2024-07-27 07:55:54,689 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 07:55:54,993 Running on GPU 2024-07-27 07:55:58,313 Found 6 citations for tools or databases 2024-07-27 07:55:58,313 Query 1/1: PTTG1_KLHL36 (length 818) 2024-07-27 07:55:58,812 Sleeping for 8s. Reason: PENDING 2024-07-27 07:56:07,253 Sleeping for 5s. Reason: RUNNING 2024-07-27 07:56:12,661 Sleeping for 8s. Reason: RUNNING 2024-07-27 07:56:21,064 Sleeping for 10s. Reason: RUNNING 2024-07-27 07:56:31,506 Sleeping for 8s. Reason: RUNNING 2024-07-27 07:56:39,926 Sleeping for 7s. Reason: RUNNING 2024-07-27 07:56:47,343 Sleeping for 6s. Reason: RUNNING 2024-07-27 07:56:53,768 Sleeping for 5s. Reason: RUNNING 2024-07-27 07:56:59,184 Sleeping for 8s. Reason: RUNNING 2024-07-27 07:57:07,606 Sleeping for 5s. Reason: RUNNING 2024-07-27 07:57:13,007 Sleeping for 7s. Reason: RUNNING 2024-07-27 07:57:20,423 Sleeping for 7s. Reason: RUNNING 2024-07-27 07:57:27,855 Sleeping for 10s. Reason: RUNNING 2024-07-27 07:57:39,908 Sleeping for 10s. Reason: PENDING 2024-07-27 07:57:50,349 Sleeping for 5s. Reason: RUNNING 2024-07-27 07:57:55,771 Sleeping for 7s. Reason: RUNNING 2024-07-27 07:58:03,198 Sleeping for 8s. Reason: RUNNING 2024-07-27 07:58:11,611 Sleeping for 5s. Reason: RUNNING 2024-07-27 07:58:17,059 Sleeping for 5s. Reason: RUNNING 2024-07-27 07:58:22,499 Sleeping for 9s. Reason: RUNNING 2024-07-27 07:58:31,937 Sleeping for 9s. Reason: RUNNING 2024-07-27 07:58:41,370 Sleeping for 7s. Reason: RUNNING 2024-07-27 07:58:51,295 Setting max_seq=508, max_extra_seq=2048 2024-07-27 08:01:55,746 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.9 pTM=0.669 ipTM=0.126 2024-07-27 08:02:09,616 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.8 pTM=0.677 ipTM=0.136 tol=6.73 2024-07-27 08:02:23,487 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.9 pTM=0.674 ipTM=0.12 tol=11.2 2024-07-27 08:02:37,360 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.6 pTM=0.669 ipTM=0.118 tol=5.55 2024-07-27 08:02:51,237 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.4 pTM=0.669 ipTM=0.128 tol=5.24 2024-07-27 08:03:05,146 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.5 pTM=0.676 ipTM=0.135 tol=7.54 2024-07-27 08:03:19,072 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.8 pTM=0.682 ipTM=0.143 tol=3.64 2024-07-27 08:03:32,997 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.6 pTM=0.682 ipTM=0.149 tol=3.12 2024-07-27 08:03:46,913 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.4 pTM=0.681 ipTM=0.148 tol=2.95 2024-07-27 08:04:00,857 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.8 pTM=0.685 ipTM=0.149 tol=1.57 2024-07-27 08:04:14,794 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.5 pTM=0.682 ipTM=0.149 tol=2.69 2024-07-27 08:04:28,758 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.8 pTM=0.685 ipTM=0.15 tol=1.63 2024-07-27 08:04:42,721 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.9 pTM=0.685 ipTM=0.155 tol=1.88 2024-07-27 08:04:56,690 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.8 pTM=0.683 ipTM=0.149 tol=1.33 2024-07-27 08:05:10,666 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.9 pTM=0.686 ipTM=0.175 tol=2.79 2024-07-27 08:05:24,635 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.9 pTM=0.685 ipTM=0.185 tol=3.62 2024-07-27 08:05:38,604 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.7 pTM=0.685 ipTM=0.179 tol=2.3 2024-07-27 08:05:52,568 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.6 pTM=0.685 ipTM=0.216 tol=3.46 2024-07-27 08:06:06,561 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.9 pTM=0.69 ipTM=0.263 tol=3.2 2024-07-27 08:06:20,548 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.8 pTM=0.688 ipTM=0.215 tol=2.14 2024-07-27 08:06:34,508 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.5 pTM=0.685 ipTM=0.255 tol=1.64 2024-07-27 08:06:48,499 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.9 pTM=0.687 ipTM=0.17 tol=3.07 2024-07-27 08:07:02,451 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.6 pTM=0.684 ipTM=0.158 tol=2.07 2024-07-27 08:07:16,440 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73 pTM=0.689 ipTM=0.248 tol=2.09 2024-07-27 08:07:30,410 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.8 pTM=0.687 ipTM=0.205 tol=1.2 2024-07-27 08:07:44,374 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.8 pTM=0.687 ipTM=0.285 tol=1.4 2024-07-27 08:07:58,372 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.1 pTM=0.69 ipTM=0.229 tol=1.12 2024-07-27 08:08:12,348 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.6 pTM=0.687 ipTM=0.213 tol=1.58 2024-07-27 08:08:26,345 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.9 pTM=0.69 ipTM=0.222 tol=1.11 2024-07-27 08:08:40,343 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.9 pTM=0.691 ipTM=0.28 tol=1.01 2024-07-27 08:08:54,326 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.9 pTM=0.688 ipTM=0.189 tol=1.03 2024-07-27 08:08:54,326 alphafold2_multimer_v3_model_1_seed_000 took 597.9s (30 recycles) 2024-07-27 08:09:08,776 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.8 pTM=0.673 ipTM=0.131 2024-07-27 08:09:22,811 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.6 pTM=0.687 ipTM=0.158 tol=17.7 2024-07-27 08:09:36,861 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.1 pTM=0.69 ipTM=0.21 tol=5.63 2024-07-27 08:09:50,900 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.1 pTM=0.682 ipTM=0.193 tol=7.1 2024-07-27 08:10:04,916 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.8 pTM=0.683 ipTM=0.201 tol=4.38 2024-07-27 08:10:18,967 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.9 pTM=0.684 ipTM=0.206 tol=2.04 2024-07-27 08:10:33,005 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.9 pTM=0.683 ipTM=0.201 tol=4.7 2024-07-27 08:10:47,038 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.8 pTM=0.685 ipTM=0.205 tol=6.02 2024-07-27 08:11:01,065 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.8 pTM=0.685 ipTM=0.204 tol=5.99 2024-07-27 08:11:15,103 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.9 pTM=0.686 ipTM=0.204 tol=5.77 2024-07-27 08:11:29,126 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.7 pTM=0.688 ipTM=0.199 tol=6.93 2024-07-27 08:11:43,155 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.9 pTM=0.691 ipTM=0.199 tol=5.08 2024-07-27 08:11:57,169 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.9 pTM=0.69 ipTM=0.198 tol=2.36 2024-07-27 08:12:11,190 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.8 pTM=0.69 ipTM=0.206 tol=1.61 2024-07-27 08:12:25,208 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.8 pTM=0.689 ipTM=0.204 tol=1.25 2024-07-27 08:12:39,239 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.7 pTM=0.69 ipTM=0.198 tol=1.31 2024-07-27 08:12:53,263 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.9 pTM=0.69 ipTM=0.207 tol=1.01 2024-07-27 08:13:07,282 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.7 pTM=0.69 ipTM=0.211 tol=1.12 2024-07-27 08:13:21,326 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.8 pTM=0.693 ipTM=0.206 tol=1.71 2024-07-27 08:13:35,348 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.6 pTM=0.69 ipTM=0.205 tol=2.21 2024-07-27 08:13:49,367 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.7 pTM=0.688 ipTM=0.207 tol=1.18 2024-07-27 08:14:03,392 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.6 pTM=0.689 ipTM=0.21 tol=0.862 2024-07-27 08:14:17,415 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.7 pTM=0.689 ipTM=0.202 tol=0.853 2024-07-27 08:14:31,449 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.9 pTM=0.692 ipTM=0.21 tol=1.28 2024-07-27 08:14:45,476 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.7 pTM=0.69 ipTM=0.203 tol=1.09 2024-07-27 08:14:59,480 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.6 pTM=0.69 ipTM=0.208 tol=1.35 2024-07-27 08:15:13,497 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.8 pTM=0.692 ipTM=0.204 tol=0.77 2024-07-27 08:15:27,507 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.8 pTM=0.69 ipTM=0.21 tol=1.4 2024-07-27 08:15:41,525 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.6 pTM=0.689 ipTM=0.203 tol=1.17 2024-07-27 08:15:55,538 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.7 pTM=0.69 ipTM=0.203 tol=1.39 2024-07-27 08:16:09,549 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.6 pTM=0.69 ipTM=0.205 tol=1.61 2024-07-27 08:16:09,550 alphafold2_multimer_v3_model_2_seed_000 took 434.8s (30 recycles) 2024-07-27 08:16:24,022 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.4 pTM=0.674 ipTM=0.132 2024-07-27 08:16:38,111 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.8 pTM=0.684 ipTM=0.142 tol=21 2024-07-27 08:16:52,184 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.1 pTM=0.683 ipTM=0.139 tol=8.66 2024-07-27 08:17:06,227 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.8 pTM=0.679 ipTM=0.179 tol=13.8 2024-07-27 08:17:20,255 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.1 pTM=0.686 ipTM=0.194 tol=8 2024-07-27 08:17:34,287 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.9 pTM=0.684 ipTM=0.188 tol=5.36 2024-07-27 08:17:48,324 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.3 pTM=0.685 ipTM=0.194 tol=5.97 2024-07-27 08:18:02,382 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.2 pTM=0.685 ipTM=0.183 tol=4.52 2024-07-27 08:18:16,416 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.1 pTM=0.687 ipTM=0.2 tol=3.62 2024-07-27 08:18:30,438 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.2 pTM=0.683 ipTM=0.184 tol=4.54 2024-07-27 08:18:44,472 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.1 pTM=0.683 ipTM=0.176 tol=1.64 2024-07-27 08:18:58,510 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.1 pTM=0.684 ipTM=0.187 tol=1.92 2024-07-27 08:19:12,516 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.6 pTM=0.682 ipTM=0.19 tol=4.97 2024-07-27 08:19:26,551 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.2 pTM=0.684 ipTM=0.186 tol=9.83 2024-07-27 08:19:40,581 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.4 pTM=0.684 ipTM=0.178 tol=6.46 2024-07-27 08:19:54,629 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.3 pTM=0.684 ipTM=0.186 tol=2.54 2024-07-27 08:20:08,679 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.4 pTM=0.685 ipTM=0.186 tol=3.72 2024-07-27 08:20:22,704 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.2 pTM=0.682 ipTM=0.186 tol=5.91 2024-07-27 08:20:36,746 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.4 pTM=0.684 ipTM=0.183 tol=1.62 2024-07-27 08:20:50,742 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73 pTM=0.682 ipTM=0.186 tol=7.16 2024-07-27 08:21:04,739 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.1 pTM=0.68 ipTM=0.189 tol=6.55 2024-07-27 08:21:18,747 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.2 pTM=0.681 ipTM=0.184 tol=1.39 2024-07-27 08:21:32,789 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.5 pTM=0.684 ipTM=0.174 tol=2.85 2024-07-27 08:21:46,816 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.6 pTM=0.684 ipTM=0.171 tol=3.01 2024-07-27 08:22:00,843 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.6 pTM=0.686 ipTM=0.187 tol=3 2024-07-27 08:22:14,844 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.2 pTM=0.68 ipTM=0.176 tol=1.46 2024-07-27 08:22:28,880 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.6 pTM=0.685 ipTM=0.188 tol=1.34 2024-07-27 08:22:42,884 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.2 pTM=0.682 ipTM=0.177 tol=2.52 2024-07-27 08:22:56,900 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.5 pTM=0.683 ipTM=0.189 tol=2.81 2024-07-27 08:23:10,904 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.3 pTM=0.684 ipTM=0.179 tol=5.74 2024-07-27 08:23:24,903 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.1 pTM=0.681 ipTM=0.187 tol=2.87 2024-07-27 08:23:24,904 alphafold2_multimer_v3_model_3_seed_000 took 434.9s (30 recycles) 2024-07-27 08:23:39,377 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.4 pTM=0.682 ipTM=0.129 2024-07-27 08:23:53,492 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.4 pTM=0.691 ipTM=0.121 tol=12.5 2024-07-27 08:24:07,593 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.6 pTM=0.691 ipTM=0.179 tol=10.6 2024-07-27 08:24:21,639 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.5 pTM=0.693 ipTM=0.217 tol=5.52 2024-07-27 08:24:35,687 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.5 pTM=0.697 ipTM=0.203 tol=2.46 2024-07-27 08:24:49,739 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.6 pTM=0.696 ipTM=0.2 tol=2.11 2024-07-27 08:25:03,794 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.5 pTM=0.696 ipTM=0.169 tol=2.96 2024-07-27 08:25:17,837 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.4 pTM=0.696 ipTM=0.165 tol=1.57 2024-07-27 08:25:31,883 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.6 pTM=0.697 ipTM=0.174 tol=2.51 2024-07-27 08:25:45,952 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.7 pTM=0.699 ipTM=0.171 tol=1.79 2024-07-27 08:26:00,005 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.4 pTM=0.694 ipTM=0.158 tol=1.85 2024-07-27 08:26:14,072 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.4 pTM=0.697 ipTM=0.159 tol=3.81 2024-07-27 08:26:28,136 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.3 pTM=0.694 ipTM=0.147 tol=3.29 2024-07-27 08:26:42,206 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.4 pTM=0.694 ipTM=0.145 tol=3.96 2024-07-27 08:26:56,278 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.1 pTM=0.694 ipTM=0.145 tol=5.89 2024-07-27 08:27:10,342 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.3 pTM=0.694 ipTM=0.146 tol=2.18 2024-07-27 08:27:24,415 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.3 pTM=0.694 ipTM=0.147 tol=3.28 2024-07-27 08:27:38,485 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.2 pTM=0.695 ipTM=0.151 tol=2.92 2024-07-27 08:27:52,566 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.4 pTM=0.695 ipTM=0.146 tol=2.74 2024-07-27 08:28:06,630 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.2 pTM=0.692 ipTM=0.147 tol=3.31 2024-07-27 08:28:20,688 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.9 pTM=0.693 ipTM=0.145 tol=3.88 2024-07-27 08:28:34,772 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.2 pTM=0.694 ipTM=0.148 tol=7.01 2024-07-27 08:28:48,844 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.3 pTM=0.696 ipTM=0.155 tol=7.18 2024-07-27 08:29:02,907 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.4 pTM=0.697 ipTM=0.159 tol=2.63 2024-07-27 08:29:16,972 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.2 pTM=0.696 ipTM=0.159 tol=1.58 2024-07-27 08:29:31,030 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.2 pTM=0.694 ipTM=0.157 tol=1.07 2024-07-27 08:29:45,108 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.4 pTM=0.697 ipTM=0.157 tol=1.88 2024-07-27 08:29:59,169 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73 pTM=0.695 ipTM=0.155 tol=2.5 2024-07-27 08:30:13,232 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.2 pTM=0.695 ipTM=0.157 tol=1.79 2024-07-27 08:30:27,320 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.2 pTM=0.695 ipTM=0.152 tol=2.24 2024-07-27 08:30:41,391 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.1 pTM=0.694 ipTM=0.153 tol=2.16 2024-07-27 08:30:41,391 alphafold2_multimer_v3_model_4_seed_000 took 436.1s (30 recycles) 2024-07-27 08:30:55,890 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.2 pTM=0.68 ipTM=0.127 2024-07-27 08:31:09,992 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.7 pTM=0.689 ipTM=0.135 tol=10.8 2024-07-27 08:31:24,090 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.9 pTM=0.694 ipTM=0.14 tol=5.42 2024-07-27 08:31:38,180 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.9 pTM=0.693 ipTM=0.157 tol=2.2 2024-07-27 08:31:52,263 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.9 pTM=0.692 ipTM=0.136 tol=1.59 2024-07-27 08:32:06,356 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.9 pTM=0.692 ipTM=0.133 tol=2.25 2024-07-27 08:32:20,450 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.9 pTM=0.693 ipTM=0.14 tol=1.77 2024-07-27 08:32:34,549 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.9 pTM=0.691 ipTM=0.136 tol=1.94 2024-07-27 08:32:48,640 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.9 pTM=0.691 ipTM=0.127 tol=3.04 2024-07-27 08:33:02,749 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.9 pTM=0.691 ipTM=0.125 tol=2.91 2024-07-27 08:33:16,843 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.8 pTM=0.69 ipTM=0.124 tol=1.88 2024-07-27 08:33:30,947 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.8 pTM=0.69 ipTM=0.12 tol=2.83 2024-07-27 08:33:45,046 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.8 pTM=0.689 ipTM=0.123 tol=5.89 2024-07-27 08:33:59,159 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.8 pTM=0.692 ipTM=0.144 tol=8.71 2024-07-27 08:34:13,257 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74 pTM=0.697 ipTM=0.166 tol=5.99 2024-07-27 08:34:27,369 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.9 pTM=0.698 ipTM=0.164 tol=1.57 2024-07-27 08:34:41,470 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.2 pTM=0.7 ipTM=0.18 tol=2.64 2024-07-27 08:34:55,547 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.9 pTM=0.696 ipTM=0.166 tol=1.85 2024-07-27 08:35:09,641 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.9 pTM=0.698 ipTM=0.158 tol=1.32 2024-07-27 08:35:23,743 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74 pTM=0.697 ipTM=0.163 tol=2.6 2024-07-27 08:35:37,826 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.9 pTM=0.695 ipTM=0.157 tol=2.56 2024-07-27 08:35:51,919 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.8 pTM=0.695 ipTM=0.152 tol=2.84 2024-07-27 08:36:06,010 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.9 pTM=0.696 ipTM=0.149 tol=1.36 2024-07-27 08:36:20,127 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.9 pTM=0.696 ipTM=0.153 tol=2.79 2024-07-27 08:36:34,250 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74 pTM=0.698 ipTM=0.181 tol=2.66 2024-07-27 08:36:48,361 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.9 pTM=0.695 ipTM=0.144 tol=2.48 2024-07-27 08:37:02,489 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74 pTM=0.697 ipTM=0.147 tol=2.72 2024-07-27 08:37:16,594 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.9 pTM=0.696 ipTM=0.174 tol=2.13 2024-07-27 08:37:30,696 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.8 pTM=0.695 ipTM=0.157 tol=1.61 2024-07-27 08:37:44,799 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.9 pTM=0.695 ipTM=0.165 tol=1.27 2024-07-27 08:37:58,906 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.8 pTM=0.695 ipTM=0.164 tol=2.41 2024-07-27 08:37:58,906 alphafold2_multimer_v3_model_5_seed_000 took 437.1s (30 recycles) 2024-07-27 08:37:59,322 reranking models by 'multimer' metric 2024-07-27 08:38:03,058 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 08:39:14,684 Relaxation took 75.4s 2024-07-27 08:39:14,684 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.6 pTM=0.69 ipTM=0.205 2024-07-27 08:40:11,692 Relaxation took 57.0s 2024-07-27 08:40:11,692 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.9 pTM=0.688 ipTM=0.189 2024-07-27 08:41:22,833 Relaxation took 71.1s 2024-07-27 08:41:22,833 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.1 pTM=0.681 ipTM=0.187 2024-07-27 08:42:15,049 Relaxation took 52.2s 2024-07-27 08:42:15,049 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.8 pTM=0.695 ipTM=0.164 2024-07-27 08:43:29,574 Relaxation took 74.5s 2024-07-27 08:43:29,574 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.1 pTM=0.694 ipTM=0.153 2024-07-27 08:43:31,067 Done