2024-07-27 06:56:03,284 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 06:56:03,657 Running on GPU
2024-07-27 06:56:07,122 Found 6 citations for tools or databases
2024-07-27 06:56:07,122 Query 1/1: PJA1_WSB2 (length 1048)
2024-07-27 06:56:07,611 Sleeping for 7s. Reason: PENDING
2024-07-27 06:56:15,040 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:56:25,491 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:56:34,926 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:56:43,350 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:56:51,773 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:56:59,189 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:57:07,605 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:57:13,051 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:57:21,492 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:57:26,906 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:57:36,337 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:57:44,766 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:57:52,200 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:57:58,615 Sleeping for 9s. Reason: RUNNING
2024-07-27 06:58:08,045 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:58:14,485 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:58:24,907 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:58:31,332 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:58:38,736 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:58:44,155 Sleeping for 5s. Reason: RUNNING
2024-07-27 06:58:49,592 Sleeping for 7s. Reason: RUNNING
2024-07-27 06:58:57,001 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:59:07,311 Sleeping for 9s. Reason: PENDING
2024-07-27 06:59:16,727 Sleeping for 8s. Reason: RUNNING
2024-07-27 06:59:25,145 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:59:35,581 Sleeping for 10s. Reason: RUNNING
2024-07-27 06:59:45,997 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:59:52,404 Sleeping for 6s. Reason: RUNNING
2024-07-27 06:59:58,827 Sleeping for 5s. Reason: RUNNING
2024-07-27 07:00:04,238 Sleeping for 9s. Reason: RUNNING
2024-07-27 07:00:13,671 Sleeping for 9s. Reason: RUNNING
2024-07-27 07:00:23,104 Sleeping for 7s. Reason: RUNNING
2024-07-27 07:00:30,535 Sleeping for 8s. Reason: RUNNING
2024-07-27 07:00:44,212 Setting max_seq=508, max_extra_seq=2048
2024-07-27 07:03:46,848 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.2 pTM=0.479 ipTM=0.507
2024-07-27 07:04:12,537 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.6 pTM=0.47 ipTM=0.458 tol=12.5
2024-07-27 07:04:38,324 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.6 pTM=0.454 ipTM=0.26 tol=7.68
2024-07-27 07:05:04,192 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.6 pTM=0.452 ipTM=0.243 tol=6.73
2024-07-27 07:05:30,108 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.8 pTM=0.455 ipTM=0.307 tol=4.65
2024-07-27 07:05:56,064 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.4 pTM=0.458 ipTM=0.28 tol=13.1
2024-07-27 07:06:22,038 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.9 pTM=0.458 ipTM=0.365 tol=12.1
2024-07-27 07:06:48,020 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.2 pTM=0.463 ipTM=0.451 tol=9.45
2024-07-27 07:07:13,990 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.5 pTM=0.465 ipTM=0.601 tol=7.7
2024-07-27 07:07:39,982 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.8 pTM=0.468 ipTM=0.676 tol=4.34
2024-07-27 07:08:05,985 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48 pTM=0.472 ipTM=0.686 tol=2.71
2024-07-27 07:08:31,965 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.3 pTM=0.474 ipTM=0.701 tol=4.95
2024-07-27 07:08:57,959 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.3 pTM=0.472 ipTM=0.705 tol=4.18
2024-07-27 07:09:23,944 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.3 pTM=0.473 ipTM=0.703 tol=1.64
2024-07-27 07:09:49,942 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.2 pTM=0.469 ipTM=0.711 tol=3.52
2024-07-27 07:10:15,935 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.2 pTM=0.475 ipTM=0.71 tol=3.67
2024-07-27 07:10:41,914 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.1 pTM=0.473 ipTM=0.705 tol=3.72
2024-07-27 07:11:07,895 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.2 pTM=0.476 ipTM=0.703 tol=2.14
2024-07-27 07:11:33,887 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=48.4 pTM=0.478 ipTM=0.712 tol=2.6
2024-07-27 07:11:59,893 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.4 pTM=0.479 ipTM=0.706 tol=5.92
2024-07-27 07:12:25,883 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.2 pTM=0.476 ipTM=0.704 tol=3.52
2024-07-27 07:12:51,871 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.2 pTM=0.477 ipTM=0.707 tol=3.83
2024-07-27 07:13:17,863 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.3 pTM=0.478 ipTM=0.709 tol=5.56
2024-07-27 07:13:43,846 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.3 pTM=0.482 ipTM=0.713 tol=4.74
2024-07-27 07:14:09,835 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.4 pTM=0.481 ipTM=0.71 tol=9.38
2024-07-27 07:14:35,816 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.5 pTM=0.487 ipTM=0.716 tol=5.82
2024-07-27 07:15:01,780 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.2 pTM=0.499 ipTM=0.714 tol=4.59
2024-07-27 07:15:27,757 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.7 pTM=0.506 ipTM=0.712 tol=4
2024-07-27 07:15:53,741 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.2 pTM=0.513 ipTM=0.712 tol=3.54
2024-07-27 07:16:19,721 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.3 pTM=0.516 ipTM=0.717 tol=2.32
2024-07-27 07:16:45,694 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.1 pTM=0.513 ipTM=0.742 tol=7.23
2024-07-27 07:16:45,694 alphafold2_multimer_v3_model_1_seed_000 took 954.6s (30 recycles)
2024-07-27 07:17:12,729 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.6 pTM=0.455 ipTM=0.239
2024-07-27 07:17:38,761 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.8 pTM=0.474 ipTM=0.431 tol=16.7
2024-07-27 07:18:04,774 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.3 pTM=0.467 ipTM=0.395 tol=6.77
2024-07-27 07:18:30,828 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.3 pTM=0.464 ipTM=0.355 tol=6.42
2024-07-27 07:18:56,886 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.3 pTM=0.464 ipTM=0.388 tol=4.38
2024-07-27 07:19:22,937 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.2 pTM=0.458 ipTM=0.424 tol=4.99
2024-07-27 07:19:49,007 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48 pTM=0.455 ipTM=0.402 tol=3.95
2024-07-27 07:20:15,060 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48 pTM=0.454 ipTM=0.406 tol=5.26
2024-07-27 07:20:41,108 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.8 pTM=0.451 ipTM=0.408 tol=7.02
2024-07-27 07:21:07,166 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.8 pTM=0.449 ipTM=0.377 tol=2.83
2024-07-27 07:21:33,217 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.9 pTM=0.45 ipTM=0.386 tol=3.52
2024-07-27 07:21:59,276 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.9 pTM=0.45 ipTM=0.412 tol=6.5
2024-07-27 07:22:25,333 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.9 pTM=0.45 ipTM=0.404 tol=7
2024-07-27 07:22:51,390 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.9 pTM=0.45 ipTM=0.402 tol=3.43
2024-07-27 07:23:17,443 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.9 pTM=0.449 ipTM=0.386 tol=2.8
2024-07-27 07:23:43,510 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.8 pTM=0.45 ipTM=0.357 tol=6.3
2024-07-27 07:24:09,573 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.7 pTM=0.449 ipTM=0.365 tol=2.81
2024-07-27 07:24:35,629 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.8 pTM=0.45 ipTM=0.387 tol=2.75
2024-07-27 07:25:01,694 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.8 pTM=0.451 ipTM=0.387 tol=2.82
2024-07-27 07:25:27,752 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.8 pTM=0.45 ipTM=0.368 tol=1.98
2024-07-27 07:25:53,824 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.6 pTM=0.447 ipTM=0.383 tol=6.29
2024-07-27 07:26:19,915 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.8 pTM=0.447 ipTM=0.378 tol=3.07
2024-07-27 07:26:45,996 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.6 pTM=0.446 ipTM=0.354 tol=5.81
2024-07-27 07:27:12,092 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.7 pTM=0.446 ipTM=0.36 tol=2.95
2024-07-27 07:27:38,216 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.8 pTM=0.445 ipTM=0.355 tol=7.57
2024-07-27 07:28:04,308 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.6 pTM=0.446 ipTM=0.384 tol=3.25
2024-07-27 07:28:30,380 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.6 pTM=0.447 ipTM=0.405 tol=7.16
2024-07-27 07:28:56,450 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.6 pTM=0.448 ipTM=0.387 tol=7
2024-07-27 07:29:22,511 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.6 pTM=0.448 ipTM=0.374 tol=6.34
2024-07-27 07:29:48,569 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.6 pTM=0.447 ipTM=0.363 tol=3.45
2024-07-27 07:30:14,642 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.5 pTM=0.448 ipTM=0.358 tol=2.42
2024-07-27 07:30:14,643 alphafold2_multimer_v3_model_2_seed_000 took 807.9s (30 recycles)
2024-07-27 07:30:41,631 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.5 pTM=0.454 ipTM=0.284
2024-07-27 07:31:07,797 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.6 pTM=0.45 ipTM=0.295 tol=12.7
2024-07-27 07:31:33,962 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.2 pTM=0.452 ipTM=0.252 tol=8.17
2024-07-27 07:32:00,126 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.3 pTM=0.485 ipTM=0.459 tol=4.89
2024-07-27 07:32:26,304 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.3 pTM=0.484 ipTM=0.52 tol=4.19
2024-07-27 07:32:52,473 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.5 pTM=0.487 ipTM=0.545 tol=3.26
2024-07-27 07:33:18,639 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.4 pTM=0.486 ipTM=0.536 tol=2.89
2024-07-27 07:33:44,820 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.7 pTM=0.491 ipTM=0.57 tol=1.9
2024-07-27 07:34:10,989 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.6 pTM=0.491 ipTM=0.582 tol=1.98
2024-07-27 07:34:37,158 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.7 pTM=0.493 ipTM=0.591 tol=1.36
2024-07-27 07:35:03,349 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.8 pTM=0.497 ipTM=0.597 tol=1.63
2024-07-27 07:35:29,519 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.9 pTM=0.498 ipTM=0.621 tol=1.68
2024-07-27 07:35:55,692 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.9 pTM=0.5 ipTM=0.621 tol=2.18
2024-07-27 07:36:21,857 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.2 pTM=0.503 ipTM=0.638 tol=2.09
2024-07-27 07:36:48,024 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.4 pTM=0.506 ipTM=0.659 tol=6.6
2024-07-27 07:37:14,196 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.4 pTM=0.505 ipTM=0.665 tol=6.05
2024-07-27 07:37:40,353 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.7 pTM=0.507 ipTM=0.664 tol=2.54
2024-07-27 07:38:06,492 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.5 pTM=0.505 ipTM=0.675 tol=1.88
2024-07-27 07:38:32,640 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.7 pTM=0.507 ipTM=0.672 tol=1.94
2024-07-27 07:38:58,769 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.7 pTM=0.507 ipTM=0.678 tol=1.68
2024-07-27 07:39:24,903 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.7 pTM=0.509 ipTM=0.68 tol=1.67
2024-07-27 07:39:51,022 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.6 pTM=0.507 ipTM=0.688 tol=1.15
2024-07-27 07:40:17,147 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.8 pTM=0.511 ipTM=0.69 tol=1.93
2024-07-27 07:40:43,261 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.6 pTM=0.508 ipTM=0.688 tol=1.88
2024-07-27 07:41:09,434 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.8 pTM=0.51 ipTM=0.685 tol=1.82
2024-07-27 07:41:35,570 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.5 pTM=0.508 ipTM=0.678 tol=2.16
2024-07-27 07:42:01,707 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.5 pTM=0.509 ipTM=0.67 tol=1.06
2024-07-27 07:42:27,841 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.6 pTM=0.509 ipTM=0.681 tol=1.32
2024-07-27 07:42:53,967 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.8 pTM=0.508 ipTM=0.667 tol=1.87
2024-07-27 07:43:20,100 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.3 pTM=0.505 ipTM=0.673 tol=2.1
2024-07-27 07:43:46,241 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.5 pTM=0.508 ipTM=0.668 tol=1.71
2024-07-27 07:43:46,242 alphafold2_multimer_v3_model_3_seed_000 took 810.7s (30 recycles)
2024-07-27 07:44:13,164 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.8 pTM=0.477 ipTM=0.46
2024-07-27 07:44:39,232 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.9 pTM=0.466 ipTM=0.386 tol=11.5
2024-07-27 07:45:05,308 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.8 pTM=0.459 ipTM=0.352 tol=9.76
2024-07-27 07:45:31,391 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.9 pTM=0.458 ipTM=0.314 tol=7.88
2024-07-27 07:45:57,492 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.3 pTM=0.463 ipTM=0.385 tol=6.7
2024-07-27 07:46:23,603 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.4 pTM=0.461 ipTM=0.391 tol=7.89
2024-07-27 07:46:49,728 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.4 pTM=0.458 ipTM=0.369 tol=7.14
2024-07-27 07:47:15,844 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.4 pTM=0.462 ipTM=0.371 tol=5.1
2024-07-27 07:47:41,967 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.4 pTM=0.461 ipTM=0.376 tol=4.96
2024-07-27 07:48:08,079 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.4 pTM=0.462 ipTM=0.373 tol=3.95
2024-07-27 07:48:34,214 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47 pTM=0.467 ipTM=0.384 tol=4.45
2024-07-27 07:49:00,340 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.1 pTM=0.467 ipTM=0.396 tol=3.98
2024-07-27 07:49:26,481 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.8 pTM=0.469 ipTM=0.397 tol=4.94
2024-07-27 07:49:52,589 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47 pTM=0.472 ipTM=0.463 tol=3.23
2024-07-27 07:50:18,703 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.6 pTM=0.478 ipTM=0.524 tol=9.95
2024-07-27 07:50:44,829 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.5 pTM=0.474 ipTM=0.479 tol=5.41
2024-07-27 07:51:10,954 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.9 pTM=0.472 ipTM=0.446 tol=6.75
2024-07-27 07:51:37,080 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.9 pTM=0.471 ipTM=0.446 tol=7.3
2024-07-27 07:52:03,192 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.3 pTM=0.476 ipTM=0.444 tol=5.92
2024-07-27 07:52:29,301 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.8 pTM=0.47 ipTM=0.429 tol=13.7
2024-07-27 07:52:55,422 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.9 pTM=0.471 ipTM=0.425 tol=13.5
2024-07-27 07:53:21,501 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.2 pTM=0.475 ipTM=0.44 tol=14.1
2024-07-27 07:53:47,618 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.9 pTM=0.471 ipTM=0.426 tol=11.4
2024-07-27 07:54:13,719 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47 pTM=0.471 ipTM=0.438 tol=9.18
2024-07-27 07:54:39,838 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.1 pTM=0.471 ipTM=0.466 tol=7.48
2024-07-27 07:55:05,948 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47 pTM=0.472 ipTM=0.484 tol=7.67
2024-07-27 07:55:32,062 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.3 pTM=0.475 ipTM=0.454 tol=7.86
2024-07-27 07:55:58,170 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.6 pTM=0.477 ipTM=0.524 tol=6.51
2024-07-27 07:56:24,286 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.3 pTM=0.473 ipTM=0.483 tol=4.96
2024-07-27 07:56:50,411 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47 pTM=0.47 ipTM=0.465 tol=5.41
2024-07-27 07:57:16,544 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.3 pTM=0.475 ipTM=0.463 tol=8.29
2024-07-27 07:57:16,545 alphafold2_multimer_v3_model_4_seed_000 took 809.4s (30 recycles)
2024-07-27 07:57:43,592 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.4 pTM=0.462 ipTM=0.664
2024-07-27 07:58:09,795 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.9 pTM=0.457 ipTM=0.475 tol=13.1
2024-07-27 07:58:36,030 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.3 pTM=0.453 ipTM=0.52 tol=10.1
2024-07-27 07:59:02,286 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.7 pTM=0.453 ipTM=0.546 tol=6.19
2024-07-27 07:59:28,534 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.8 pTM=0.457 ipTM=0.521 tol=5
2024-07-27 07:59:54,798 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.8 pTM=0.452 ipTM=0.502 tol=5.5
2024-07-27 08:00:21,056 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.8 pTM=0.453 ipTM=0.558 tol=6.11
2024-07-27 08:00:47,311 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.6 pTM=0.448 ipTM=0.491 tol=5.72
2024-07-27 08:01:13,564 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.3 pTM=0.444 ipTM=0.438 tol=3.92
2024-07-27 08:01:39,797 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.5 pTM=0.448 ipTM=0.485 tol=5.67
2024-07-27 08:02:06,020 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.4 pTM=0.448 ipTM=0.494 tol=8.63
2024-07-27 08:02:32,246 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.4 pTM=0.449 ipTM=0.468 tol=5.25
2024-07-27 08:02:58,486 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.4 pTM=0.446 ipTM=0.525 tol=4.53
2024-07-27 08:03:24,697 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.2 pTM=0.447 ipTM=0.494 tol=3.5
2024-07-27 08:03:50,940 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.5 pTM=0.449 ipTM=0.545 tol=4.55
2024-07-27 08:04:17,255 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.3 pTM=0.449 ipTM=0.495 tol=4.53
2024-07-27 08:04:43,694 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.4 pTM=0.448 ipTM=0.554 tol=3.07
2024-07-27 08:05:10,126 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.2 pTM=0.448 ipTM=0.448 tol=6.92
2024-07-27 08:05:36,520 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.3 pTM=0.448 ipTM=0.541 tol=7.47
2024-07-27 08:06:02,879 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.2 pTM=0.449 ipTM=0.434 tol=7.4
2024-07-27 08:06:29,203 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.1 pTM=0.446 ipTM=0.526 tol=6.35
2024-07-27 08:06:55,512 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.1 pTM=0.445 ipTM=0.427 tol=9.05
2024-07-27 08:07:21,799 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.3 pTM=0.446 ipTM=0.534 tol=8.92
2024-07-27 08:07:48,065 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.2 pTM=0.447 ipTM=0.429 tol=7.52
2024-07-27 08:08:14,339 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.5 pTM=0.45 ipTM=0.545 tol=4.57
2024-07-27 08:08:40,588 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.2 pTM=0.446 ipTM=0.413 tol=4.83
2024-07-27 08:09:06,840 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.2 pTM=0.448 ipTM=0.456 tol=8.63
2024-07-27 08:09:33,080 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.45 ipTM=0.427 tol=5.33
2024-07-27 08:09:59,324 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.2 pTM=0.452 ipTM=0.514 tol=3.11
2024-07-27 08:10:25,567 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.1 pTM=0.454 ipTM=0.413 tol=2.83
2024-07-27 08:10:51,814 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.2 pTM=0.456 ipTM=0.479 tol=2.79
2024-07-27 08:10:51,814 alphafold2_multimer_v3_model_5_seed_000 took 814.4s (30 recycles)
2024-07-27 08:10:52,670 reranking models by 'multimer' metric
2024-07-27 08:10:54,116 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 08:12:33,446 Relaxation took 100.8s
2024-07-27 08:12:33,446 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.1 pTM=0.513 ipTM=0.742
2024-07-27 08:14:25,424 Relaxation took 112.0s
2024-07-27 08:14:25,424 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.5 pTM=0.508 ipTM=0.668
2024-07-27 08:17:14,731 Relaxation took 169.3s
2024-07-27 08:17:14,731 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.2 pTM=0.456 ipTM=0.479
2024-07-27 08:19:06,923 Relaxation took 112.2s
2024-07-27 08:19:06,923 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.3 pTM=0.475 ipTM=0.463
2024-07-27 08:21:20,296 Relaxation took 133.4s
2024-07-27 08:21:20,296 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.5 pTM=0.448 ipTM=0.358
2024-07-27 08:21:22,644 Done