2024-07-27 06:43:15,396 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 06:43:15,740 Running on GPU
2024-07-27 06:43:19,097 Found 6 citations for tools or databases
2024-07-27 06:43:19,097 Query 1/1: PJA1_COPS7B (length 908)
2024-07-27 06:43:19,772 Sleeping for 10s. Reason: PENDING
2024-07-27 06:43:30,221 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:43:40,667 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:43:49,091 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:43:55,509 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:44:04,942 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:44:14,382 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:44:22,824 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:44:28,261 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:44:34,683 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:44:43,108 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:44:55,217 Sleeping for 10s. Reason: PENDING
2024-07-27 06:45:05,636 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:45:15,061 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:45:24,495 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:45:37,316 Setting max_seq=508, max_extra_seq=2048
2024-07-27 06:48:01,439 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.6 pTM=0.321 ipTM=0.2
2024-07-27 06:48:18,535 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=41.2 pTM=0.328 ipTM=0.213 tol=12.4
2024-07-27 06:48:35,681 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=41.5 pTM=0.328 ipTM=0.204 tol=9.3
2024-07-27 06:48:52,862 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=41.7 pTM=0.327 ipTM=0.213 tol=6.36
2024-07-27 06:49:10,074 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.9 pTM=0.331 ipTM=0.225 tol=6.11
2024-07-27 06:49:27,292 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.8 pTM=0.325 ipTM=0.232 tol=4.93
2024-07-27 06:49:44,534 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.8 pTM=0.329 ipTM=0.233 tol=5.55
2024-07-27 06:50:01,796 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.8 pTM=0.328 ipTM=0.227 tol=3.53
2024-07-27 06:50:19,062 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.8 pTM=0.33 ipTM=0.221 tol=3.13
2024-07-27 06:50:36,337 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.9 pTM=0.323 ipTM=0.213 tol=3.68
2024-07-27 06:50:53,619 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42 pTM=0.331 ipTM=0.22 tol=3.86
2024-07-27 06:51:10,912 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.8 pTM=0.326 ipTM=0.224 tol=3.13
2024-07-27 06:51:28,203 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.8 pTM=0.33 ipTM=0.227 tol=2.04
2024-07-27 06:51:45,478 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.8 pTM=0.324 ipTM=0.231 tol=8.18
2024-07-27 06:52:02,762 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41.9 pTM=0.329 ipTM=0.225 tol=8.26
2024-07-27 06:52:20,037 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.6 pTM=0.325 ipTM=0.23 tol=2.65
2024-07-27 06:52:37,347 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.7 pTM=0.33 ipTM=0.227 tol=2.44
2024-07-27 06:52:54,645 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.6 pTM=0.324 ipTM=0.231 tol=2.37
2024-07-27 06:53:11,940 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.7 pTM=0.328 ipTM=0.227 tol=2.19
2024-07-27 06:53:29,234 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.8 pTM=0.325 ipTM=0.227 tol=2.16
2024-07-27 06:53:46,538 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.6 pTM=0.329 ipTM=0.231 tol=2.45
2024-07-27 06:54:03,835 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.6 pTM=0.323 ipTM=0.234 tol=3.28
2024-07-27 06:54:21,135 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.6 pTM=0.329 ipTM=0.229 tol=2.14
2024-07-27 06:54:38,450 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.3 pTM=0.322 ipTM=0.229 tol=2.83
2024-07-27 06:54:55,748 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.6 pTM=0.328 ipTM=0.228 tol=3.02
2024-07-27 06:55:13,046 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.6 pTM=0.322 ipTM=0.221 tol=2.75
2024-07-27 06:55:30,349 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.8 pTM=0.329 ipTM=0.227 tol=4.93
2024-07-27 06:55:47,659 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.7 pTM=0.323 ipTM=0.227 tol=3.2
2024-07-27 06:56:04,954 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.9 pTM=0.328 ipTM=0.228 tol=4.29
2024-07-27 06:56:22,251 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.7 pTM=0.325 ipTM=0.232 tol=3.37
2024-07-27 06:56:39,558 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.8 pTM=0.329 ipTM=0.236 tol=3.61
2024-07-27 06:56:39,559 alphafold2_multimer_v3_model_1_seed_000 took 656.8s (30 recycles)
2024-07-27 06:56:57,310 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=40 pTM=0.312 ipTM=0.142
2024-07-27 06:57:14,557 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=40.6 pTM=0.316 ipTM=0.148 tol=15.1
2024-07-27 06:57:31,820 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.1 pTM=0.314 ipTM=0.166 tol=8.14
2024-07-27 06:57:49,096 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41 pTM=0.315 ipTM=0.183 tol=8.62
2024-07-27 06:58:06,370 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.1 pTM=0.32 ipTM=0.209 tol=6
2024-07-27 06:58:23,642 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.2 pTM=0.321 ipTM=0.224 tol=6.23
2024-07-27 06:58:40,903 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.4 pTM=0.324 ipTM=0.238 tol=5.07
2024-07-27 06:58:58,157 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.6 pTM=0.326 ipTM=0.254 tol=5.76
2024-07-27 06:59:15,420 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.5 pTM=0.326 ipTM=0.263 tol=11.3
2024-07-27 06:59:32,678 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.6 pTM=0.325 ipTM=0.251 tol=5.5
2024-07-27 06:59:49,922 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.6 pTM=0.331 ipTM=0.268 tol=7.89
2024-07-27 07:00:07,158 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.8 pTM=0.331 ipTM=0.268 tol=4.18
2024-07-27 07:00:24,402 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.8 pTM=0.331 ipTM=0.277 tol=3.82
2024-07-27 07:00:41,639 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.8 pTM=0.33 ipTM=0.279 tol=3.13
2024-07-27 07:00:58,860 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.8 pTM=0.332 ipTM=0.293 tol=2.96
2024-07-27 07:01:16,070 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.7 pTM=0.331 ipTM=0.287 tol=3
2024-07-27 07:01:33,300 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.7 pTM=0.329 ipTM=0.281 tol=2.73
2024-07-27 07:01:50,550 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.8 pTM=0.33 ipTM=0.279 tol=2.19
2024-07-27 07:02:07,804 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.8 pTM=0.329 ipTM=0.299 tol=2.62
2024-07-27 07:02:25,068 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.9 pTM=0.331 ipTM=0.296 tol=2.62
2024-07-27 07:02:42,331 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.8 pTM=0.331 ipTM=0.3 tol=3.24
2024-07-27 07:02:59,591 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.7 pTM=0.33 ipTM=0.299 tol=3.22
2024-07-27 07:03:16,843 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.8 pTM=0.33 ipTM=0.293 tol=7.59
2024-07-27 07:03:34,102 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.8 pTM=0.331 ipTM=0.3 tol=6.5
2024-07-27 07:03:51,379 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.8 pTM=0.331 ipTM=0.302 tol=3.58
2024-07-27 07:04:08,641 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.8 pTM=0.328 ipTM=0.289 tol=6.4
2024-07-27 07:04:25,916 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.8 pTM=0.328 ipTM=0.289 tol=2.71
2024-07-27 07:04:43,187 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.8 pTM=0.329 ipTM=0.289 tol=2.65
2024-07-27 07:05:00,438 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.9 pTM=0.327 ipTM=0.293 tol=1.99
2024-07-27 07:05:17,705 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.8 pTM=0.328 ipTM=0.296 tol=2.09
2024-07-27 07:05:34,975 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42 pTM=0.329 ipTM=0.296 tol=6.66
2024-07-27 07:05:34,976 alphafold2_multimer_v3_model_2_seed_000 took 534.9s (30 recycles)
2024-07-27 07:05:52,896 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.3 pTM=0.311 ipTM=0.167
2024-07-27 07:06:10,331 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.6 pTM=0.32 ipTM=0.187 tol=18
2024-07-27 07:06:27,795 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.8 pTM=0.32 ipTM=0.169 tol=12.3
2024-07-27 07:06:45,235 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.2 pTM=0.32 ipTM=0.155 tol=10.4
2024-07-27 07:07:02,660 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.6 pTM=0.32 ipTM=0.152 tol=7.88
2024-07-27 07:07:20,087 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.9 pTM=0.322 ipTM=0.172 tol=6.56
2024-07-27 07:07:37,493 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.7 pTM=0.322 ipTM=0.176 tol=5.64
2024-07-27 07:07:54,922 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.9 pTM=0.323 ipTM=0.174 tol=4.87
2024-07-27 07:08:12,342 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.7 pTM=0.325 ipTM=0.184 tol=5.47
2024-07-27 07:08:29,753 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.7 pTM=0.321 ipTM=0.174 tol=5.28
2024-07-27 07:08:47,147 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.7 pTM=0.325 ipTM=0.188 tol=4.53
2024-07-27 07:09:04,552 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.6 pTM=0.322 ipTM=0.181 tol=3.61
2024-07-27 07:09:21,978 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.6 pTM=0.321 ipTM=0.172 tol=4.35
2024-07-27 07:09:39,399 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.9 pTM=0.321 ipTM=0.167 tol=4.88
2024-07-27 07:09:56,800 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.9 pTM=0.322 ipTM=0.182 tol=4.12
2024-07-27 07:10:14,211 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.8 pTM=0.32 ipTM=0.182 tol=4.33
2024-07-27 07:10:31,607 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.1 pTM=0.323 ipTM=0.19 tol=4.19
2024-07-27 07:10:49,009 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.7 pTM=0.322 ipTM=0.186 tol=3.76
2024-07-27 07:11:06,409 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.9 pTM=0.322 ipTM=0.171 tol=5.67
2024-07-27 07:11:23,814 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.8 pTM=0.322 ipTM=0.169 tol=3.49
2024-07-27 07:11:41,198 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.7 pTM=0.322 ipTM=0.173 tol=3.34
2024-07-27 07:11:58,606 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.8 pTM=0.324 ipTM=0.174 tol=3.06
2024-07-27 07:12:16,015 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.7 pTM=0.323 ipTM=0.173 tol=7.09
2024-07-27 07:12:33,449 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.8 pTM=0.323 ipTM=0.176 tol=6.26
2024-07-27 07:12:50,891 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.7 pTM=0.321 ipTM=0.175 tol=3.21
2024-07-27 07:13:08,313 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42 pTM=0.322 ipTM=0.174 tol=4.15
2024-07-27 07:13:25,751 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.2 pTM=0.322 ipTM=0.174 tol=3.64
2024-07-27 07:13:43,194 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.1 pTM=0.322 ipTM=0.179 tol=4.54
2024-07-27 07:14:00,644 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.4 pTM=0.322 ipTM=0.165 tol=11.1
2024-07-27 07:14:18,106 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.2 pTM=0.321 ipTM=0.16 tol=9.65
2024-07-27 07:14:35,553 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.3 pTM=0.323 ipTM=0.177 tol=5.66
2024-07-27 07:14:35,554 alphafold2_multimer_v3_model_3_seed_000 took 540.1s (30 recycles)
2024-07-27 07:14:53,356 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38.6 pTM=0.329 ipTM=0.304
2024-07-27 07:15:10,701 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.1 pTM=0.313 ipTM=0.197 tol=24.1
2024-07-27 07:15:28,065 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.3 pTM=0.31 ipTM=0.179 tol=12.9
2024-07-27 07:15:45,412 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.6 pTM=0.311 ipTM=0.178 tol=6.59
2024-07-27 07:16:02,769 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=40 pTM=0.312 ipTM=0.185 tol=10.5
2024-07-27 07:16:20,138 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.9 pTM=0.312 ipTM=0.191 tol=9.8
2024-07-27 07:16:37,482 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.1 pTM=0.313 ipTM=0.202 tol=4.96
2024-07-27 07:16:54,841 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=40.1 pTM=0.314 ipTM=0.204 tol=3.59
2024-07-27 07:17:12,201 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.2 pTM=0.314 ipTM=0.2 tol=3.68
2024-07-27 07:17:29,553 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=40.3 pTM=0.314 ipTM=0.208 tol=3.09
2024-07-27 07:17:46,875 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.2 pTM=0.314 ipTM=0.193 tol=4.01
2024-07-27 07:18:04,214 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=40.2 pTM=0.314 ipTM=0.201 tol=9.22
2024-07-27 07:18:21,548 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=40.5 pTM=0.316 ipTM=0.217 tol=8.8
2024-07-27 07:18:38,891 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40.5 pTM=0.313 ipTM=0.205 tol=6.72
2024-07-27 07:18:56,236 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.6 pTM=0.312 ipTM=0.2 tol=6
2024-07-27 07:19:13,580 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.5 pTM=0.31 ipTM=0.2 tol=8.46
2024-07-27 07:19:30,930 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.6 pTM=0.312 ipTM=0.212 tol=6.48
2024-07-27 07:19:48,262 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.3 pTM=0.312 ipTM=0.2 tol=4.17
2024-07-27 07:20:05,600 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.6 pTM=0.313 ipTM=0.211 tol=8.17
2024-07-27 07:20:22,964 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.8 pTM=0.313 ipTM=0.225 tol=6.07
2024-07-27 07:20:40,291 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.7 pTM=0.315 ipTM=0.213 tol=8.54
2024-07-27 07:20:57,602 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.5 pTM=0.316 ipTM=0.239 tol=8.16
2024-07-27 07:21:14,929 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.4 pTM=0.315 ipTM=0.204 tol=4.2
2024-07-27 07:21:32,262 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.3 pTM=0.315 ipTM=0.209 tol=4.16
2024-07-27 07:21:49,600 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.6 pTM=0.315 ipTM=0.229 tol=6.71
2024-07-27 07:22:06,934 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=40.4 pTM=0.314 ipTM=0.212 tol=6.94
2024-07-27 07:22:24,275 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=40.5 pTM=0.316 ipTM=0.215 tol=4.08
2024-07-27 07:22:41,626 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.6 pTM=0.315 ipTM=0.225 tol=3.26
2024-07-27 07:22:58,963 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=40.8 pTM=0.315 ipTM=0.226 tol=5.96
2024-07-27 07:23:16,288 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.4 pTM=0.314 ipTM=0.212 tol=2.81
2024-07-27 07:23:33,632 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.7 pTM=0.315 ipTM=0.202 tol=3.59
2024-07-27 07:23:33,633 alphafold2_multimer_v3_model_4_seed_000 took 537.6s (30 recycles)
2024-07-27 07:23:51,585 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=39.9 pTM=0.338 ipTM=0.274
2024-07-27 07:24:09,046 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.6 pTM=0.322 ipTM=0.203 tol=14.1
2024-07-27 07:24:26,523 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.8 pTM=0.319 ipTM=0.184 tol=8.92
2024-07-27 07:24:44,014 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41.5 pTM=0.315 ipTM=0.155 tol=15
2024-07-27 07:25:01,512 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.8 pTM=0.314 ipTM=0.151 tol=12.3
2024-07-27 07:25:19,023 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.7 pTM=0.315 ipTM=0.149 tol=7.44
2024-07-27 07:25:36,500 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.6 pTM=0.315 ipTM=0.166 tol=14.4
2024-07-27 07:25:53,977 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.9 pTM=0.321 ipTM=0.221 tol=8.16
2024-07-27 07:26:11,457 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.1 pTM=0.324 ipTM=0.268 tol=9.66
2024-07-27 07:26:28,914 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.3 pTM=0.326 ipTM=0.272 tol=6.96
2024-07-27 07:26:46,363 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.3 pTM=0.329 ipTM=0.286 tol=10.1
2024-07-27 07:27:03,827 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.1 pTM=0.327 ipTM=0.283 tol=7.32
2024-07-27 07:27:21,267 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.1 pTM=0.329 ipTM=0.279 tol=9.76
2024-07-27 07:27:38,713 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.5 pTM=0.331 ipTM=0.301 tol=8.44
2024-07-27 07:27:56,157 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.3 pTM=0.33 ipTM=0.277 tol=5.96
2024-07-27 07:28:13,583 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.4 pTM=0.332 ipTM=0.316 tol=3.88
2024-07-27 07:28:31,024 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.2 pTM=0.33 ipTM=0.271 tol=3.3
2024-07-27 07:28:48,465 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.1 pTM=0.33 ipTM=0.278 tol=4.3
2024-07-27 07:29:05,883 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.1 pTM=0.331 ipTM=0.287 tol=4.4
2024-07-27 07:29:23,324 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.4 pTM=0.333 ipTM=0.338 tol=8.22
2024-07-27 07:29:40,740 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.3 pTM=0.333 ipTM=0.29 tol=7.74
2024-07-27 07:29:58,167 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.4 pTM=0.333 ipTM=0.311 tol=4.47
2024-07-27 07:30:15,598 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.2 pTM=0.333 ipTM=0.289 tol=5.33
2024-07-27 07:30:33,038 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.3 pTM=0.333 ipTM=0.293 tol=4.63
2024-07-27 07:30:50,466 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.2 pTM=0.331 ipTM=0.28 tol=3.42
2024-07-27 07:31:07,893 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.4 pTM=0.331 ipTM=0.27 tol=6.15
2024-07-27 07:31:25,319 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.6 pTM=0.331 ipTM=0.297 tol=3.25
2024-07-27 07:31:42,735 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.3 pTM=0.33 ipTM=0.278 tol=3.63
2024-07-27 07:32:00,159 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.7 pTM=0.331 ipTM=0.295 tol=2.35
2024-07-27 07:32:17,605 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.3 pTM=0.331 ipTM=0.28 tol=2.59
2024-07-27 07:32:35,046 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.6 pTM=0.332 ipTM=0.295 tol=5.78
2024-07-27 07:32:35,047 alphafold2_multimer_v3_model_5_seed_000 took 540.9s (30 recycles)
2024-07-27 07:32:35,561 reranking models by 'multimer' metric
2024-07-27 07:32:38,911 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 07:33:35,204 Relaxation took 59.6s
2024-07-27 07:33:35,205 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.6 pTM=0.332 ipTM=0.295
2024-07-27 07:34:39,207 Relaxation took 64.0s
2024-07-27 07:34:39,207 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42 pTM=0.329 ipTM=0.296
2024-07-27 07:36:00,829 Relaxation took 81.6s
2024-07-27 07:36:00,829 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.8 pTM=0.329 ipTM=0.236
2024-07-27 07:37:02,165 Relaxation took 61.3s
2024-07-27 07:37:02,165 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.7 pTM=0.315 ipTM=0.202
2024-07-27 07:37:56,575 Relaxation took 54.4s
2024-07-27 07:37:56,575 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.3 pTM=0.323 ipTM=0.177
2024-07-27 07:37:58,262 Done