2024-07-27 08:24:19,563 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 08:24:19,939 Running on GPU
2024-07-27 08:24:22,716 Found 6 citations for tools or databases
2024-07-27 08:24:22,716 Query 1/1: RARA_KBTBD8 (length 1063)
2024-07-27 08:24:23,144 Sleeping for 5s. Reason: PENDING
2024-07-27 08:24:28,553 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:24:36,977 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:24:46,414 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:24:54,869 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:25:01,283 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:25:08,692 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:25:16,110 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:25:24,564 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:25:33,987 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:25:41,416 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:25:48,826 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:25:56,245 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:26:01,649 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:26:08,058 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:26:15,493 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:26:25,927 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:26:31,343 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:26:39,824 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:26:46,254 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:26:51,687 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:27:00,989 Sleeping for 9s. Reason: PENDING
2024-07-27 08:27:10,436 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:27:19,853 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:27:30,300 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:27:35,743 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:27:45,177 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:27:53,593 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:28:02,016 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:28:12,434 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:28:22,868 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:28:30,288 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:28:38,705 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:28:45,123 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:28:59,593 Setting max_seq=508, max_extra_seq=2048
2024-07-27 08:33:06,128 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.1 pTM=0.549 ipTM=0.216
2024-07-27 08:33:35,612 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.6 pTM=0.546 ipTM=0.215 tol=6.69
2024-07-27 08:34:05,177 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.1 pTM=0.541 ipTM=0.231 tol=8.14
2024-07-27 08:34:34,829 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.6 pTM=0.539 ipTM=0.226 tol=3.57
2024-07-27 08:35:04,523 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.6 pTM=0.541 ipTM=0.237 tol=2.76
2024-07-27 08:35:34,232 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.9 pTM=0.543 ipTM=0.243 tol=1.54
2024-07-27 08:36:03,945 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.4 pTM=0.546 ipTM=0.258 tol=1.95
2024-07-27 08:36:33,653 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.1 pTM=0.538 ipTM=0.242 tol=1.66
2024-07-27 08:37:03,387 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.2 pTM=0.544 ipTM=0.251 tol=1.33
2024-07-27 08:37:33,122 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.2 pTM=0.54 ipTM=0.242 tol=1.55
2024-07-27 08:38:02,833 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.1 pTM=0.543 ipTM=0.264 tol=1.35
2024-07-27 08:38:32,555 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.8 pTM=0.534 ipTM=0.243 tol=1.91
2024-07-27 08:39:02,276 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74 pTM=0.539 ipTM=0.25 tol=2.05
2024-07-27 08:39:32,001 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.8 pTM=0.539 ipTM=0.251 tol=2.16
2024-07-27 08:40:01,739 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.9 pTM=0.537 ipTM=0.248 tol=1.9
2024-07-27 08:40:31,501 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74 pTM=0.535 ipTM=0.249 tol=1.35
2024-07-27 08:41:01,227 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.9 pTM=0.534 ipTM=0.25 tol=2.21
2024-07-27 08:41:30,978 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.9 pTM=0.533 ipTM=0.252 tol=2.72
2024-07-27 08:42:00,720 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.9 pTM=0.533 ipTM=0.255 tol=2.31
2024-07-27 08:42:30,465 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.1 pTM=0.536 ipTM=0.267 tol=2.31
2024-07-27 08:43:00,214 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.9 pTM=0.535 ipTM=0.261 tol=2.52
2024-07-27 08:43:29,962 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.1 pTM=0.535 ipTM=0.265 tol=2.08
2024-07-27 08:43:59,726 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.2 pTM=0.537 ipTM=0.259 tol=1.96
2024-07-27 08:44:29,459 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.8 pTM=0.529 ipTM=0.253 tol=1.96
2024-07-27 08:44:59,185 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.8 pTM=0.529 ipTM=0.252 tol=2.02
2024-07-27 08:45:28,912 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.8 pTM=0.53 ipTM=0.261 tol=2.3
2024-07-27 08:45:58,640 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.8 pTM=0.533 ipTM=0.251 tol=2.16
2024-07-27 08:46:28,384 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.1 pTM=0.531 ipTM=0.261 tol=2.08
2024-07-27 08:46:58,133 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74 pTM=0.536 ipTM=0.262 tol=2.13
2024-07-27 08:47:27,891 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.2 pTM=0.532 ipTM=0.257 tol=2.15
2024-07-27 08:47:57,621 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.7 pTM=0.528 ipTM=0.25 tol=1.75
2024-07-27 08:47:57,622 alphafold2_multimer_v3_model_1_seed_000 took 1132.4s (30 recycles)
2024-07-27 08:48:28,289 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.8 pTM=0.556 ipTM=0.244
2024-07-27 08:48:58,172 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.9 pTM=0.552 ipTM=0.214 tol=15.4
2024-07-27 08:49:28,051 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.1 pTM=0.545 ipTM=0.232 tol=5.52
2024-07-27 08:49:57,912 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.5 pTM=0.549 ipTM=0.227 tol=7.02
2024-07-27 08:50:27,790 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.4 pTM=0.549 ipTM=0.236 tol=4.84
2024-07-27 08:50:57,625 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.4 pTM=0.548 ipTM=0.234 tol=2.83
2024-07-27 08:51:27,461 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.9 pTM=0.55 ipTM=0.23 tol=2.28
2024-07-27 08:51:57,313 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.8 pTM=0.551 ipTM=0.234 tol=3.73
2024-07-27 08:52:27,149 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.9 pTM=0.549 ipTM=0.225 tol=3.66
2024-07-27 08:52:56,980 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.8 pTM=0.547 ipTM=0.223 tol=3.35
2024-07-27 08:53:26,800 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.6 pTM=0.543 ipTM=0.219 tol=3.11
2024-07-27 08:53:56,633 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.6 pTM=0.548 ipTM=0.227 tol=4.11
2024-07-27 08:54:26,466 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.8 pTM=0.546 ipTM=0.219 tol=2.23
2024-07-27 08:54:56,314 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.8 pTM=0.553 ipTM=0.23 tol=2.72
2024-07-27 08:55:26,171 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.8 pTM=0.547 ipTM=0.217 tol=1.72
2024-07-27 08:55:56,015 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.6 pTM=0.548 ipTM=0.224 tol=2.67
2024-07-27 08:56:25,882 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.8 pTM=0.545 ipTM=0.213 tol=3.16
2024-07-27 08:56:55,712 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.8 pTM=0.546 ipTM=0.222 tol=3.69
2024-07-27 08:57:25,538 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.6 pTM=0.544 ipTM=0.215 tol=2.97
2024-07-27 08:57:55,396 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.2 pTM=0.553 ipTM=0.224 tol=3.21
2024-07-27 08:58:25,233 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.2 pTM=0.547 ipTM=0.212 tol=2.45
2024-07-27 08:58:55,073 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.2 pTM=0.545 ipTM=0.208 tol=3.58
2024-07-27 08:59:24,930 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.4 pTM=0.547 ipTM=0.21 tol=1.87
2024-07-27 08:59:54,779 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.4 pTM=0.547 ipTM=0.208 tol=2.62
2024-07-27 09:00:24,634 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.4 pTM=0.546 ipTM=0.205 tol=3.07
2024-07-27 09:00:54,485 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.3 pTM=0.542 ipTM=0.204 tol=4.02
2024-07-27 09:01:24,317 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.5 pTM=0.547 ipTM=0.208 tol=3.49
2024-07-27 09:01:54,147 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.2 pTM=0.545 ipTM=0.209 tol=2.68
2024-07-27 09:02:23,971 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.2 pTM=0.544 ipTM=0.206 tol=3.05
2024-07-27 09:02:53,806 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.4 pTM=0.546 ipTM=0.21 tol=2.35
2024-07-27 09:03:23,646 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.2 pTM=0.542 ipTM=0.205 tol=2.46
2024-07-27 09:03:23,647 alphafold2_multimer_v3_model_2_seed_000 took 925.1s (30 recycles)
2024-07-27 09:03:54,328 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.4 pTM=0.516 ipTM=0.209
2024-07-27 09:04:24,139 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.3 pTM=0.556 ipTM=0.222 tol=10.2
2024-07-27 09:04:53,994 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.8 pTM=0.545 ipTM=0.208 tol=8.56
2024-07-27 09:05:23,908 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.8 pTM=0.538 ipTM=0.198 tol=11.7
2024-07-27 09:05:53,791 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.5 pTM=0.533 ipTM=0.199 tol=5.36
2024-07-27 09:06:23,672 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.4 pTM=0.539 ipTM=0.202 tol=4.64
2024-07-27 09:06:53,536 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.6 pTM=0.537 ipTM=0.203 tol=3.11
2024-07-27 09:07:23,402 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.2 pTM=0.536 ipTM=0.198 tol=4.45
2024-07-27 09:07:53,257 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.7 pTM=0.537 ipTM=0.202 tol=3.78
2024-07-27 09:08:23,139 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.4 pTM=0.536 ipTM=0.196 tol=7.58
2024-07-27 09:08:53,001 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.4 pTM=0.536 ipTM=0.196 tol=4.21
2024-07-27 09:09:22,878 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.4 pTM=0.535 ipTM=0.194 tol=4.42
2024-07-27 09:09:52,761 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.8 pTM=0.538 ipTM=0.197 tol=6.11
2024-07-27 09:10:22,621 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.8 pTM=0.536 ipTM=0.199 tol=3.3
2024-07-27 09:10:52,495 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.1 pTM=0.541 ipTM=0.2 tol=3.66
2024-07-27 09:11:22,350 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.1 pTM=0.54 ipTM=0.202 tol=3.86
2024-07-27 09:11:52,188 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.2 pTM=0.54 ipTM=0.203 tol=4.39
2024-07-27 09:12:22,040 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.4 pTM=0.54 ipTM=0.208 tol=6.28
2024-07-27 09:12:51,856 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.4 pTM=0.543 ipTM=0.22 tol=5.66
2024-07-27 09:13:21,676 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.3 pTM=0.559 ipTM=0.264 tol=5.16
2024-07-27 09:13:51,494 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.4 pTM=0.548 ipTM=0.241 tol=5.67
2024-07-27 09:14:21,307 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74 pTM=0.559 ipTM=0.271 tol=2.99
2024-07-27 09:14:51,132 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.1 pTM=0.57 ipTM=0.316 tol=3.41
2024-07-27 09:15:20,945 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.6 pTM=0.569 ipTM=0.315 tol=1.57
2024-07-27 09:15:50,769 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.5 pTM=0.551 ipTM=0.249 tol=1.64
2024-07-27 09:16:20,580 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.1 pTM=0.567 ipTM=0.29 tol=1.55
2024-07-27 09:16:50,403 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.7 pTM=0.556 ipTM=0.277 tol=1.4
2024-07-27 09:17:20,218 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.2 pTM=0.571 ipTM=0.316 tol=1.11
2024-07-27 09:17:50,040 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.6 pTM=0.556 ipTM=0.278 tol=1.36
2024-07-27 09:18:19,856 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.4 pTM=0.575 ipTM=0.317 tol=1.31
2024-07-27 09:18:49,676 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.6 pTM=0.558 ipTM=0.287 tol=1.46
2024-07-27 09:18:49,677 alphafold2_multimer_v3_model_3_seed_000 took 925.2s (30 recycles)
2024-07-27 09:19:20,342 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.6 pTM=0.549 ipTM=0.224
2024-07-27 09:19:50,161 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.1 pTM=0.545 ipTM=0.208 tol=9.05
2024-07-27 09:20:19,947 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.7 pTM=0.568 ipTM=0.293 tol=7.41
2024-07-27 09:20:49,746 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.4 pTM=0.56 ipTM=0.246 tol=3.62
2024-07-27 09:21:19,573 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.9 pTM=0.547 ipTM=0.209 tol=12.4
2024-07-27 09:21:49,424 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.8 pTM=0.544 ipTM=0.203 tol=9.33
2024-07-27 09:22:19,250 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.6 pTM=0.542 ipTM=0.21 tol=3.97
2024-07-27 09:22:49,089 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.8 pTM=0.54 ipTM=0.202 tol=3.18
2024-07-27 09:23:18,944 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.8 pTM=0.544 ipTM=0.21 tol=3.3
2024-07-27 09:23:48,781 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.8 pTM=0.54 ipTM=0.203 tol=3.23
2024-07-27 09:24:18,600 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.6 pTM=0.542 ipTM=0.212 tol=2.15
2024-07-27 09:24:48,438 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.8 pTM=0.542 ipTM=0.206 tol=3.3
2024-07-27 09:25:18,275 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.8 pTM=0.543 ipTM=0.208 tol=4.05
2024-07-27 09:25:48,117 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73 pTM=0.544 ipTM=0.208 tol=2
2024-07-27 09:26:17,977 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.1 pTM=0.55 ipTM=0.21 tol=4.69
2024-07-27 09:26:47,826 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.9 pTM=0.542 ipTM=0.204 tol=2.03
2024-07-27 09:27:17,654 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.6 pTM=0.542 ipTM=0.209 tol=2.67
2024-07-27 09:27:47,494 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.7 pTM=0.54 ipTM=0.204 tol=2.03
2024-07-27 09:28:17,335 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.9 pTM=0.547 ipTM=0.211 tol=2.29
2024-07-27 09:28:47,181 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73 pTM=0.542 ipTM=0.208 tol=1.79
2024-07-27 09:29:17,010 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.5 pTM=0.543 ipTM=0.209 tol=3.32
2024-07-27 09:29:46,850 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.9 pTM=0.542 ipTM=0.207 tol=3.41
2024-07-27 09:30:16,701 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.8 pTM=0.544 ipTM=0.209 tol=1.94
2024-07-27 09:30:46,560 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73 pTM=0.543 ipTM=0.206 tol=3.91
2024-07-27 09:31:16,392 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.9 pTM=0.542 ipTM=0.208 tol=4.13
2024-07-27 09:31:46,230 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.9 pTM=0.541 ipTM=0.208 tol=5.07
2024-07-27 09:32:16,057 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.7 pTM=0.54 ipTM=0.209 tol=4.22
2024-07-27 09:32:45,919 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73 pTM=0.539 ipTM=0.209 tol=2.62
2024-07-27 09:33:15,760 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.4 pTM=0.54 ipTM=0.211 tol=2.91
2024-07-27 09:33:45,622 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.9 pTM=0.538 ipTM=0.206 tol=3.26
2024-07-27 09:34:15,462 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.6 pTM=0.535 ipTM=0.209 tol=2.07
2024-07-27 09:34:15,462 alphafold2_multimer_v3_model_4_seed_000 took 924.9s (30 recycles)
2024-07-27 09:34:46,177 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.7 pTM=0.553 ipTM=0.227
2024-07-27 09:35:16,031 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.1 pTM=0.563 ipTM=0.217 tol=9.21
2024-07-27 09:35:45,909 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.2 pTM=0.555 ipTM=0.216 tol=5.25
2024-07-27 09:36:15,790 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.2 pTM=0.557 ipTM=0.212 tol=5.61
2024-07-27 09:36:45,678 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.3 pTM=0.553 ipTM=0.214 tol=3.61
2024-07-27 09:37:15,569 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.4 pTM=0.556 ipTM=0.212 tol=6.32
2024-07-27 09:37:45,451 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.5 pTM=0.555 ipTM=0.212 tol=2.66
2024-07-27 09:38:15,329 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.2 pTM=0.552 ipTM=0.21 tol=2.28
2024-07-27 09:38:45,197 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.5 pTM=0.554 ipTM=0.212 tol=2.46
2024-07-27 09:39:15,066 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.4 pTM=0.555 ipTM=0.212 tol=1.46
2024-07-27 09:39:44,926 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.4 pTM=0.553 ipTM=0.213 tol=1.1
2024-07-27 09:40:14,788 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.4 pTM=0.555 ipTM=0.214 tol=0.921
2024-07-27 09:40:44,648 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.6 pTM=0.554 ipTM=0.215 tol=1.13
2024-07-27 09:41:14,501 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.2 pTM=0.551 ipTM=0.212 tol=1.65
2024-07-27 09:41:44,387 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.6 pTM=0.556 ipTM=0.213 tol=1.8
2024-07-27 09:42:14,255 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.4 pTM=0.553 ipTM=0.213 tol=0.868
2024-07-27 09:42:44,111 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.3 pTM=0.552 ipTM=0.214 tol=0.622
2024-07-27 09:43:13,960 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.2 pTM=0.55 ipTM=0.214 tol=0.972
2024-07-27 09:43:43,826 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.2 pTM=0.55 ipTM=0.213 tol=0.569
2024-07-27 09:44:13,695 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.4 pTM=0.552 ipTM=0.213 tol=1.46
2024-07-27 09:44:43,564 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.4 pTM=0.553 ipTM=0.214 tol=0.843
2024-07-27 09:45:13,427 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.3 pTM=0.553 ipTM=0.212 tol=1.25
2024-07-27 09:45:43,310 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.5 pTM=0.555 ipTM=0.213 tol=1.07
2024-07-27 09:46:13,201 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.4 pTM=0.554 ipTM=0.211 tol=1.21
2024-07-27 09:46:43,099 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.3 pTM=0.55 ipTM=0.21 tol=1.03
2024-07-27 09:47:12,981 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.4 pTM=0.554 ipTM=0.21 tol=1.17
2024-07-27 09:47:42,862 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.3 pTM=0.55 ipTM=0.212 tol=1.13
2024-07-27 09:48:12,755 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.1 pTM=0.55 ipTM=0.212 tol=1.38
2024-07-27 09:48:42,643 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.2 pTM=0.549 ipTM=0.214 tol=1.67
2024-07-27 09:49:12,569 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.6 pTM=0.556 ipTM=0.214 tol=2.13
2024-07-27 09:49:42,449 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.3 pTM=0.55 ipTM=0.212 tol=1.33
2024-07-27 09:49:42,450 alphafold2_multimer_v3_model_5_seed_000 took 926.1s (30 recycles)
2024-07-27 09:49:43,326 reranking models by 'multimer' metric
2024-07-27 09:49:44,505 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 09:51:29,695 Relaxation took 106.4s
2024-07-27 09:51:29,695 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.6 pTM=0.558 ipTM=0.287
2024-07-27 09:53:11,927 Relaxation took 102.2s
2024-07-27 09:53:11,927 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.7 pTM=0.528 ipTM=0.25
2024-07-27 09:55:21,501 Relaxation took 129.6s
2024-07-27 09:55:21,501 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.3 pTM=0.55 ipTM=0.212
2024-07-27 09:57:53,850 Relaxation took 152.3s
2024-07-27 09:57:53,851 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.6 pTM=0.535 ipTM=0.209
2024-07-27 09:59:54,469 Relaxation took 120.6s
2024-07-27 09:59:54,469 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.2 pTM=0.542 ipTM=0.205
2024-07-27 09:59:56,789 Done