2024-07-27 08:30:20,972 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 08:30:21,279 Running on GPU
2024-07-27 08:30:24,858 Found 6 citations for tools or databases
2024-07-27 08:30:24,858 Query 1/1: RARA_KLHL36 (length 1078)
2024-07-27 08:30:25,383 Sleeping for 10s. Reason: PENDING
2024-07-27 08:30:35,775 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:30:41,192 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:30:46,605 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:30:54,043 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:31:02,459 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:31:10,886 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:31:16,304 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:31:25,750 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:31:35,183 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:31:40,606 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:31:47,054 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:31:55,503 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:32:05,939 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:32:16,363 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:32:23,721 Sleeping for 6s. Reason: PENDING
2024-07-27 08:32:30,153 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:32:40,583 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:32:47,999 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:32:58,435 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:33:08,851 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:33:16,262 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:33:25,701 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:33:31,118 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:33:41,533 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:33:50,950 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:34:05,571 Setting max_seq=508, max_extra_seq=2048
2024-07-27 08:37:19,465 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74 pTM=0.542 ipTM=0.162
2024-07-27 08:37:45,117 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.2 pTM=0.568 ipTM=0.445 tol=17.3
2024-07-27 08:38:10,814 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.8 pTM=0.575 ipTM=0.463 tol=6.95
2024-07-27 08:38:36,533 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.8 pTM=0.567 ipTM=0.436 tol=5.12
2024-07-27 08:39:02,370 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.4 pTM=0.556 ipTM=0.285 tol=2.52
2024-07-27 08:39:28,224 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.2 pTM=0.538 ipTM=0.18 tol=3.58
2024-07-27 08:39:54,113 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.2 pTM=0.542 ipTM=0.216 tol=4.81
2024-07-27 08:40:20,051 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.3 pTM=0.537 ipTM=0.177 tol=2.63
2024-07-27 08:40:45,994 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.2 pTM=0.538 ipTM=0.152 tol=6.93
2024-07-27 08:41:11,965 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.4 pTM=0.544 ipTM=0.148 tol=11
2024-07-27 08:41:37,913 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.7 pTM=0.552 ipTM=0.164 tol=4.49
2024-07-27 08:42:03,860 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.8 pTM=0.549 ipTM=0.166 tol=3.48
2024-07-27 08:42:29,803 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.8 pTM=0.556 ipTM=0.175 tol=2.64
2024-07-27 08:42:55,758 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.8 pTM=0.55 ipTM=0.165 tol=5.32
2024-07-27 08:43:21,738 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.6 pTM=0.551 ipTM=0.166 tol=3.39
2024-07-27 08:43:47,730 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.2 pTM=0.548 ipTM=0.154 tol=3.47
2024-07-27 08:44:13,652 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.6 pTM=0.55 ipTM=0.165 tol=3.22
2024-07-27 08:44:39,549 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.9 pTM=0.547 ipTM=0.157 tol=2.06
2024-07-27 08:45:05,437 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.5 pTM=0.55 ipTM=0.172 tol=1.75
2024-07-27 08:45:31,359 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.1 pTM=0.542 ipTM=0.152 tol=3.75
2024-07-27 08:45:57,265 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.6 pTM=0.55 ipTM=0.165 tol=2.61
2024-07-27 08:46:23,199 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.3 pTM=0.545 ipTM=0.155 tol=2.12
2024-07-27 08:46:49,070 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.4 pTM=0.551 ipTM=0.174 tol=2.73
2024-07-27 08:47:14,995 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.2 pTM=0.55 ipTM=0.167 tol=3.06
2024-07-27 08:47:40,849 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.2 pTM=0.555 ipTM=0.184 tol=2.09
2024-07-27 08:48:06,746 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.9 pTM=0.549 ipTM=0.168 tol=2.2
2024-07-27 08:48:32,636 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.4 pTM=0.556 ipTM=0.183 tol=1.76
2024-07-27 08:48:58,568 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.9 pTM=0.558 ipTM=0.182 tol=1.76
2024-07-27 08:49:24,453 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.5 pTM=0.566 ipTM=0.2 tol=2.47
2024-07-27 08:49:50,329 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.2 pTM=0.562 ipTM=0.231 tol=2.39
2024-07-27 08:50:16,218 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.2 pTM=0.566 ipTM=0.214 tol=1.69
2024-07-27 08:50:16,219 alphafold2_multimer_v3_model_1_seed_000 took 965.9s (30 recycles)
2024-07-27 08:50:42,837 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.7 pTM=0.556 ipTM=0.186
2024-07-27 08:51:08,850 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.4 pTM=0.553 ipTM=0.177 tol=21.8
2024-07-27 08:51:34,914 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.8 pTM=0.55 ipTM=0.157 tol=11.3
2024-07-27 08:52:00,944 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.4 pTM=0.554 ipTM=0.166 tol=8.98
2024-07-27 08:52:26,975 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.5 pTM=0.556 ipTM=0.17 tol=9.78
2024-07-27 08:52:53,007 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=77.1 pTM=0.548 ipTM=0.157 tol=7.71
2024-07-27 08:53:19,054 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77 pTM=0.557 ipTM=0.169 tol=5.46
2024-07-27 08:53:45,087 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.1 pTM=0.549 ipTM=0.16 tol=6.73
2024-07-27 08:54:11,112 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77 pTM=0.55 ipTM=0.162 tol=4.57
2024-07-27 08:54:37,132 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.7 pTM=0.554 ipTM=0.164 tol=10
2024-07-27 08:55:03,184 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.1 pTM=0.552 ipTM=0.161 tol=2.55
2024-07-27 08:55:29,207 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.3 pTM=0.55 ipTM=0.16 tol=6.04
2024-07-27 08:55:55,264 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.3 pTM=0.553 ipTM=0.161 tol=2.37
2024-07-27 08:56:21,270 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.1 pTM=0.55 ipTM=0.162 tol=3.7
2024-07-27 08:56:47,288 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.2 pTM=0.552 ipTM=0.161 tol=3.91
2024-07-27 08:57:13,312 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=77.1 pTM=0.553 ipTM=0.16 tol=5.64
2024-07-27 08:57:39,345 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=77.2 pTM=0.548 ipTM=0.158 tol=1.91
2024-07-27 08:58:05,370 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.1 pTM=0.553 ipTM=0.166 tol=3.34
2024-07-27 08:58:31,389 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=77.1 pTM=0.552 ipTM=0.162 tol=2.78
2024-07-27 08:58:57,430 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.9 pTM=0.553 ipTM=0.162 tol=4.77
2024-07-27 08:59:23,422 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.6 pTM=0.559 ipTM=0.176 tol=5.52
2024-07-27 08:59:49,419 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=77 pTM=0.554 ipTM=0.163 tol=2.66
2024-07-27 09:00:15,435 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=77 pTM=0.551 ipTM=0.16 tol=3.45
2024-07-27 09:00:41,437 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=77.1 pTM=0.551 ipTM=0.16 tol=2.59
2024-07-27 09:01:07,420 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.9 pTM=0.552 ipTM=0.162 tol=3.79
2024-07-27 09:01:33,392 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=77.3 pTM=0.551 ipTM=0.158 tol=4.14
2024-07-27 09:01:59,374 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.4 pTM=0.551 ipTM=0.16 tol=3.36
2024-07-27 09:02:25,414 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77.4 pTM=0.551 ipTM=0.157 tol=2.89
2024-07-27 09:02:51,440 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.2 pTM=0.55 ipTM=0.157 tol=3.06
2024-07-27 09:03:17,471 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.4 pTM=0.554 ipTM=0.161 tol=5.33
2024-07-27 09:03:43,507 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=77.1 pTM=0.553 ipTM=0.156 tol=5.81
2024-07-27 09:03:43,508 alphafold2_multimer_v3_model_2_seed_000 took 806.6s (30 recycles)
2024-07-27 09:04:10,232 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.4 pTM=0.553 ipTM=0.167
2024-07-27 09:04:36,318 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.3 pTM=0.558 ipTM=0.151 tol=22
2024-07-27 09:05:02,379 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.4 pTM=0.557 ipTM=0.16 tol=14.2
2024-07-27 09:05:28,412 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.6 pTM=0.57 ipTM=0.185 tol=29.6
2024-07-27 09:05:54,536 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.4 pTM=0.557 ipTM=0.153 tol=16.8
2024-07-27 09:06:20,647 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.6 pTM=0.556 ipTM=0.156 tol=20.4
2024-07-27 09:06:46,774 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.8 pTM=0.557 ipTM=0.156 tol=10.3
2024-07-27 09:07:12,914 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.6 pTM=0.556 ipTM=0.158 tol=14.4
2024-07-27 09:07:39,107 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76.5 pTM=0.558 ipTM=0.157 tol=6.96
2024-07-27 09:08:05,209 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.2 pTM=0.561 ipTM=0.203 tol=8.92
2024-07-27 09:08:31,372 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.2 pTM=0.559 ipTM=0.163 tol=10.5
2024-07-27 09:08:57,538 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.6 pTM=0.555 ipTM=0.157 tol=8.09
2024-07-27 09:09:23,692 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.5 pTM=0.557 ipTM=0.164 tol=3.74
2024-07-27 09:09:49,837 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.5 pTM=0.556 ipTM=0.16 tol=3.12
2024-07-27 09:10:15,928 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.9 pTM=0.558 ipTM=0.167 tol=20.5
2024-07-27 09:10:41,981 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.1 pTM=0.564 ipTM=0.214 tol=25.3
2024-07-27 09:11:08,088 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76 pTM=0.556 ipTM=0.158 tol=11.7
2024-07-27 09:11:34,196 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.5 pTM=0.555 ipTM=0.157 tol=9.9
2024-07-27 09:12:00,287 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.3 pTM=0.556 ipTM=0.17 tol=10.7
2024-07-27 09:12:26,406 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.5 pTM=0.556 ipTM=0.157 tol=6.95
2024-07-27 09:12:52,492 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.1 pTM=0.556 ipTM=0.159 tol=11.1
2024-07-27 09:13:18,507 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.4 pTM=0.562 ipTM=0.21 tol=15.5
2024-07-27 09:13:44,538 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.6 pTM=0.558 ipTM=0.164 tol=31.3
2024-07-27 09:14:10,521 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.8 pTM=0.559 ipTM=0.207 tol=30.1
2024-07-27 09:14:36,577 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=75.7 pTM=0.556 ipTM=0.169 tol=12.5
2024-07-27 09:15:02,546 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.2 pTM=0.556 ipTM=0.174 tol=11.8
2024-07-27 09:15:28,583 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.1 pTM=0.557 ipTM=0.172 tol=8.72
2024-07-27 09:15:54,554 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.4 pTM=0.56 ipTM=0.204 tol=9.78
2024-07-27 09:16:20,589 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.9 pTM=0.559 ipTM=0.167 tol=24
2024-07-27 09:16:46,584 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.8 pTM=0.562 ipTM=0.21 tol=23.2
2024-07-27 09:17:12,642 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.1 pTM=0.557 ipTM=0.166 tol=10.8
2024-07-27 09:17:12,643 alphafold2_multimer_v3_model_3_seed_000 took 808.4s (30 recycles)
2024-07-27 09:17:39,316 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.6 pTM=0.583 ipTM=0.263
2024-07-27 09:18:05,370 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.4 pTM=0.558 ipTM=0.172 tol=6.26
2024-07-27 09:18:31,493 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75.1 pTM=0.56 ipTM=0.147 tol=12.9
2024-07-27 09:18:57,552 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.1 pTM=0.578 ipTM=0.187 tol=25.2
2024-07-27 09:19:23,581 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75 pTM=0.574 ipTM=0.182 tol=5.14
2024-07-27 09:19:49,626 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.4 pTM=0.578 ipTM=0.188 tol=6.15
2024-07-27 09:20:15,686 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.3 pTM=0.578 ipTM=0.187 tol=5.44
2024-07-27 09:20:41,773 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.3 pTM=0.581 ipTM=0.197 tol=3.53
2024-07-27 09:21:07,849 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.4 pTM=0.582 ipTM=0.196 tol=4.45
2024-07-27 09:21:33,928 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.1 pTM=0.582 ipTM=0.198 tol=4.95
2024-07-27 09:22:00,025 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=75.7 pTM=0.581 ipTM=0.197 tol=3.61
2024-07-27 09:22:26,108 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.3 pTM=0.583 ipTM=0.2 tol=1.96
2024-07-27 09:22:52,163 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.1 pTM=0.583 ipTM=0.203 tol=1.72
2024-07-27 09:23:18,255 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.6 pTM=0.582 ipTM=0.199 tol=1.58
2024-07-27 09:23:44,375 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.4 pTM=0.582 ipTM=0.197 tol=3.16
2024-07-27 09:24:10,463 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.2 pTM=0.583 ipTM=0.202 tol=4.39
2024-07-27 09:24:36,554 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=75.5 pTM=0.583 ipTM=0.2 tol=4.11
2024-07-27 09:25:02,640 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.4 pTM=0.582 ipTM=0.196 tol=2.82
2024-07-27 09:25:28,699 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.4 pTM=0.581 ipTM=0.198 tol=3.58
2024-07-27 09:25:54,744 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.6 pTM=0.583 ipTM=0.205 tol=1.36
2024-07-27 09:26:20,797 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75.3 pTM=0.583 ipTM=0.204 tol=2.09
2024-07-27 09:26:46,862 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.4 pTM=0.583 ipTM=0.202 tol=2.91
2024-07-27 09:27:12,904 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.3 pTM=0.581 ipTM=0.196 tol=2.07
2024-07-27 09:27:38,958 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.5 pTM=0.582 ipTM=0.198 tol=1.34
2024-07-27 09:28:05,009 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.4 pTM=0.583 ipTM=0.202 tol=2.49
2024-07-27 09:28:31,085 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.3 pTM=0.582 ipTM=0.197 tol=2.7
2024-07-27 09:28:57,150 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.2 pTM=0.58 ipTM=0.194 tol=2.48
2024-07-27 09:29:23,214 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75.4 pTM=0.583 ipTM=0.2 tol=2.46
2024-07-27 09:29:49,259 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.1 pTM=0.583 ipTM=0.204 tol=2.31
2024-07-27 09:30:15,341 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=75.4 pTM=0.581 ipTM=0.193 tol=2.06
2024-07-27 09:30:41,380 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.4 pTM=0.582 ipTM=0.197 tol=1.61
2024-07-27 09:30:41,380 alphafold2_multimer_v3_model_4_seed_000 took 808.0s (30 recycles)
2024-07-27 09:31:08,167 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.9 pTM=0.548 ipTM=0.148
2024-07-27 09:31:34,295 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.2 pTM=0.628 ipTM=0.406 tol=28.8
2024-07-27 09:32:00,555 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.2 pTM=0.551 ipTM=0.167 tol=15.9
2024-07-27 09:32:26,674 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.8 pTM=0.574 ipTM=0.2 tol=26.2
2024-07-27 09:32:52,833 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76 pTM=0.56 ipTM=0.174 tol=6.62
2024-07-27 09:33:19,036 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.9 pTM=0.559 ipTM=0.185 tol=18.6
2024-07-27 09:33:45,214 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.4 pTM=0.559 ipTM=0.174 tol=12.9
2024-07-27 09:34:11,397 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.4 pTM=0.559 ipTM=0.186 tol=11.7
2024-07-27 09:34:37,544 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.8 pTM=0.565 ipTM=0.171 tol=18.1
2024-07-27 09:35:03,759 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.6 pTM=0.559 ipTM=0.18 tol=14.9
2024-07-27 09:35:29,955 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.4 pTM=0.56 ipTM=0.184 tol=9.39
2024-07-27 09:35:56,100 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.7 pTM=0.568 ipTM=0.177 tol=22.8
2024-07-27 09:36:22,253 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76 pTM=0.563 ipTM=0.173 tol=4.29
2024-07-27 09:36:48,445 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.5 pTM=0.56 ipTM=0.185 tol=11.9
2024-07-27 09:37:14,666 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.7 pTM=0.559 ipTM=0.184 tol=9.19
2024-07-27 09:37:40,843 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.2 pTM=0.56 ipTM=0.179 tol=13.5
2024-07-27 09:38:07,048 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.6 pTM=0.559 ipTM=0.19 tol=17.2
2024-07-27 09:38:33,198 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.6 pTM=0.564 ipTM=0.175 tol=24.1
2024-07-27 09:38:59,377 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.4 pTM=0.562 ipTM=0.182 tol=10.4
2024-07-27 09:39:25,571 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.8 pTM=0.562 ipTM=0.188 tol=6.21
2024-07-27 09:39:51,756 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.5 pTM=0.559 ipTM=0.177 tol=2.07
2024-07-27 09:40:17,934 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.5 pTM=0.56 ipTM=0.186 tol=4.12
2024-07-27 09:40:44,105 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.5 pTM=0.556 ipTM=0.174 tol=5.92
2024-07-27 09:41:10,234 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.4 pTM=0.559 ipTM=0.184 tol=10.1
2024-07-27 09:41:36,350 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.4 pTM=0.56 ipTM=0.173 tol=6.3
2024-07-27 09:42:02,475 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.4 pTM=0.559 ipTM=0.182 tol=4.73
2024-07-27 09:42:28,659 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.6 pTM=0.558 ipTM=0.177 tol=10.2
2024-07-27 09:42:54,798 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.6 pTM=0.567 ipTM=0.18 tol=22.5
2024-07-27 09:43:21,023 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.2 pTM=0.559 ipTM=0.174 tol=12.7
2024-07-27 09:43:47,224 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.7 pTM=0.56 ipTM=0.191 tol=14
2024-07-27 09:44:13,421 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75.8 pTM=0.563 ipTM=0.162 tol=23.3
2024-07-27 09:44:13,422 alphafold2_multimer_v3_model_5_seed_000 took 811.3s (30 recycles)
2024-07-27 09:44:14,121 reranking models by 'multimer' metric
2024-07-27 09:44:15,227 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 09:47:16,588 Relaxation took 182.5s
2024-07-27 09:47:16,588 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.2 pTM=0.566 ipTM=0.214
2024-07-27 09:49:52,954 Relaxation took 156.4s
2024-07-27 09:49:52,954 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.4 pTM=0.582 ipTM=0.197
2024-07-27 09:51:50,596 Relaxation took 117.6s
2024-07-27 09:51:50,597 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.1 pTM=0.557 ipTM=0.166
2024-07-27 09:53:50,670 Relaxation took 120.1s
2024-07-27 09:53:50,670 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.8 pTM=0.563 ipTM=0.162
2024-07-27 09:55:39,176 Relaxation took 108.5s
2024-07-27 09:55:39,176 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.1 pTM=0.553 ipTM=0.156
2024-07-27 09:55:41,253 Done