2024-07-27 06:52:31,333 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 06:52:31,653 Running on GPU
2024-07-27 06:52:34,973 Found 6 citations for tools or databases
2024-07-27 06:52:34,973 Query 1/1: PJA1_SPSB2 (length 907)
2024-07-27 06:52:35,430 Sleeping for 5s. Reason: PENDING
2024-07-27 06:52:40,859 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:52:50,277 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:52:56,692 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:53:02,101 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:53:10,520 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:53:19,984 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:53:25,431 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:53:33,855 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:53:41,300 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:53:48,722 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:53:57,156 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:54:03,582 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:54:10,725 Sleeping for 6s. Reason: PENDING
2024-07-27 06:54:17,152 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:54:24,577 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:54:32,009 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:54:39,422 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:54:46,880 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:54:57,327 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:55:04,762 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:55:18,578 Setting max_seq=508, max_extra_seq=2048
2024-07-27 06:58:45,473 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.7 pTM=0.314 ipTM=0.215
2024-07-27 06:59:02,637 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.8 pTM=0.328 ipTM=0.583 tol=20.1
2024-07-27 06:59:19,847 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=40.8 pTM=0.329 ipTM=0.494 tol=8.81
2024-07-27 06:59:37,106 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40.6 pTM=0.323 ipTM=0.427 tol=7.55
2024-07-27 06:59:54,416 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41 pTM=0.326 ipTM=0.461 tol=7.24
2024-07-27 07:00:11,751 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.2 pTM=0.326 ipTM=0.47 tol=3.17
2024-07-27 07:00:29,113 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41 pTM=0.324 ipTM=0.443 tol=6.62
2024-07-27 07:00:46,492 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41 pTM=0.324 ipTM=0.455 tol=5.35
2024-07-27 07:01:03,873 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=40.9 pTM=0.324 ipTM=0.448 tol=3.37
2024-07-27 07:01:21,283 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.1 pTM=0.324 ipTM=0.445 tol=3.88
2024-07-27 07:01:38,714 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=40.8 pTM=0.323 ipTM=0.425 tol=3.16
2024-07-27 07:01:56,136 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=40.9 pTM=0.324 ipTM=0.441 tol=3.12
2024-07-27 07:02:13,580 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=40.8 pTM=0.323 ipTM=0.421 tol=3.43
2024-07-27 07:02:31,001 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=40.8 pTM=0.325 ipTM=0.452 tol=2.54
2024-07-27 07:02:48,426 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=40.8 pTM=0.325 ipTM=0.465 tol=2.98
2024-07-27 07:03:05,853 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=40.6 pTM=0.323 ipTM=0.427 tol=3.75
2024-07-27 07:03:23,288 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=40.6 pTM=0.324 ipTM=0.442 tol=3.76
2024-07-27 07:03:40,740 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=40.7 pTM=0.325 ipTM=0.444 tol=3.84
2024-07-27 07:03:58,181 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41 pTM=0.325 ipTM=0.458 tol=9.98
2024-07-27 07:04:15,623 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41 pTM=0.325 ipTM=0.43 tol=9.02
2024-07-27 07:04:33,074 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=40.9 pTM=0.325 ipTM=0.456 tol=4.37
2024-07-27 07:04:50,528 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=40.9 pTM=0.325 ipTM=0.45 tol=7.17
2024-07-27 07:05:07,987 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=40.8 pTM=0.324 ipTM=0.435 tol=3.03
2024-07-27 07:05:25,444 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=40.9 pTM=0.325 ipTM=0.438 tol=6.63
2024-07-27 07:05:42,904 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=40.4 pTM=0.323 ipTM=0.43 tol=3.63
2024-07-27 07:06:00,356 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=40.8 pTM=0.324 ipTM=0.465 tol=6.45
2024-07-27 07:06:17,807 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=40.6 pTM=0.324 ipTM=0.445 tol=3.29
2024-07-27 07:06:35,246 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=40.9 pTM=0.326 ipTM=0.465 tol=6.93
2024-07-27 07:06:52,712 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=40.9 pTM=0.324 ipTM=0.444 tol=3.2
2024-07-27 07:07:10,169 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=40.8 pTM=0.325 ipTM=0.438 tol=4.05
2024-07-27 07:07:27,624 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41 pTM=0.325 ipTM=0.446 tol=4.38
2024-07-27 07:07:27,625 alphafold2_multimer_v3_model_1_seed_000 took 723.9s (30 recycles)
2024-07-27 07:07:45,531 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=40.9 pTM=0.317 ipTM=0.149
2024-07-27 07:08:02,974 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.1 pTM=0.326 ipTM=0.429 tol=20.5
2024-07-27 07:08:20,431 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=41.5 pTM=0.33 ipTM=0.477 tol=9.32
2024-07-27 07:08:37,920 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=41.3 pTM=0.325 ipTM=0.365 tol=9.15
2024-07-27 07:08:55,418 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=41.6 pTM=0.324 ipTM=0.313 tol=6.05
2024-07-27 07:09:12,895 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=41.6 pTM=0.323 ipTM=0.321 tol=4.27
2024-07-27 07:09:30,366 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41.2 pTM=0.323 ipTM=0.299 tol=7.93
2024-07-27 07:09:47,839 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=41.4 pTM=0.323 ipTM=0.31 tol=5.08
2024-07-27 07:10:05,308 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41.2 pTM=0.323 ipTM=0.289 tol=5.15
2024-07-27 07:10:22,805 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=41.3 pTM=0.323 ipTM=0.279 tol=4.36
2024-07-27 07:10:40,287 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=41.2 pTM=0.323 ipTM=0.289 tol=4.99
2024-07-27 07:10:57,720 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.2 pTM=0.323 ipTM=0.302 tol=4.01
2024-07-27 07:11:15,151 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41.2 pTM=0.323 ipTM=0.271 tol=4.16
2024-07-27 07:11:32,608 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.2 pTM=0.324 ipTM=0.32 tol=4.94
2024-07-27 07:11:50,040 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.3 pTM=0.325 ipTM=0.339 tol=3.62
2024-07-27 07:12:07,522 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.2 pTM=0.325 ipTM=0.308 tol=3.74
2024-07-27 07:12:24,972 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.2 pTM=0.325 ipTM=0.309 tol=4.4
2024-07-27 07:12:42,416 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.5 pTM=0.325 ipTM=0.312 tol=2.95
2024-07-27 07:12:59,870 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.8 pTM=0.323 ipTM=0.323 tol=3.32
2024-07-27 07:13:17,331 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.6 pTM=0.324 ipTM=0.309 tol=6.7
2024-07-27 07:13:34,811 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.2 pTM=0.324 ipTM=0.321 tol=6.85
2024-07-27 07:13:52,259 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.4 pTM=0.324 ipTM=0.325 tol=6.87
2024-07-27 07:14:09,707 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.5 pTM=0.322 ipTM=0.282 tol=4.87
2024-07-27 07:14:27,180 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.5 pTM=0.322 ipTM=0.278 tol=7.1
2024-07-27 07:14:44,646 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.2 pTM=0.323 ipTM=0.314 tol=5.44
2024-07-27 07:15:02,101 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.4 pTM=0.323 ipTM=0.313 tol=3.81
2024-07-27 07:15:19,557 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.3 pTM=0.324 ipTM=0.315 tol=4.26
2024-07-27 07:15:37,009 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.8 pTM=0.325 ipTM=0.362 tol=3.99
2024-07-27 07:15:54,471 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.7 pTM=0.323 ipTM=0.329 tol=3.96
2024-07-27 07:16:11,956 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.2 pTM=0.323 ipTM=0.312 tol=4.89
2024-07-27 07:16:29,414 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.6 pTM=0.322 ipTM=0.309 tol=3.48
2024-07-27 07:16:29,414 alphafold2_multimer_v3_model_2_seed_000 took 541.3s (30 recycles)
2024-07-27 07:16:47,509 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.8 pTM=0.319 ipTM=0.276
2024-07-27 07:17:05,107 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.6 pTM=0.327 ipTM=0.473 tol=15.7
2024-07-27 07:17:22,703 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.7 pTM=0.325 ipTM=0.489 tol=9.54
2024-07-27 07:17:40,310 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.6 pTM=0.326 ipTM=0.506 tol=9.32
2024-07-27 07:17:57,929 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42 pTM=0.327 ipTM=0.52 tol=4.32
2024-07-27 07:18:15,553 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.9 pTM=0.328 ipTM=0.511 tol=5.71
2024-07-27 07:18:33,194 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.8 pTM=0.327 ipTM=0.516 tol=5.95
2024-07-27 07:18:50,810 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.6 pTM=0.33 ipTM=0.521 tol=4.66
2024-07-27 07:19:08,426 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.8 pTM=0.331 ipTM=0.507 tol=3.62
2024-07-27 07:19:26,047 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.9 pTM=0.334 ipTM=0.507 tol=3.94
2024-07-27 07:19:43,642 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.9 pTM=0.334 ipTM=0.502 tol=3.75
2024-07-27 07:20:01,245 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.5 pTM=0.332 ipTM=0.508 tol=4.94
2024-07-27 07:20:18,834 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.8 pTM=0.335 ipTM=0.506 tol=3.27
2024-07-27 07:20:36,408 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.6 pTM=0.336 ipTM=0.516 tol=3.53
2024-07-27 07:20:54,036 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.9 pTM=0.332 ipTM=0.521 tol=3.8
2024-07-27 07:21:11,629 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.5 pTM=0.335 ipTM=0.501 tol=4.73
2024-07-27 07:21:29,230 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.6 pTM=0.332 ipTM=0.514 tol=4.25
2024-07-27 07:21:46,822 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.8 pTM=0.334 ipTM=0.5 tol=5.06
2024-07-27 07:22:04,412 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.1 pTM=0.333 ipTM=0.513 tol=4.2
2024-07-27 07:22:22,001 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.8 pTM=0.333 ipTM=0.501 tol=6.91
2024-07-27 07:22:39,592 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.7 pTM=0.333 ipTM=0.523 tol=5.15
2024-07-27 07:22:57,184 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.7 pTM=0.334 ipTM=0.529 tol=4.33
2024-07-27 07:23:14,786 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.9 pTM=0.329 ipTM=0.5 tol=4.73
2024-07-27 07:23:32,384 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.7 pTM=0.33 ipTM=0.48 tol=4.03
2024-07-27 07:23:49,974 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.4 pTM=0.332 ipTM=0.497 tol=5.03
2024-07-27 07:24:07,573 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.8 pTM=0.334 ipTM=0.488 tol=5.85
2024-07-27 07:24:25,204 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.6 pTM=0.333 ipTM=0.502 tol=4.67
2024-07-27 07:24:42,834 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.7 pTM=0.333 ipTM=0.51 tol=4.17
2024-07-27 07:25:00,476 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42 pTM=0.332 ipTM=0.492 tol=3.94
2024-07-27 07:25:18,085 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.5 pTM=0.332 ipTM=0.5 tol=4.86
2024-07-27 07:25:35,705 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.9 pTM=0.334 ipTM=0.5 tol=4.4
2024-07-27 07:25:35,705 alphafold2_multimer_v3_model_3_seed_000 took 545.8s (30 recycles)
2024-07-27 07:25:53,738 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.6 pTM=0.309 ipTM=0.182
2024-07-27 07:26:11,331 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.3 pTM=0.326 ipTM=0.283 tol=23.4
2024-07-27 07:26:28,932 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.2 pTM=0.317 ipTM=0.224 tol=18.9
2024-07-27 07:26:46,559 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=38.9 pTM=0.305 ipTM=0.188 tol=23.7
2024-07-27 07:27:04,127 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.4 pTM=0.313 ipTM=0.208 tol=16.8
2024-07-27 07:27:21,711 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.3 pTM=0.31 ipTM=0.189 tol=11.9
2024-07-27 07:27:39,278 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.7 pTM=0.315 ipTM=0.217 tol=9.2
2024-07-27 07:27:56,850 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.5 pTM=0.309 ipTM=0.191 tol=11.6
2024-07-27 07:28:14,418 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.6 pTM=0.317 ipTM=0.231 tol=13.9
2024-07-27 07:28:32,008 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39.7 pTM=0.309 ipTM=0.189 tol=12
2024-07-27 07:28:49,619 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.5 pTM=0.319 ipTM=0.242 tol=11.9
2024-07-27 07:29:07,211 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.4 pTM=0.312 ipTM=0.203 tol=11
2024-07-27 07:29:24,782 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.6 pTM=0.318 ipTM=0.211 tol=10.5
2024-07-27 07:29:42,357 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.7 pTM=0.318 ipTM=0.39 tol=11.2
2024-07-27 07:29:59,943 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.1 pTM=0.318 ipTM=0.346 tol=9.06
2024-07-27 07:30:17,520 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39.7 pTM=0.317 ipTM=0.327 tol=5.31
2024-07-27 07:30:35,108 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40 pTM=0.32 ipTM=0.299 tol=6.47
2024-07-27 07:30:52,695 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.7 pTM=0.317 ipTM=0.333 tol=9.02
2024-07-27 07:31:10,301 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.2 pTM=0.318 ipTM=0.326 tol=7.04
2024-07-27 07:31:27,901 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.8 pTM=0.315 ipTM=0.29 tol=4.57
2024-07-27 07:31:45,458 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.9 pTM=0.32 ipTM=0.356 tol=12.5
2024-07-27 07:32:03,007 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.1 pTM=0.316 ipTM=0.325 tol=12.4
2024-07-27 07:32:20,608 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.2 pTM=0.32 ipTM=0.371 tol=8.99
2024-07-27 07:32:38,170 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.1 pTM=0.317 ipTM=0.311 tol=6.99
2024-07-27 07:32:55,734 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.1 pTM=0.32 ipTM=0.367 tol=10.2
2024-07-27 07:33:13,289 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.7 pTM=0.319 ipTM=0.323 tol=9.27
2024-07-27 07:33:30,837 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.8 pTM=0.319 ipTM=0.34 tol=10.4
2024-07-27 07:33:48,412 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.8 pTM=0.319 ipTM=0.341 tol=10.8
2024-07-27 07:34:05,976 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.7 pTM=0.319 ipTM=0.368 tol=8.72
2024-07-27 07:34:23,524 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40 pTM=0.319 ipTM=0.318 tol=12.6
2024-07-27 07:34:41,080 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40 pTM=0.321 ipTM=0.389 tol=7.26
2024-07-27 07:34:41,081 alphafold2_multimer_v3_model_4_seed_000 took 544.9s (30 recycles)
2024-07-27 07:34:59,217 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=40.2 pTM=0.31 ipTM=0.151
2024-07-27 07:35:16,869 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.6 pTM=0.319 ipTM=0.407 tol=23.4
2024-07-27 07:35:34,533 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.9 pTM=0.323 ipTM=0.426 tol=14.3
2024-07-27 07:35:52,193 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.8 pTM=0.319 ipTM=0.313 tol=7.77
2024-07-27 07:36:09,861 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=40.8 pTM=0.326 ipTM=0.339 tol=12.8
2024-07-27 07:36:27,535 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40.8 pTM=0.325 ipTM=0.342 tol=10.7
2024-07-27 07:36:45,224 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.9 pTM=0.329 ipTM=0.345 tol=9.32
2024-07-27 07:37:02,893 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=40.9 pTM=0.326 ipTM=0.408 tol=8.68
2024-07-27 07:37:20,569 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=40.7 pTM=0.333 ipTM=0.352 tol=8.5
2024-07-27 07:37:38,253 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=40.8 pTM=0.331 ipTM=0.36 tol=7.32
2024-07-27 07:37:55,917 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=40.8 pTM=0.332 ipTM=0.352 tol=9.97
2024-07-27 07:38:13,574 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=40.7 pTM=0.332 ipTM=0.376 tol=5.5
2024-07-27 07:38:31,245 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=40.7 pTM=0.333 ipTM=0.308 tol=5.16
2024-07-27 07:38:48,891 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=40.7 pTM=0.332 ipTM=0.438 tol=7.87
2024-07-27 07:39:06,550 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=40.7 pTM=0.331 ipTM=0.348 tol=7.73
2024-07-27 07:39:24,200 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=40.5 pTM=0.334 ipTM=0.382 tol=5.88
2024-07-27 07:39:41,846 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.2 pTM=0.332 ipTM=0.529 tol=5.05
2024-07-27 07:39:59,504 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.6 pTM=0.326 ipTM=0.498 tol=17.6
2024-07-27 07:40:17,149 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.1 pTM=0.329 ipTM=0.516 tol=7.37
2024-07-27 07:40:34,788 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.3 pTM=0.329 ipTM=0.524 tol=5.29
2024-07-27 07:40:52,407 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.1 pTM=0.332 ipTM=0.542 tol=6.67
2024-07-27 07:41:10,031 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.2 pTM=0.328 ipTM=0.535 tol=6.68
2024-07-27 07:41:27,689 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.4 pTM=0.329 ipTM=0.513 tol=3.51
2024-07-27 07:41:45,355 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.2 pTM=0.328 ipTM=0.498 tol=5.7
2024-07-27 07:42:02,991 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.7 pTM=0.331 ipTM=0.501 tol=4.01
2024-07-27 07:42:20,651 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.9 pTM=0.329 ipTM=0.514 tol=6.52
2024-07-27 07:42:38,297 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.7 pTM=0.331 ipTM=0.506 tol=5.29
2024-07-27 07:42:55,935 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=41.8 pTM=0.33 ipTM=0.523 tol=7.3
2024-07-27 07:43:13,594 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.3 pTM=0.331 ipTM=0.511 tol=7.27
2024-07-27 07:43:31,246 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.6 pTM=0.331 ipTM=0.517 tol=6.71
2024-07-27 07:43:48,886 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42 pTM=0.331 ipTM=0.516 tol=6.37
2024-07-27 07:43:48,887 alphafold2_multimer_v3_model_5_seed_000 took 547.3s (30 recycles)
2024-07-27 07:43:49,394 reranking models by 'multimer' metric
2024-07-27 07:43:51,259 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 07:45:41,168 Relaxation took 111.8s
2024-07-27 07:45:41,168 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42 pTM=0.331 ipTM=0.516
2024-07-27 07:46:46,255 Relaxation took 65.1s
2024-07-27 07:46:46,255 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.9 pTM=0.334 ipTM=0.5
2024-07-27 07:48:18,752 Relaxation took 92.5s
2024-07-27 07:48:18,752 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41 pTM=0.325 ipTM=0.446
2024-07-27 07:49:29,162 Relaxation took 70.4s
2024-07-27 07:49:29,162 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40 pTM=0.321 ipTM=0.389
2024-07-27 07:50:27,441 Relaxation took 58.3s
2024-07-27 07:50:27,441 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.6 pTM=0.322 ipTM=0.309
2024-07-27 07:50:29,114 Done