2024-07-27 08:30:20,972 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 08:30:21,291 Running on GPU
2024-07-27 08:30:24,857 Found 6 citations for tools or databases
2024-07-27 08:30:24,858 Query 1/1: RARA_RNF7 (length 575)
2024-07-27 08:30:25,351 Sleeping for 7s. Reason: PENDING
2024-07-27 08:30:32,784 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:30:39,215 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:30:44,621 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:30:53,039 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:31:00,461 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:31:07,879 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:31:16,319 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:31:23,749 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:31:32,965 Sleeping for 9s. Reason: PENDING
2024-07-27 08:31:42,381 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:31:52,802 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:31:58,232 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:32:04,660 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:32:12,078 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:32:22,341 Setting max_seq=508, max_extra_seq=2048
2024-07-27 08:35:32,687 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.8 pTM=0.459 ipTM=0.141
2024-07-27 08:35:39,510 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.7 pTM=0.463 ipTM=0.129 tol=11.3
2024-07-27 08:35:46,354 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.5 pTM=0.466 ipTM=0.13 tol=5.11
2024-07-27 08:35:53,213 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.4 pTM=0.476 ipTM=0.179 tol=6.62
2024-07-27 08:36:00,065 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.8 pTM=0.482 ipTM=0.215 tol=3.68
2024-07-27 08:36:06,934 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.9 pTM=0.482 ipTM=0.212 tol=4.22
2024-07-27 08:36:13,805 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.7 pTM=0.482 ipTM=0.21 tol=3.44
2024-07-27 08:36:20,687 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.8 pTM=0.482 ipTM=0.203 tol=4.65
2024-07-27 08:36:27,563 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.4 pTM=0.479 ipTM=0.193 tol=4.3
2024-07-27 08:36:34,441 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.5 pTM=0.477 ipTM=0.183 tol=4.61
2024-07-27 08:36:41,327 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.6 pTM=0.476 ipTM=0.181 tol=3.73
2024-07-27 08:36:48,189 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62 pTM=0.477 ipTM=0.183 tol=2.55
2024-07-27 08:36:55,074 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.5 pTM=0.479 ipTM=0.197 tol=2.17
2024-07-27 08:37:01,969 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.5 pTM=0.48 ipTM=0.202 tol=1.35
2024-07-27 08:37:08,877 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.8 pTM=0.483 ipTM=0.21 tol=2.17
2024-07-27 08:37:15,766 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.6 pTM=0.48 ipTM=0.202 tol=1.66
2024-07-27 08:37:22,670 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63 pTM=0.484 ipTM=0.216 tol=1.45
2024-07-27 08:37:29,581 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63 pTM=0.482 ipTM=0.204 tol=1.94
2024-07-27 08:37:36,482 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63 pTM=0.484 ipTM=0.22 tol=1.65
2024-07-27 08:37:43,394 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.4 pTM=0.484 ipTM=0.215 tol=2.12
2024-07-27 08:37:50,317 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.4 pTM=0.487 ipTM=0.232 tol=1.5
2024-07-27 08:37:57,243 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.1 pTM=0.486 ipTM=0.221 tol=1.66
2024-07-27 08:38:04,167 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.9 pTM=0.486 ipTM=0.224 tol=4.22
2024-07-27 08:38:11,080 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63 pTM=0.485 ipTM=0.216 tol=2.58
2024-07-27 08:38:17,990 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63 pTM=0.489 ipTM=0.23 tol=1.69
2024-07-27 08:38:24,904 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.7 pTM=0.488 ipTM=0.229 tol=2.01
2024-07-27 08:38:31,824 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.8 pTM=0.489 ipTM=0.237 tol=2.03
2024-07-27 08:38:38,752 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.7 pTM=0.49 ipTM=0.239 tol=3.1
2024-07-27 08:38:45,682 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.8 pTM=0.493 ipTM=0.25 tol=4.77
2024-07-27 08:38:52,613 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.7 pTM=0.493 ipTM=0.25 tol=4.31
2024-07-27 08:38:59,536 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.8 pTM=0.493 ipTM=0.251 tol=3.83
2024-07-27 08:38:59,536 alphafold2_multimer_v3_model_1_seed_000 took 392.1s (30 recycles)
2024-07-27 08:39:06,642 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.8 pTM=0.479 ipTM=0.208
2024-07-27 08:39:13,563 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.6 pTM=0.489 ipTM=0.229 tol=9.31
2024-07-27 08:39:20,481 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.6 pTM=0.485 ipTM=0.215 tol=4.72
2024-07-27 08:39:27,407 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.1 pTM=0.487 ipTM=0.219 tol=2.67
2024-07-27 08:39:34,353 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.3 pTM=0.485 ipTM=0.213 tol=1.83
2024-07-27 08:39:41,281 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.4 pTM=0.486 ipTM=0.215 tol=1.83
2024-07-27 08:39:48,195 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.2 pTM=0.485 ipTM=0.213 tol=1.84
2024-07-27 08:39:55,146 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.6 pTM=0.487 ipTM=0.219 tol=1.38
2024-07-27 08:40:02,080 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.5 pTM=0.486 ipTM=0.217 tol=1.36
2024-07-27 08:40:09,027 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.3 pTM=0.486 ipTM=0.215 tol=1.76
2024-07-27 08:40:15,970 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.3 pTM=0.485 ipTM=0.216 tol=1.14
2024-07-27 08:40:22,918 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.485 ipTM=0.209 tol=1.49
2024-07-27 08:40:29,860 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.4 pTM=0.486 ipTM=0.211 tol=1.16
2024-07-27 08:40:36,797 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.1 pTM=0.485 ipTM=0.211 tol=0.641
2024-07-27 08:40:43,734 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.3 pTM=0.485 ipTM=0.209 tol=1
2024-07-27 08:40:50,665 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.484 ipTM=0.208 tol=1.52
2024-07-27 08:40:57,620 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.1 pTM=0.485 ipTM=0.21 tol=1.22
2024-07-27 08:41:04,559 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.5 pTM=0.485 ipTM=0.208 tol=0.846
2024-07-27 08:41:11,498 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.5 pTM=0.484 ipTM=0.207 tol=1.6
2024-07-27 08:41:18,451 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.9 pTM=0.484 ipTM=0.207 tol=1.91
2024-07-27 08:41:25,406 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.1 pTM=0.484 ipTM=0.208 tol=1.04
2024-07-27 08:41:32,340 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.6 pTM=0.482 ipTM=0.203 tol=1.63
2024-07-27 08:41:39,298 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.9 pTM=0.485 ipTM=0.21 tol=1.19
2024-07-27 08:41:46,253 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.1 pTM=0.485 ipTM=0.217 tol=1.71
2024-07-27 08:41:53,198 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.8 pTM=0.485 ipTM=0.213 tol=1.28
2024-07-27 08:42:00,150 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.8 pTM=0.485 ipTM=0.211 tol=1.37
2024-07-27 08:42:07,098 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.8 pTM=0.483 ipTM=0.208 tol=1.36
2024-07-27 08:42:14,037 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.486 ipTM=0.216 tol=1.13
2024-07-27 08:42:20,983 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.8 pTM=0.484 ipTM=0.213 tol=0.834
2024-07-27 08:42:27,920 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.6 pTM=0.484 ipTM=0.214 tol=1.04
2024-07-27 08:42:34,873 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.7 pTM=0.486 ipTM=0.215 tol=0.691
2024-07-27 08:42:34,874 alphafold2_multimer_v3_model_2_seed_000 took 215.1s (30 recycles)
2024-07-27 08:42:41,985 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.4 pTM=0.457 ipTM=0.0999
2024-07-27 08:42:48,935 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.8 pTM=0.468 ipTM=0.126 tol=14
2024-07-27 08:42:55,883 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.6 pTM=0.471 ipTM=0.137 tol=8.71
2024-07-27 08:43:02,830 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.7 pTM=0.474 ipTM=0.137 tol=6.51
2024-07-27 08:43:09,776 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.6 pTM=0.471 ipTM=0.13 tol=4.72
2024-07-27 08:43:16,705 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.7 pTM=0.469 ipTM=0.127 tol=3.66
2024-07-27 08:43:23,647 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62 pTM=0.47 ipTM=0.133 tol=3.96
2024-07-27 08:43:30,582 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62 pTM=0.468 ipTM=0.124 tol=2.63
2024-07-27 08:43:37,519 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.8 pTM=0.471 ipTM=0.138 tol=4.43
2024-07-27 08:43:44,457 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.5 pTM=0.473 ipTM=0.146 tol=2.56
2024-07-27 08:43:51,397 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.3 pTM=0.475 ipTM=0.165 tol=2.99
2024-07-27 08:43:58,317 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.2 pTM=0.48 ipTM=0.188 tol=2.34
2024-07-27 08:44:05,268 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.5 pTM=0.477 ipTM=0.161 tol=3.02
2024-07-27 08:44:12,195 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61 pTM=0.486 ipTM=0.219 tol=4.59
2024-07-27 08:44:19,146 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62 pTM=0.495 ipTM=0.231 tol=5.61
2024-07-27 08:44:26,090 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.5 pTM=0.5 ipTM=0.271 tol=2.43
2024-07-27 08:44:33,035 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.1 pTM=0.498 ipTM=0.251 tol=2.69
2024-07-27 08:44:39,964 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.1 pTM=0.503 ipTM=0.278 tol=2.65
2024-07-27 08:44:46,900 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.5 pTM=0.499 ipTM=0.255 tol=3.84
2024-07-27 08:44:53,852 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.3 pTM=0.505 ipTM=0.287 tol=2.1
2024-07-27 08:45:00,786 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.4 pTM=0.5 ipTM=0.261 tol=2.84
2024-07-27 08:45:07,728 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.4 pTM=0.502 ipTM=0.275 tol=2.93
2024-07-27 08:45:14,680 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.3 pTM=0.498 ipTM=0.253 tol=2.49
2024-07-27 08:45:21,631 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.4 pTM=0.505 ipTM=0.291 tol=3.15
2024-07-27 08:45:28,573 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.7 pTM=0.504 ipTM=0.273 tol=3.22
2024-07-27 08:45:35,517 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.3 pTM=0.505 ipTM=0.283 tol=2.36
2024-07-27 08:45:42,454 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60 pTM=0.5 ipTM=0.264 tol=3.9
2024-07-27 08:45:49,396 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.9 pTM=0.505 ipTM=0.286 tol=2.57
2024-07-27 08:45:56,339 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.9 pTM=0.502 ipTM=0.269 tol=2.82
2024-07-27 08:46:03,283 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.9 pTM=0.503 ipTM=0.274 tol=4.1
2024-07-27 08:46:10,238 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.5 pTM=0.502 ipTM=0.276 tol=4.17
2024-07-27 08:46:10,238 alphafold2_multimer_v3_model_3_seed_000 took 215.1s (30 recycles)
2024-07-27 08:46:17,326 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.1 pTM=0.458 ipTM=0.152
2024-07-27 08:46:24,228 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.6 pTM=0.463 ipTM=0.135 tol=15.1
2024-07-27 08:46:31,176 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.8 pTM=0.475 ipTM=0.175 tol=8.77
2024-07-27 08:46:38,120 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.1 pTM=0.478 ipTM=0.183 tol=5.78
2024-07-27 08:46:45,072 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.3 pTM=0.479 ipTM=0.193 tol=4.2
2024-07-27 08:46:52,020 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.4 pTM=0.479 ipTM=0.208 tol=3.54
2024-07-27 08:46:58,974 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.6 pTM=0.479 ipTM=0.212 tol=6.62
2024-07-27 08:47:05,905 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.6 pTM=0.479 ipTM=0.204 tol=10.9
2024-07-27 08:47:12,853 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.1 pTM=0.481 ipTM=0.214 tol=5.57
2024-07-27 08:47:19,797 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.9 pTM=0.483 ipTM=0.218 tol=3.56
2024-07-27 08:47:26,747 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.8 pTM=0.481 ipTM=0.204 tol=5.86
2024-07-27 08:47:33,695 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.7 pTM=0.48 ipTM=0.21 tol=6.11
2024-07-27 08:47:40,646 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.3 pTM=0.483 ipTM=0.22 tol=4.73
2024-07-27 08:47:47,609 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.1 pTM=0.482 ipTM=0.214 tol=5.82
2024-07-27 08:47:54,559 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.3 pTM=0.486 ipTM=0.226 tol=2.96
2024-07-27 08:48:01,518 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.2 pTM=0.482 ipTM=0.211 tol=6.44
2024-07-27 08:48:08,475 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.5 pTM=0.484 ipTM=0.221 tol=7.25
2024-07-27 08:48:15,440 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.2 pTM=0.479 ipTM=0.199 tol=5.44
2024-07-27 08:48:22,401 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.2 pTM=0.481 ipTM=0.206 tol=5.52
2024-07-27 08:48:29,362 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.5 pTM=0.478 ipTM=0.197 tol=4.52
2024-07-27 08:48:36,294 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.2 pTM=0.481 ipTM=0.211 tol=3.73
2024-07-27 08:48:43,248 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.1 pTM=0.48 ipTM=0.204 tol=3.48
2024-07-27 08:48:50,209 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.2 pTM=0.481 ipTM=0.211 tol=3.07
2024-07-27 08:48:57,164 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.2 pTM=0.477 ipTM=0.187 tol=2.01
2024-07-27 08:49:04,127 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.2 pTM=0.481 ipTM=0.202 tol=2
2024-07-27 08:49:11,095 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.1 pTM=0.478 ipTM=0.193 tol=2.92
2024-07-27 08:49:18,055 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.8 pTM=0.479 ipTM=0.209 tol=5.18
2024-07-27 08:49:25,007 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.9 pTM=0.478 ipTM=0.191 tol=5.07
2024-07-27 08:49:31,971 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.2 pTM=0.482 ipTM=0.217 tol=4.07
2024-07-27 08:49:38,935 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.1 pTM=0.477 ipTM=0.196 tol=4.15
2024-07-27 08:49:45,904 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.3 pTM=0.481 ipTM=0.204 tol=3.96
2024-07-27 08:49:45,904 alphafold2_multimer_v3_model_4_seed_000 took 215.4s (30 recycles)
2024-07-27 08:49:53,038 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.8 pTM=0.469 ipTM=0.166
2024-07-27 08:49:59,969 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.3 pTM=0.483 ipTM=0.199 tol=10.9
2024-07-27 08:50:06,908 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.8 pTM=0.489 ipTM=0.232 tol=7.68
2024-07-27 08:50:13,863 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.9 pTM=0.485 ipTM=0.207 tol=6.62
2024-07-27 08:50:20,810 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.6 pTM=0.488 ipTM=0.222 tol=5.38
2024-07-27 08:50:27,770 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.6 pTM=0.489 ipTM=0.231 tol=5.71
2024-07-27 08:50:34,729 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.6 pTM=0.488 ipTM=0.23 tol=5.5
2024-07-27 08:50:41,683 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.488 ipTM=0.218 tol=3.75
2024-07-27 08:50:48,638 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.487 ipTM=0.22 tol=5.41
2024-07-27 08:50:55,606 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.9 pTM=0.487 ipTM=0.214 tol=6.68
2024-07-27 08:51:02,547 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.3 pTM=0.485 ipTM=0.207 tol=6.77
2024-07-27 08:51:09,491 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.7 pTM=0.483 ipTM=0.194 tol=8.21
2024-07-27 08:51:16,444 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.489 ipTM=0.213 tol=6.68
2024-07-27 08:51:23,397 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.8 pTM=0.488 ipTM=0.215 tol=6.19
2024-07-27 08:51:30,327 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.1 pTM=0.491 ipTM=0.226 tol=2.8
2024-07-27 08:51:37,266 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.7 pTM=0.488 ipTM=0.216 tol=4.34
2024-07-27 08:51:44,218 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.8 pTM=0.487 ipTM=0.208 tol=3.7
2024-07-27 08:51:51,158 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.2 pTM=0.493 ipTM=0.234 tol=3.06
2024-07-27 08:51:58,113 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.8 pTM=0.488 ipTM=0.212 tol=4.36
2024-07-27 08:52:05,058 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.9 pTM=0.49 ipTM=0.221 tol=5.1
2024-07-27 08:52:12,008 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.1 pTM=0.49 ipTM=0.226 tol=3.72
2024-07-27 08:52:18,967 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.5 pTM=0.492 ipTM=0.234 tol=3.48
2024-07-27 08:52:25,929 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.4 pTM=0.49 ipTM=0.219 tol=4.6
2024-07-27 08:52:32,877 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.493 ipTM=0.236 tol=5.38
2024-07-27 08:52:39,825 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.7 pTM=0.49 ipTM=0.218 tol=4.88
2024-07-27 08:52:46,777 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.7 pTM=0.491 ipTM=0.225 tol=4.58
2024-07-27 08:52:53,721 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.7 pTM=0.49 ipTM=0.217 tol=2.27
2024-07-27 08:53:00,654 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.7 pTM=0.492 ipTM=0.23 tol=4.45
2024-07-27 08:53:07,614 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.3 pTM=0.49 ipTM=0.214 tol=4.04
2024-07-27 08:53:14,569 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.8 pTM=0.49 ipTM=0.222 tol=3.37
2024-07-27 08:53:21,506 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.7 pTM=0.491 ipTM=0.218 tol=2.84
2024-07-27 08:53:21,507 alphafold2_multimer_v3_model_5_seed_000 took 215.4s (30 recycles)
2024-07-27 08:53:21,726 reranking models by 'multimer' metric
2024-07-27 08:53:24,360 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 08:54:08,440 Relaxation took 46.7s
2024-07-27 08:54:08,440 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.5 pTM=0.502 ipTM=0.276
2024-07-27 08:54:48,812 Relaxation took 40.4s
2024-07-27 08:54:48,812 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.8 pTM=0.493 ipTM=0.251
2024-07-27 08:55:25,260 Relaxation took 36.4s
2024-07-27 08:55:25,260 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.7 pTM=0.491 ipTM=0.218
2024-07-27 08:55:48,215 Relaxation took 23.0s
2024-07-27 08:55:48,215 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.7 pTM=0.486 ipTM=0.215
2024-07-27 08:56:13,422 Relaxation took 25.2s
2024-07-27 08:56:13,422 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.3 pTM=0.481 ipTM=0.204
2024-07-27 08:56:14,506 Done