 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53 pTM=0.448 ipTM=0.229 tol=5.98 2024-07-27 07:10:33,209 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53 pTM=0.447 ipTM=0.222 tol=4.23 2024-07-27 07:10:45,842 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.3 pTM=0.443 ipTM=0.209 tol=4.32 2024-07-27 07:10:58,464 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.3 pTM=0.443 ipTM=0.204 tol=4.23 2024-07-27 07:11:11,086 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.1 pTM=0.443 ipTM=0.202 tol=4.79 2024-07-27 07:11:23,704 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.9 pTM=0.442 ipTM=0.183 tol=2.79 2024-07-27 07:11:36,340 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.4 pTM=0.444 ipTM=0.192 tol=4.82 2024-07-27 07:11:48,955 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.3 pTM=0.441 ipTM=0.191 tol=2.06 2024-07-27 07:12:01,582 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.6 pTM=0.443 ipTM=0.2 tol=4.02 2024-07-27 07:12:14,208 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.4 pTM=0.442 ipTM=0.191 tol=4.29 2024-07-27 07:12:26,838 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.1 pTM=0.445 ipTM=0.203 tol=3.87 2024-07-27 07:12:39,460 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.8 pTM=0.442 ipTM=0.196 tol=5.91 2024-07-27 07:12:52,092 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.8 pTM=0.444 ipTM=0.202 tol=4.53 2024-07-27 07:13:04,728 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.7 pTM=0.444 ipTM=0.204 tol=3.55 2024-07-27 07:13:17,373 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.8 pTM=0.442 ipTM=0.184 tol=3.45 2024-07-27 07:13:30,000 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.7 pTM=0.442 ipTM=0.191 tol=3.69 2024-07-27 07:13:42,623 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.9 pTM=0.441 ipTM=0.181 tol=3.12 2024-07-27 07:13:55,242 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.4 pTM=0.445 ipTM=0.187 tol=4.54 2024-07-27 07:14:07,867 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.7 pTM=0.44 ipTM=0.179 tol=7.19 2024-07-27 07:14:20,502 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.9 pTM=0.437 ipTM=0.167 tol=3.01 2024-07-27 07:14:33,134 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.1 pTM=0.439 ipTM=0.178 tol=5.05 2024-07-27 07:14:33,134 alphafold2_multimer_v3_model_5_seed_000 took 391.4s (30 recycles) 2024-07-27 07:14:33,528 reranking models by 'multimer' metric 2024-07-27 07:14:36,798 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 07:15:38,976 Relaxation took 65.4s 2024-07-27 07:15:38,976 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.9 pTM=0.487 ipTM=0.455 2024-07-27 07:16:39,418 Relaxation took 60.4s 2024-07-27 07:16:39,418 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.5 pTM=0.467 ipTM=0.367 2024-07-27 07:17:37,677 Relaxation took 58.3s 2024-07-27 07:17:37,677 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.7 pTM=0.48 ipTM=0.364 2024-07-27 07:18:49,441 Relaxation took 71.8s 2024-07-27 07:18:49,441 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.1 pTM=0.439 ipTM=0.178 2024-07-27 07:19:43,305 Relaxation took 53.9s 2024-07-27 07:19:43,305 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.2 pTM=0.447 ipTM=0.14 2024-07-27 07:19:44,796 Done