2024-07-27 08:07:28,442 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 08:07:28,784 Running on GPU 2024-07-27 08:07:31,825 Found 6 citations for tools or databases 2024-07-27 08:07:31,825 Query 1/1: PTTG1_KLHL7 (length 788) 2024-07-27 08:07:32,310 Sleeping for 7s. Reason: PENDING 2024-07-27 08:07:39,726 Sleeping for 9s. Reason: PENDING 2024-07-27 08:07:49,158 Sleeping for 5s. Reason: RUNNING 2024-07-27 08:07:54,611 Sleeping for 8s. Reason: RUNNING 2024-07-27 08:08:03,059 Sleeping for 10s. Reason: RUNNING 2024-07-27 08:08:13,504 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:08:20,921 Sleeping for 10s. Reason: RUNNING 2024-07-27 08:08:31,355 Sleeping for 5s. Reason: RUNNING 2024-07-27 08:08:36,812 Sleeping for 5s. Reason: RUNNING 2024-07-27 08:08:42,239 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:08:49,667 Sleeping for 5s. Reason: RUNNING 2024-07-27 08:08:55,100 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:09:02,534 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:09:09,974 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:09:16,413 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:09:22,864 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:09:29,294 Sleeping for 9s. Reason: RUNNING 2024-07-27 08:09:38,709 Sleeping for 10s. Reason: RUNNING 2024-07-27 08:09:49,133 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:09:55,541 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:10:01,964 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:10:08,394 Sleeping for 10s. Reason: RUNNING 2024-07-27 08:10:18,833 Sleeping for 8s. Reason: RUNNING 2024-07-27 08:10:29,039 Sleeping for 8s. Reason: PENDING 2024-07-27 08:10:37,483 Sleeping for 9s. Reason: RUNNING 2024-07-27 08:10:46,917 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:10:54,364 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:11:01,790 Sleeping for 5s. Reason: RUNNING 2024-07-27 08:11:07,248 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:11:14,696 Sleeping for 6s. Reason: RUNNING 2024-07-27 08:11:21,121 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:11:28,530 Sleeping for 9s. Reason: RUNNING 2024-07-27 08:11:37,953 Sleeping for 7s. Reason: RUNNING 2024-07-27 08:11:45,388 Sleeping for 10s. Reason: RUNNING 2024-07-27 08:11:58,455 Setting max_seq=508, max_extra_seq=2048 2024-07-27 08:14:38,702 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.9 pTM=0.524 ipTM=0.192 2024-07-27 08:14:51,383 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.9 pTM=0.535 ipTM=0.189 tol=4.7 2024-07-27 08:15:04,071 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.9 pTM=0.539 ipTM=0.2 tol=3.65 2024-07-27 08:15:16,758 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.9 pTM=0.516 ipTM=0.195 tol=2.12 2024-07-27 08:15:29,504 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.2 pTM=0.523 ipTM=0.192 tol=1.8 2024-07-27 08:15:42,247 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.2 pTM=0.525 ipTM=0.191 tol=1.07 2024-07-27 08:15:55,016 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.3 pTM=0.529 ipTM=0.186 tol=0.991 2024-07-27 08:16:07,791 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.4 pTM=0.512 ipTM=0.183 tol=1.07 2024-07-27 08:16:20,575 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.7 pTM=0.524 ipTM=0.184 tol=1.51 2024-07-27 08:16:33,389 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.6 pTM=0.519 ipTM=0.181 tol=0.996 2024-07-27 08:16:46,189 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.4 pTM=0.519 ipTM=0.183 tol=1.02 2024-07-27 08:16:58,937 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.3 pTM=0.51 ipTM=0.18 tol=1.35 2024-07-27 08:17:11,687 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.2 pTM=0.513 ipTM=0.181 tol=1.06 2024-07-27 08:17:24,449 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.5 pTM=0.51 ipTM=0.184 tol=1.59 2024-07-27 08:17:37,208 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.2 pTM=0.511 ipTM=0.183 tol=1.16 2024-07-27 08:17:49,979 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.2 pTM=0.508 ipTM=0.181 tol=0.764 2024-07-27 08:18:02,767 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.1 pTM=0.502 ipTM=0.181 tol=0.8 2024-07-27 08:18:15,548 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70 pTM=0.506 ipTM=0.179 tol=0.962 2024-07-27 08:18:28,320 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.5 pTM=0.514 ipTM=0.179 tol=1.47 2024-07-27 08:18:41,087 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.2 pTM=0.514 ipTM=0.179 tol=1 2024-07-27 08:18:53,861 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.2 pTM=0.52 ipTM=0.18 tol=0.837 2024-07-27 08:19:06,641 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.1 pTM=0.503 ipTM=0.177 tol=1.28 2024-07-27 08:19:19,467 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.1 pTM=0.509 ipTM=0.177 tol=1.12 2024-07-27 08:19:32,310 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.2 pTM=0.505 ipTM=0.175 tol=1.08 2024-07-27 08:19:45,166 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.1 pTM=0.512 ipTM=0.179 tol=0.801 2024-07-27 08:19:58,022 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.2 pTM=0.504 ipTM=0.18 tol=0.823 2024-07-27 08:20:10,878 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.2 pTM=0.507 ipTM=0.18 tol=0.629 2024-07-27 08:20:23,732 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.3 pTM=0.507 ipTM=0.179 tol=0.551 2024-07-27 08:20:36,574 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70 pTM=0.508 ipTM=0.182 tol=0.682 2024-07-27 08:20:49,437 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70 pTM=0.501 ipTM=0.18 tol=0.741 2024-07-27 08:21:02,304 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.8 pTM=0.498 ipTM=0.179 tol=1.09 2024-07-27 08:21:02,305 alphafold2_multimer_v3_model_1_seed_000 took 539.0s (30 recycles) 2024-07-27 08:21:15,638 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.1 pTM=0.586 ipTM=0.177 2024-07-27 08:21:28,560 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.7 pTM=0.584 ipTM=0.186 tol=4.61 2024-07-27 08:21:41,489 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.4 pTM=0.591 ipTM=0.215 tol=3.13 2024-07-27 08:21:54,414 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.3 pTM=0.572 ipTM=0.173 tol=1.89 2024-07-27 08:22:07,318 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.6 pTM=0.582 ipTM=0.176 tol=1.6 2024-07-27 08:22:20,250 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.8 pTM=0.585 ipTM=0.17 tol=1.22 2024-07-27 08:22:33,171 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.8 pTM=0.587 ipTM=0.178 tol=2.18 2024-07-27 08:22:46,104 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.4 pTM=0.568 ipTM=0.171 tol=1.7 2024-07-27 08:22:59,022 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.5 pTM=0.572 ipTM=0.176 tol=2.13 2024-07-27 08:23:11,923 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=72.6 pTM=0.567 ipTM=0.173 tol=0.685 2024-07-27 08:23:24,870 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.7 pTM=0.577 ipTM=0.182 tol=0.808 2024-07-27 08:23:37,786 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.4 pTM=0.562 ipTM=0.173 tol=0.852 2024-07-27 08:23:50,686 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.4 pTM=0.568 ipTM=0.184 tol=0.772 2024-07-27 08:24:03,601 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.6 pTM=0.567 ipTM=0.179 tol=0.99 2024-07-27 08:24:16,524 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.6 pTM=0.575 ipTM=0.194 tol=1.4 2024-07-27 08:24:29,440 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.4 pTM=0.559 ipTM=0.181 tol=1.05 2024-07-27 08:24:42,363 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.5 pTM=0.563 ipTM=0.188 tol=0.775 2024-07-27 08:24:55,254 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.3 pTM=0.562 ipTM=0.182 tol=0.781 2024-07-27 08:25:08,166 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.7 pTM=0.581 ipTM=0.208 tol=1.63 2024-07-27 08:25:21,069 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.4 pTM=0.568 ipTM=0.188 tol=1.27 2024-07-27 08:25:34,002 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.6 pTM=0.578 ipTM=0.214 tol=1.2 2024-07-27 08:25:46,925 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.4 pTM=0.56 ipTM=0.191 tol=0.929 2024-07-27 08:25:59,839 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.5 pTM=0.573 ipTM=0.2 tol=0.584 2024-07-27 08:26:12,749 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.557 ipTM=0.185 tol=0.865 2024-07-27 08:26:25,670 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.4 pTM=0.577 ipTM=0.204 tol=0.777 2024-07-27 08:26:38,565 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.3 pTM=0.56 ipTM=0.19 tol=1.1 2024-07-27 08:26:51,494 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.5 pTM=0.573 ipTM=0.201 tol=0.769 2024-07-27 08:27:04,421 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.4 pTM=0.568 ipTM=0.185 tol=0.639 2024-07-27 08:27:17,351 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.4 pTM=0.58 ipTM=0.187 tol=0.669 2024-07-27 08:27:30,252 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.3 pTM=0.564 ipTM=0.177 tol=1.06 2024-07-27 08:27:43,166 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.2 pTM=0.571 ipTM=0.179 tol=0.919 2024-07-27 08:27:43,166 alphafold2_multimer_v3_model_2_seed_000 took 400.5s (30 recycles) 2024-07-27 08:27:56,539 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.4 pTM=0.585 ipTM=0.18 2024-07-27 08:28:09,486 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.6 pTM=0.58 ipTM=0.16 tol=9.38 2024-07-27 08:28:22,442 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71 pTM=0.572 ipTM=0.169 tol=5.81 2024-07-27 08:28:35,411 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.561 ipTM=0.151 tol=3.76 2024-07-27 08:28:48,342 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.1 pTM=0.566 ipTM=0.159 tol=2.63 2024-07-27 08:29:01,292 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.1 pTM=0.568 ipTM=0.159 tol=2.81 2024-07-27 08:29:14,229 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.1 pTM=0.563 ipTM=0.164 tol=2.45 2024-07-27 08:29:27,161 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.8 pTM=0.562 ipTM=0.16 tol=2.76 2024-07-27 08:29:40,110 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.1 pTM=0.562 ipTM=0.162 tol=3.48 2024-07-27 08:29:53,057 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.9 pTM=0.562 ipTM=0.159 tol=3.74 2024-07-27 08:30:05,987 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.9 pTM=0.566 ipTM=0.164 tol=2.16 2024-07-27 08:30:18,935 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.8 pTM=0.562 ipTM=0.159 tol=3.05 2024-07-27 08:30:31,861 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.8 pTM=0.563 ipTM=0.158 tol=2.17 2024-07-27 08:30:44,792 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.8 pTM=0.561 ipTM=0.161 tol=3.83 2024-07-27 08:30:57,723 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71 pTM=0.562 ipTM=0.162 tol=2.47 2024-07-27 08:31:10,674 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.8 pTM=0.561 ipTM=0.159 tol=2.22 2024-07-27 08:31:23,591 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.7 pTM=0.554 ipTM=0.156 tol=4.46 2024-07-27 08:31:36,517 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.4 pTM=0.558 ipTM=0.168 tol=3.61 2024-07-27 08:31:49,441 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.6 pTM=0.556 ipTM=0.152 tol=3.11 2024-07-27 08:32:02,353 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.6 pTM=0.558 ipTM=0.163 tol=3.79 2024-07-27 08:32:15,301 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.3 pTM=0.548 ipTM=0.153 tol=3.79 2024-07-27 08:32:28,228 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.4 pTM=0.555 ipTM=0.168 tol=1.98 2024-07-27 08:32:41,151 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.8 pTM=0.566 ipTM=0.157 tol=2.99 2024-07-27 08:32:54,110 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.6 pTM=0.564 ipTM=0.172 tol=3.24 2024-07-27 08:33:07,045 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.4 pTM=0.563 ipTM=0.155 tol=3.46 2024-07-27 08:33:19,986 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.6 pTM=0.569 ipTM=0.165 tol=4.15 2024-07-27 08:33:32,923 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.6 pTM=0.562 ipTM=0.158 tol=2.55 2024-07-27 08:33:45,847 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.5 pTM=0.563 ipTM=0.168 tol=1.74 2024-07-27 08:33:58,786 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.7 pTM=0.565 ipTM=0.157 tol=2.6 2024-07-27 08:34:11,692 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.4 pTM=0.556 ipTM=0.169 tol=3.11 2024-07-27 08:34:24,572 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.5 pTM=0.555 ipTM=0.161 tol=2.72 2024-07-27 08:34:24,573 alphafold2_multimer_v3_model_3_seed_000 took 401.0s (30 recycles) 2024-07-27 08:34:37,878 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.9 pTM=0.585 ipTM=0.21 2024-07-27 08:34:50,833 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.4 pTM=0.573 ipTM=0.16 tol=9.83 2024-07-27 08:35:03,794 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.9 pTM=0.597 ipTM=0.241 tol=5.73 2024-07-27 08:35:16,755 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.4 pTM=0.566 ipTM=0.163 tol=3.82 2024-07-27 08:35:29,741 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.5 pTM=0.551 ipTM=0.19 tol=3.26 2024-07-27 08:35:42,720 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.2 pTM=0.556 ipTM=0.164 tol=3.57 2024-07-27 08:35:55,699 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.1 pTM=0.536 ipTM=0.203 tol=3.59 2024-07-27 08:36:08,650 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.8 pTM=0.524 ipTM=0.161 tol=4.7 2024-07-27 08:36:21,614 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.1 pTM=0.519 ipTM=0.168 tol=3.61 2024-07-27 08:36:34,572 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.7 pTM=0.51 ipTM=0.165 tol=2.78 2024-07-27 08:36:47,548 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.4 pTM=0.5 ipTM=0.175 tol=1.71 2024-07-27 08:37:00,493 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.5 pTM=0.494 ipTM=0.169 tol=3.28 2024-07-27 08:37:13,462 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.9 pTM=0.507 ipTM=0.191 tol=1.36 2024-07-27 08:37:26,437 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.2 pTM=0.49 ipTM=0.172 tol=1.71 2024-07-27 08:37:39,405 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.8 pTM=0.504 ipTM=0.186 tol=2.78 2024-07-27 08:37:52,363 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.5 pTM=0.494 ipTM=0.167 tol=2.43 2024-07-27 08:38:05,341 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.6 pTM=0.491 ipTM=0.182 tol=2.79 2024-07-27 08:38:18,300 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.3 pTM=0.5 ipTM=0.169 tol=1.86 2024-07-27 08:38:31,275 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.9 pTM=0.493 ipTM=0.182 tol=2.34 2024-07-27 08:38:44,234 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.4 pTM=0.488 ipTM=0.17 tol=2.62 2024-07-27 08:38:57,175 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.9 pTM=0.51 ipTM=0.179 tol=1.45 2024-07-27 08:39:10,138 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.6 pTM=0.507 ipTM=0.173 tol=3.72 2024-07-27 08:39:23,085 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.1 pTM=0.512 ipTM=0.186 tol=2.14 2024-07-27 08:39:36,047 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.4 pTM=0.493 ipTM=0.17 tol=2.49 2024-07-27 08:39:49,026 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.9 pTM=0.503 ipTM=0.186 tol=2.46 2024-07-27 08:40:01,976 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.6 pTM=0.498 ipTM=0.172 tol=2.67 2024-07-27 08:40:14,942 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.7 pTM=0.496 ipTM=0.185 tol=2.1 2024-07-27 08:40:27,897 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.8 pTM=0.5 ipTM=0.171 tol=1.71 2024-07-27 08:40:40,859 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.9 pTM=0.494 ipTM=0.176 tol=2.69 2024-07-27 08:40:53,835 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.2 pTM=0.479 ipTM=0.163 tol=2.88 2024-07-27 08:41:06,781 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.5 pTM=0.488 ipTM=0.174 tol=2.21 2024-07-27 08:41:06,782 alphafold2_multimer_v3_model_4_seed_000 took 401.8s (30 recycles) 2024-07-27 08:41:20,116 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.7 pTM=0.579 ipTM=0.165 2024-07-27 08:41:33,092 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.2 pTM=0.575 ipTM=0.151 tol=3.59 2024-07-27 08:41:46,073 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.6 pTM=0.588 ipTM=0.171 tol=2.35 2024-07-27 08:41:59,046 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.6 pTM=0.579 ipTM=0.209 tol=3.17 2024-07-27 08:42:12,032 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.7 pTM=0.583 ipTM=0.144 tol=3.13 2024-07-27 08:42:25,012 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.6 pTM=0.581 ipTM=0.14 tol=2.74 2024-07-27 08:42:37,972 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.6 pTM=0.574 ipTM=0.14 tol=2.84 2024-07-27 08:42:50,957 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.5 pTM=0.573 ipTM=0.142 tol=2.01 2024-07-27 08:43:03,953 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.5 pTM=0.569 ipTM=0.143 tol=1.78 2024-07-27 08:43:16,938 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.8 pTM=0.572 ipTM=0.135 tol=1.71 2024-07-27 08:43:29,893 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.3 pTM=0.562 ipTM=0.136 tol=0.812 2024-07-27 08:43:42,870 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.4 pTM=0.56 ipTM=0.136 tol=1.15 2024-07-27 08:43:55,824 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.2 pTM=0.556 ipTM=0.136 tol=1.18 2024-07-27 08:44:08,782 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.3 pTM=0.552 ipTM=0.141 tol=1.15 2024-07-27 08:44:21,762 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.4 pTM=0.556 ipTM=0.133 tol=1.66 2024-07-27 08:44:34,734 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.4 pTM=0.554 ipTM=0.131 tol=1.47 2024-07-27 08:44:47,741 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.4 pTM=0.548 ipTM=0.135 tol=1.36 2024-07-27 08:45:00,654 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.9 pTM=0.545 ipTM=0.135 tol=1.5 2024-07-27 08:45:13,620 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.1 pTM=0.542 ipTM=0.135 tol=0.895 2024-07-27 08:45:26,590 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.1 pTM=0.546 ipTM=0.135 tol=0.825 2024-07-27 08:45:39,561 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.1 pTM=0.543 ipTM=0.133 tol=0.879 2024-07-27 08:45:52,508 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.2 pTM=0.55 ipTM=0.135 tol=1.15 2024-07-27 08:46:05,495 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.4 pTM=0.558 ipTM=0.136 tol=1.25 2024-07-27 08:46:18,439 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.4 pTM=0.553 ipTM=0.137 tol=1.32 2024-07-27 08:46:31,408 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.1 pTM=0.548 ipTM=0.132 tol=1.13 2024-07-27 08:46:44,344 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.2 pTM=0.554 ipTM=0.134 tol=1.11 2024-07-27 08:46:57,285 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.1 pTM=0.543 ipTM=0.176 tol=1.89 2024-07-27 08:47:10,251 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.1 pTM=0.55 ipTM=0.154 tol=1.84 2024-07-27 08:47:23,208 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.2 pTM=0.552 ipTM=0.147 tol=1.4 2024-07-27 08:47:36,135 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71 pTM=0.543 ipTM=0.136 tol=0.951 2024-07-27 08:47:49,073 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.9 pTM=0.544 ipTM=0.137 tol=0.989 2024-07-27 08:47:49,073 alphafold2_multimer_v3_model_5_seed_000 took 401.9s (30 recycles) 2024-07-27 08:47:49,468 reranking models by 'multimer' metric 2024-07-27 08:47:52,518 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 08:49:04,559 Relaxation took 75.1s 2024-07-27 08:49:04,560 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.2 pTM=0.571 ipTM=0.179 2024-07-27 08:49:59,522 Relaxation took 55.0s 2024-07-27 08:49:59,522 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.8 pTM=0.498 ipTM=0.179 2024-07-27 08:51:02,627 Relaxation took 63.1s 2024-07-27 08:51:02,627 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.5 pTM=0.555 ipTM=0.161 2024-07-27 08:52:09,373 Relaxation took 66.7s 2024-07-27 08:52:09,373 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.5 pTM=0.488 ipTM=0.174 2024-07-27 08:52:54,270 Relaxation took 44.9s 2024-07-27 08:52:54,270 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.9 pTM=0.544 ipTM=0.137 2024-07-27 08:52:55,692 Done