2024-07-27 06:41:03,272 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 06:41:03,639 Running on GPU 2024-07-27 06:41:07,298 Found 6 citations for tools or databases 2024-07-27 06:41:07,298 Query 1/1: PINX1_FBXO42 (length 1045) 2024-07-27 06:41:07,782 Sleeping for 5s. Reason: PENDING 2024-07-27 06:41:13,205 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:41:20,620 Sleeping for 6s. Reason: RUNNING 2024-07-27 06:41:27,046 Sleeping for 9s. Reason: RUNNING 2024-07-27 06:41:36,470 Sleeping for 5s. Reason: RUNNING 2024-07-27 06:41:41,933 Sleeping for 9s. Reason: RUNNING 2024-07-27 06:41:51,342 Sleeping for 9s. Reason: RUNNING 2024-07-27 06:42:00,759 Sleeping for 6s. Reason: RUNNING 2024-07-27 06:42:07,169 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:42:14,604 Sleeping for 6s. Reason: RUNNING 2024-07-27 06:42:21,046 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:42:28,461 Sleeping for 7s. Reason: RUNNING 2024-07-27 06:42:35,886 Sleeping for 8s. Reason: RUNNING 2024-07-27 06:42:44,299 Sleeping for 5s. Reason: RUNNING 2024-07-27 06:42:51,359 Sleeping for 10s. Reason: PENDING 2024-07-27 06:43:01,775 Sleeping for 9s. Reason: RUNNING 2024-07-27 06:43:11,206 Sleeping for 6s. Reason: RUNNING 2024-07-27 06:43:17,626 Sleeping for 8s. Reason: RUNNING 2024-07-27 06:43:26,050 Sleeping for 5s. Reason: RUNNING 2024-07-27 06:43:31,461 Sleeping for 6s. Reason: RUNNING 2024-07-27 06:43:40,961 Setting max_seq=508, max_extra_seq=2048 2024-07-27 06:48:08,373 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.4 pTM=0.455 ipTM=0.159 2024-07-27 06:48:37,265 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47 pTM=0.459 ipTM=0.176 tol=14.4 2024-07-27 06:49:06,262 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47 pTM=0.462 ipTM=0.19 tol=13.6 2024-07-27 06:49:35,362 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.9 pTM=0.467 ipTM=0.192 tol=6.64 2024-07-27 06:50:04,501 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.1 pTM=0.471 ipTM=0.208 tol=4.77 2024-07-27 06:50:33,701 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48 pTM=0.467 ipTM=0.194 tol=5.4 2024-07-27 06:51:02,921 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.2 pTM=0.469 ipTM=0.207 tol=6.55 2024-07-27 06:51:32,187 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.2 pTM=0.464 ipTM=0.19 tol=3.36 2024-07-27 06:52:01,483 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.3 pTM=0.467 ipTM=0.202 tol=5.1 2024-07-27 06:52:30,750 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.3 pTM=0.465 ipTM=0.204 tol=3.85 2024-07-27 06:53:00,023 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.4 pTM=0.468 ipTM=0.216 tol=3.18 2024-07-27 06:53:29,294 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.1 pTM=0.463 ipTM=0.195 tol=2.95 2024-07-27 06:53:58,534 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.3 pTM=0.467 ipTM=0.218 tol=3.14 2024-07-27 06:54:27,748 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.2 pTM=0.464 ipTM=0.247 tol=4.44 2024-07-27 06:54:56,941 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.2 pTM=0.466 ipTM=0.227 tol=2.72 2024-07-27 06:55:26,115 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.9 pTM=0.463 ipTM=0.213 tol=2.71 2024-07-27 06:55:55,286 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48 pTM=0.465 ipTM=0.211 tol=3.77 2024-07-27 06:56:24,444 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.8 pTM=0.461 ipTM=0.188 tol=6.93 2024-07-27 06:56:53,612 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.1 pTM=0.465 ipTM=0.198 tol=7.41 2024-07-27 06:57:22,777 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48 pTM=0.462 ipTM=0.189 tol=5.03 2024-07-27 06:57:51,914 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.9 pTM=0.465 ipTM=0.2 tol=4.69 2024-07-27 06:58:21,096 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.1 pTM=0.464 ipTM=0.196 tol=4.41 2024-07-27 06:58:50,255 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.2 pTM=0.466 ipTM=0.217 tol=2.72 2024-07-27 06:59:19,422 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48 pTM=0.461 ipTM=0.183 tol=5.41 2024-07-27 06:59:48,588 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.9 pTM=0.466 ipTM=0.198 tol=5.57 2024-07-27 07:00:17,741 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48 pTM=0.464 ipTM=0.195 tol=2.47 2024-07-27 07:00:46,948 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.1 pTM=0.466 ipTM=0.205 tol=2.31 2024-07-27 07:01:16,129 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48.2 pTM=0.463 ipTM=0.191 tol=2.45 2024-07-27 07:01:45,308 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.5 pTM=0.468 ipTM=0.217 tol=5.5 2024-07-27 07:02:14,493 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.1 pTM=0.464 ipTM=0.203 tol=5.42 2024-07-27 07:02:43,684 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.2 pTM=0.467 ipTM=0.221 tol=4.77 2024-07-27 07:02:43,685 alphafold2_multimer_v3_model_1_seed_000 took 1135.8s (30 recycles) 2024-07-27 07:03:13,731 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.4 pTM=0.457 ipTM=0.141 2024-07-27 07:03:42,961 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.1 pTM=0.461 ipTM=0.169 tol=15.6 2024-07-27 07:04:12,184 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.3 pTM=0.478 ipTM=0.284 tol=9.92 2024-07-27 07:04:41,408 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.9 pTM=0.482 ipTM=0.422 tol=5.72 2024-07-27 07:05:10,624 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.8 pTM=0.48 ipTM=0.403 tol=5.05 2024-07-27 07:05:39,858 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.9 pTM=0.481 ipTM=0.439 tol=2.56 2024-07-27 07:06:09,098 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=51.1 pTM=0.481 ipTM=0.424 tol=2.95 2024-07-27 07:06:38,330 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51 pTM=0.481 ipTM=0.426 tol=1.48 2024-07-27 07:07:07,575 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.2 pTM=0.482 ipTM=0.447 tol=1.92 2024-07-27 07:07:36,806 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.3 pTM=0.484 ipTM=0.453 tol=2.07 2024-07-27 07:08:06,066 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.3 pTM=0.484 ipTM=0.454 tol=1.77 2024-07-27 07:08:35,300 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.3 pTM=0.484 ipTM=0.45 tol=1.92 2024-07-27 07:09:04,527 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.4 pTM=0.485 ipTM=0.46 tol=1.76 2024-07-27 07:09:33,764 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.4 pTM=0.485 ipTM=0.462 tol=1.63 2024-07-27 07:10:02,980 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=51.5 pTM=0.485 ipTM=0.463 tol=1.86 2024-07-27 07:10:32,201 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.4 pTM=0.486 ipTM=0.469 tol=2.41 2024-07-27 07:11:01,414 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.5 pTM=0.485 ipTM=0.469 tol=1.74 2024-07-27 07:11:30,630 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.6 pTM=0.486 ipTM=0.476 tol=1.51 2024-07-27 07:11:59,884 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=51.7 pTM=0.487 ipTM=0.479 tol=1.59 2024-07-27 07:12:29,116 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.6 pTM=0.486 ipTM=0.476 tol=1.53 2024-07-27 07:12:58,347 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.6 pTM=0.486 ipTM=0.479 tol=1.42 2024-07-27 07:13:27,570 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.7 pTM=0.487 ipTM=0.478 tol=1.46 2024-07-27 07:13:56,787 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=51.7 pTM=0.486 ipTM=0.477 tol=1.55 2024-07-27 07:14:26,011 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.6 pTM=0.486 ipTM=0.478 tol=1.4 2024-07-27 07:14:55,230 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=51.6 pTM=0.488 ipTM=0.481 tol=1.67 2024-07-27 07:15:24,478 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.6 pTM=0.487 ipTM=0.478 tol=1.45 2024-07-27 07:15:53,723 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.5 pTM=0.486 ipTM=0.479 tol=1.25 2024-07-27 07:16:22,970 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.7 pTM=0.487 ipTM=0.478 tol=1.72 2024-07-27 07:16:52,176 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=51.7 pTM=0.486 ipTM=0.476 tol=1.45 2024-07-27 07:17:21,428 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=51.6 pTM=0.486 ipTM=0.48 tol=1.64 2024-07-27 07:17:50,636 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.5 pTM=0.486 ipTM=0.477 tol=1.49 2024-07-27 07:17:50,637 alphafold2_multimer_v3_model_2_seed_000 took 906.1s (30 recycles) 2024-07-27 07:18:20,809 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47 pTM=0.462 ipTM=0.163 2024-07-27 07:18:50,138 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48 pTM=0.471 ipTM=0.259 tol=15.5 2024-07-27 07:19:19,446 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.6 pTM=0.475 ipTM=0.308 tol=12 2024-07-27 07:19:48,752 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.9 pTM=0.475 ipTM=0.368 tol=6.9 2024-07-27 07:20:18,042 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.6 pTM=0.476 ipTM=0.414 tol=5.7 2024-07-27 07:20:47,337 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.7 pTM=0.476 ipTM=0.448 tol=5.5 2024-07-27 07:21:16,634 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.6 pTM=0.475 ipTM=0.429 tol=2.93 2024-07-27 07:21:45,917 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.5 pTM=0.472 ipTM=0.428 tol=3.77 2024-07-27 07:22:15,222 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.8 pTM=0.473 ipTM=0.462 tol=3.96 2024-07-27 07:22:44,510 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.9 pTM=0.473 ipTM=0.457 tol=3.04 2024-07-27 07:23:13,825 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.6 pTM=0.471 ipTM=0.465 tol=2.64 2024-07-27 07:23:43,145 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.4 pTM=0.471 ipTM=0.452 tol=3.03 2024-07-27 07:24:12,495 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.3 pTM=0.472 ipTM=0.456 tol=7.32 2024-07-27 07:24:41,824 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.3 pTM=0.474 ipTM=0.451 tol=9.91 2024-07-27 07:25:11,152 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.3 pTM=0.474 ipTM=0.444 tol=6.12 2024-07-27 07:25:40,464 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.2 pTM=0.474 ipTM=0.44 tol=5.35 2024-07-27 07:26:09,798 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.5 pTM=0.475 ipTM=0.457 tol=2.39 2024-07-27 07:26:39,144 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.5 pTM=0.474 ipTM=0.461 tol=2.69 2024-07-27 07:27:08,485 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.4 pTM=0.476 ipTM=0.461 tol=2.71 2024-07-27 07:27:37,847 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.3 pTM=0.475 ipTM=0.455 tol=2.67 2024-07-27 07:28:07,191 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.2 pTM=0.475 ipTM=0.462 tol=3.23 2024-07-27 07:28:36,512 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.3 pTM=0.475 ipTM=0.455 tol=2.76 2024-07-27 07:29:05,838 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.2 pTM=0.474 ipTM=0.462 tol=2.07 2024-07-27 07:29:35,191 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.2 pTM=0.475 ipTM=0.455 tol=2.41 2024-07-27 07:30:04,514 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.3 pTM=0.475 ipTM=0.458 tol=2.44 2024-07-27 07:30:33,879 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.2 pTM=0.477 ipTM=0.458 tol=2.01 2024-07-27 07:31:03,202 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.3 pTM=0.477 ipTM=0.463 tol=1.59 2024-07-27 07:31:32,507 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.6 pTM=0.477 ipTM=0.459 tol=2.1 2024-07-27 07:32:01,838 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.5 pTM=0.476 ipTM=0.456 tol=2.49 2024-07-27 07:32:31,150 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.4 pTM=0.477 ipTM=0.461 tol=2.46 2024-07-27 07:33:00,476 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.3 pTM=0.475 ipTM=0.449 tol=1.94 2024-07-27 07:33:00,477 alphafold2_multimer_v3_model_3_seed_000 took 909.0s (30 recycles) 2024-07-27 07:33:30,713 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.2 pTM=0.46 ipTM=0.179 2024-07-27 07:34:00,047 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.7 pTM=0.469 ipTM=0.209 tol=15.2 2024-07-27 07:34:29,378 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.9 pTM=0.471 ipTM=0.203 tol=7.59 2024-07-27 07:34:58,729 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.3 pTM=0.472 ipTM=0.223 tol=7.29 2024-07-27 07:35:28,099 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.5 pTM=0.472 ipTM=0.3 tol=8.62 2024-07-27 07:35:57,471 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.5 pTM=0.47 ipTM=0.211 tol=4.68 2024-07-27 07:36:26,859 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.6 pTM=0.472 ipTM=0.215 tol=4.82 2024-07-27 07:36:56,242 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.8 pTM=0.473 ipTM=0.273 tol=5.96 2024-07-27 07:37:25,625 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.1 pTM=0.472 ipTM=0.28 tol=6.3 2024-07-27 07:37:54,980 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49 pTM=0.473 ipTM=0.211 tol=4.66 2024-07-27 07:38:24,336 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.1 pTM=0.474 ipTM=0.269 tol=3.35 2024-07-27 07:38:53,686 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.2 pTM=0.473 ipTM=0.267 tol=5.63 2024-07-27 07:39:23,012 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.1 pTM=0.473 ipTM=0.216 tol=5.87 2024-07-27 07:39:52,347 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.9 pTM=0.473 ipTM=0.22 tol=4.74 2024-07-27 07:40:21,680 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.2 pTM=0.474 ipTM=0.263 tol=2.5 2024-07-27 07:40:51,011 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.1 pTM=0.473 ipTM=0.283 tol=2.49 2024-07-27 07:41:20,354 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49 pTM=0.471 ipTM=0.213 tol=2.65 2024-07-27 07:41:49,686 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.2 pTM=0.473 ipTM=0.245 tol=2.75 2024-07-27 07:42:19,045 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.2 pTM=0.472 ipTM=0.235 tol=2.11 2024-07-27 07:42:48,381 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.9 pTM=0.472 ipTM=0.213 tol=2.64 2024-07-27 07:43:17,724 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.2 pTM=0.475 ipTM=0.301 tol=2.82 2024-07-27 07:43:47,069 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.1 pTM=0.472 ipTM=0.248 tol=2.17 2024-07-27 07:44:16,422 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.9 pTM=0.474 ipTM=0.213 tol=2.97 2024-07-27 07:44:45,784 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49 pTM=0.474 ipTM=0.28 tol=3.11 2024-07-27 07:45:15,095 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.8 pTM=0.472 ipTM=0.212 tol=3.01 2024-07-27 07:45:44,428 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49 pTM=0.476 ipTM=0.296 tol=2.82 2024-07-27 07:46:13,763 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.3 pTM=0.475 ipTM=0.346 tol=3.67 2024-07-27 07:46:43,095 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.1 pTM=0.473 ipTM=0.217 tol=3.45 2024-07-27 07:47:12,417 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49 pTM=0.473 ipTM=0.244 tol=1.79 2024-07-27 07:47:41,750 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.2 pTM=0.475 ipTM=0.284 tol=2.08 2024-07-27 07:48:11,075 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.1 pTM=0.472 ipTM=0.272 tol=1.76 2024-07-27 07:48:11,076 alphafold2_multimer_v3_model_4_seed_000 took 909.7s (30 recycles) 2024-07-27 07:48:41,302 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.3 pTM=0.45 ipTM=0.143 2024-07-27 07:49:10,670 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.1 pTM=0.45 ipTM=0.135 tol=16.7 2024-07-27 07:49:40,030 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.5 pTM=0.456 ipTM=0.136 tol=12.7 2024-07-27 07:50:09,410 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.5 pTM=0.456 ipTM=0.139 tol=6.95 2024-07-27 07:50:38,774 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.7 pTM=0.457 ipTM=0.139 tol=7.84 2024-07-27 07:51:08,135 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.9 pTM=0.457 ipTM=0.139 tol=5.39 2024-07-27 07:51:37,482 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.1 pTM=0.458 ipTM=0.139 tol=4.42 2024-07-27 07:52:06,822 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48 pTM=0.458 ipTM=0.144 tol=4.09 2024-07-27 07:52:36,163 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48.2 pTM=0.458 ipTM=0.145 tol=4.95 2024-07-27 07:53:05,494 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.2 pTM=0.46 ipTM=0.152 tol=3.79 2024-07-27 07:53:34,835 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.3 pTM=0.459 ipTM=0.155 tol=5.48 2024-07-27 07:54:04,189 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=48.5 pTM=0.459 ipTM=0.154 tol=6.73 2024-07-27 07:54:33,527 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=48.5 pTM=0.459 ipTM=0.151 tol=7.02 2024-07-27 07:55:02,874 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=48.7 pTM=0.458 ipTM=0.145 tol=5.61 2024-07-27 07:55:32,231 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48.6 pTM=0.457 ipTM=0.15 tol=4.07 2024-07-27 07:56:01,576 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.5 pTM=0.457 ipTM=0.155 tol=4.87 2024-07-27 07:56:30,915 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.6 pTM=0.457 ipTM=0.157 tol=2.62 2024-07-27 07:57:00,251 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48.6 pTM=0.456 ipTM=0.149 tol=5.02 2024-07-27 07:57:29,598 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48.6 pTM=0.457 ipTM=0.149 tol=3.47 2024-07-27 07:57:58,943 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48.5 pTM=0.456 ipTM=0.148 tol=4.15 2024-07-27 07:58:28,278 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.3 pTM=0.456 ipTM=0.148 tol=3.36 2024-07-27 07:58:57,623 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.5 pTM=0.456 ipTM=0.149 tol=2.53 2024-07-27 07:59:26,973 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.5 pTM=0.456 ipTM=0.144 tol=3.54 2024-07-27 07:59:56,316 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.4 pTM=0.457 ipTM=0.132 tol=4 2024-07-27 08:00:25,679 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.4 pTM=0.457 ipTM=0.132 tol=3.8 2024-07-27 08:00:55,018 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.4 pTM=0.457 ipTM=0.132 tol=4.38 2024-07-27 08:01:24,362 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=48.6 pTM=0.457 ipTM=0.13 tol=3.75 2024-07-27 08:01:53,698 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.6 pTM=0.457 ipTM=0.132 tol=4.86 2024-07-27 08:02:23,030 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.7 pTM=0.457 ipTM=0.13 tol=4.33 2024-07-27 08:02:52,365 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.5 pTM=0.456 ipTM=0.131 tol=4.06 2024-07-27 08:03:21,685 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.5 pTM=0.456 ipTM=0.131 tol=3.58 2024-07-27 08:03:21,686 alphafold2_multimer_v3_model_5_seed_000 took 909.8s (30 recycles) 2024-07-27 08:03:22,532 reranking models by 'multimer' metric 2024-07-27 08:03:25,836 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 08:05:04,886 Relaxation took 102.4s 2024-07-27 08:05:04,886 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.5 pTM=0.486 ipTM=0.477 2024-07-27 08:07:13,508 Relaxation took 128.6s 2024-07-27 08:07:13,509 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.3 pTM=0.475 ipTM=0.449 2024-07-27 08:09:30,686 Relaxation took 137.2s 2024-07-27 08:09:30,686 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.1 pTM=0.472 ipTM=0.272 2024-07-27 08:27:42,466 Relaxation took 1091.8s 2024-07-27 08:27:42,467 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.2 pTM=0.467 ipTM=0.221 2024-07-27 08:29:52,910 Relaxation took 130.4s 2024-07-27 08:29:52,910 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.5 pTM=0.456 ipTM=0.131 2024-07-27 08:29:55,241 Done