2024-07-27 08:33:54,056 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 08:33:55,444 Running on GPU
2024-07-27 08:33:59,793 Found 6 citations for tools or databases
2024-07-27 08:33:59,793 Query 1/1: RARA_SOCS3 (length 687)
2024-07-27 08:34:00,279 Sleeping for 10s. Reason: PENDING
2024-07-27 08:34:10,733 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:34:16,162 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:34:23,576 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:34:29,979 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:34:38,468 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:34:46,905 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:34:54,331 Sleeping for 7s. Reason: RUNNING
2024-07-27 08:35:01,760 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:35:10,185 Sleeping for 9s. Reason: RUNNING
2024-07-27 08:35:19,630 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:35:26,050 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:35:36,239 Sleeping for 8s. Reason: PENDING
2024-07-27 08:35:44,665 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:35:55,102 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:36:05,533 Sleeping for 5s. Reason: RUNNING
2024-07-27 08:36:10,940 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:36:19,376 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:36:29,804 Sleeping for 8s. Reason: RUNNING
2024-07-27 08:36:38,237 Sleeping for 6s. Reason: RUNNING
2024-07-27 08:36:44,644 Sleeping for 10s. Reason: RUNNING
2024-07-27 08:36:58,467 Setting max_seq=508, max_extra_seq=2048
2024-07-27 08:41:08,207 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.4 pTM=0.41 ipTM=0.156
2024-07-27 08:41:20,556 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.6 pTM=0.417 ipTM=0.165 tol=9.28
2024-07-27 08:41:32,920 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.1 pTM=0.43 ipTM=0.176 tol=7.36
2024-07-27 08:41:45,316 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.2 pTM=0.443 ipTM=0.21 tol=2.99
2024-07-27 08:41:57,712 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.8 pTM=0.442 ipTM=0.211 tol=4.14
2024-07-27 08:42:10,139 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.2 pTM=0.448 ipTM=0.226 tol=3.48
2024-07-27 08:42:22,573 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.7 pTM=0.446 ipTM=0.216 tol=2.08
2024-07-27 08:42:35,016 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.5 pTM=0.45 ipTM=0.229 tol=2.39
2024-07-27 08:42:47,448 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.1 pTM=0.448 ipTM=0.221 tol=2.35
2024-07-27 08:42:59,895 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.3 pTM=0.45 ipTM=0.23 tol=2.6
2024-07-27 08:43:12,326 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.1 pTM=0.446 ipTM=0.218 tol=4.5
2024-07-27 08:43:24,734 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.7 pTM=0.45 ipTM=0.231 tol=1.77
2024-07-27 08:43:37,187 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.6 pTM=0.445 ipTM=0.214 tol=2.68
2024-07-27 08:43:49,623 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61 pTM=0.448 ipTM=0.226 tol=2.95
2024-07-27 08:44:02,081 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.1 pTM=0.449 ipTM=0.225 tol=2.07
2024-07-27 08:44:14,521 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.5 pTM=0.446 ipTM=0.219 tol=2.08
2024-07-27 08:44:26,962 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.5 pTM=0.45 ipTM=0.227 tol=3.79
2024-07-27 08:44:39,402 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.6 pTM=0.448 ipTM=0.223 tol=3.32
2024-07-27 08:44:51,838 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60 pTM=0.451 ipTM=0.231 tol=2.54
2024-07-27 08:45:04,289 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.4 pTM=0.448 ipTM=0.226 tol=3.25
2024-07-27 08:45:16,726 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.2 pTM=0.45 ipTM=0.237 tol=1.93
2024-07-27 08:45:29,172 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.2 pTM=0.448 ipTM=0.227 tol=2.59
2024-07-27 08:45:41,616 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.6 pTM=0.45 ipTM=0.229 tol=2.63
2024-07-27 08:45:54,058 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.6 pTM=0.447 ipTM=0.219 tol=2.03
2024-07-27 08:46:06,508 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.4 pTM=0.454 ipTM=0.246 tol=2.46
2024-07-27 08:46:18,972 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.6 pTM=0.45 ipTM=0.226 tol=2.1
2024-07-27 08:46:31,417 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.5 pTM=0.451 ipTM=0.235 tol=1.99
2024-07-27 08:46:43,840 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.2 pTM=0.45 ipTM=0.234 tol=2.3
2024-07-27 08:46:56,268 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.1 pTM=0.45 ipTM=0.233 tol=2.07
2024-07-27 08:47:08,699 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.3 pTM=0.453 ipTM=0.238 tol=2.57
2024-07-27 08:47:21,137 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.8 pTM=0.447 ipTM=0.223 tol=2.82
2024-07-27 08:47:21,137 alphafold2_multimer_v3_model_1_seed_000 took 601.6s (30 recycles)
2024-07-27 08:47:34,021 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.7 pTM=0.418 ipTM=0.16
2024-07-27 08:47:46,487 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.4 pTM=0.421 ipTM=0.161 tol=13.5
2024-07-27 08:47:59,002 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.8 pTM=0.421 ipTM=0.138 tol=8.54
2024-07-27 08:48:11,502 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.1 pTM=0.426 ipTM=0.15 tol=3.89
2024-07-27 08:48:24,001 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.8 pTM=0.425 ipTM=0.147 tol=4.48
2024-07-27 08:48:36,492 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.1 pTM=0.435 ipTM=0.172 tol=7.8
2024-07-27 08:48:48,985 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.7 pTM=0.438 ipTM=0.184 tol=7.73
2024-07-27 08:49:01,488 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.6 pTM=0.446 ipTM=0.198 tol=2.17
2024-07-27 08:49:13,968 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.4 pTM=0.447 ipTM=0.206 tol=3.63
2024-07-27 08:49:26,449 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.4 pTM=0.44 ipTM=0.193 tol=3.77
2024-07-27 08:49:38,959 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.8 pTM=0.439 ipTM=0.189 tol=5.17
2024-07-27 08:49:51,450 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.8 pTM=0.441 ipTM=0.194 tol=3.73
2024-07-27 08:50:03,939 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.6 pTM=0.444 ipTM=0.201 tol=7.07
2024-07-27 08:50:16,438 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.8 pTM=0.446 ipTM=0.203 tol=2.92
2024-07-27 08:50:28,930 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.6 pTM=0.439 ipTM=0.188 tol=3.47
2024-07-27 08:50:41,438 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.7 pTM=0.437 ipTM=0.183 tol=3.91
2024-07-27 08:50:53,945 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.4 pTM=0.443 ipTM=0.198 tol=6.04
2024-07-27 08:51:06,457 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.5 pTM=0.449 ipTM=0.216 tol=7.77
2024-07-27 08:51:18,964 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.5 pTM=0.439 ipTM=0.189 tol=7.79
2024-07-27 08:51:31,476 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.8 pTM=0.445 ipTM=0.206 tol=4.01
2024-07-27 08:51:43,966 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.7 pTM=0.444 ipTM=0.203 tol=3.51
2024-07-27 08:51:56,477 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.7 pTM=0.447 ipTM=0.211 tol=2.26
2024-07-27 08:52:08,960 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.6 pTM=0.447 ipTM=0.208 tol=5.3
2024-07-27 08:52:21,439 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.8 pTM=0.446 ipTM=0.204 tol=2.63
2024-07-27 08:52:33,922 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.9 pTM=0.443 ipTM=0.195 tol=1.28
2024-07-27 08:52:46,413 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.6 pTM=0.444 ipTM=0.2 tol=2.28
2024-07-27 08:52:58,893 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.6 pTM=0.443 ipTM=0.196 tol=1.4
2024-07-27 08:53:11,364 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.4 pTM=0.443 ipTM=0.198 tol=1.2
2024-07-27 08:53:23,837 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.4 pTM=0.439 ipTM=0.191 tol=2.11
2024-07-27 08:53:36,331 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.7 pTM=0.446 ipTM=0.201 tol=2.47
2024-07-27 08:53:48,819 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.6 pTM=0.449 ipTM=0.214 tol=2
2024-07-27 08:53:48,820 alphafold2_multimer_v3_model_2_seed_000 took 387.2s (30 recycles)
2024-07-27 08:54:01,714 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.9 pTM=0.431 ipTM=0.186
2024-07-27 08:54:14,231 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.4 pTM=0.424 ipTM=0.161 tol=16.8
2024-07-27 08:54:26,749 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.7 pTM=0.419 ipTM=0.134 tol=10.9
2024-07-27 08:54:39,265 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.9 pTM=0.422 ipTM=0.143 tol=8.44
2024-07-27 08:54:51,769 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.1 pTM=0.431 ipTM=0.172 tol=5.65
2024-07-27 08:55:04,284 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.6 pTM=0.433 ipTM=0.202 tol=9.23
2024-07-27 08:55:16,804 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.9 pTM=0.43 ipTM=0.348 tol=4
2024-07-27 08:55:29,306 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62 pTM=0.431 ipTM=0.365 tol=4.56
2024-07-27 08:55:41,820 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.3 pTM=0.425 ipTM=0.396 tol=6.1
2024-07-27 08:55:54,341 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.2 pTM=0.43 ipTM=0.372 tol=5.11
2024-07-27 08:56:06,858 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.7 pTM=0.427 ipTM=0.367 tol=4.75
2024-07-27 08:56:19,373 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.5 pTM=0.431 ipTM=0.37 tol=2.68
2024-07-27 08:56:31,896 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.4 pTM=0.428 ipTM=0.376 tol=4.16
2024-07-27 08:56:44,420 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.429 ipTM=0.385 tol=3.46
2024-07-27 08:56:56,929 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.3 pTM=0.425 ipTM=0.398 tol=3.98
2024-07-27 08:57:09,439 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.2 pTM=0.428 ipTM=0.387 tol=2.55
2024-07-27 08:57:21,949 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.4 pTM=0.427 ipTM=0.389 tol=1.95
2024-07-27 08:57:34,454 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.3 pTM=0.431 ipTM=0.397 tol=3.27
2024-07-27 08:57:46,974 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.5 pTM=0.425 ipTM=0.417 tol=4.77
2024-07-27 08:57:59,495 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.4 pTM=0.431 ipTM=0.4 tol=2.25
2024-07-27 08:58:11,988 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.7 pTM=0.432 ipTM=0.41 tol=1.86
2024-07-27 08:58:24,478 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.2 pTM=0.438 ipTM=0.416 tol=2.48
2024-07-27 08:58:36,978 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.2 pTM=0.432 ipTM=0.415 tol=1.78
2024-07-27 08:58:49,476 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.4 pTM=0.434 ipTM=0.406 tol=2.43
2024-07-27 08:59:01,997 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.7 pTM=0.428 ipTM=0.428 tol=2.66
2024-07-27 08:59:14,507 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.2 pTM=0.437 ipTM=0.406 tol=2.96
2024-07-27 08:59:27,024 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.7 pTM=0.429 ipTM=0.432 tol=3.11
2024-07-27 08:59:39,517 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.4 pTM=0.435 ipTM=0.42 tol=2.57
2024-07-27 08:59:52,006 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.7 pTM=0.43 ipTM=0.429 tol=2
2024-07-27 09:00:04,513 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.3 pTM=0.435 ipTM=0.399 tol=2.77
2024-07-27 09:00:17,019 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.4 pTM=0.428 ipTM=0.416 tol=2.21
2024-07-27 09:00:17,019 alphafold2_multimer_v3_model_3_seed_000 took 387.8s (30 recycles)
2024-07-27 09:00:29,877 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.2 pTM=0.411 ipTM=0.147
2024-07-27 09:00:42,321 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.8 pTM=0.419 ipTM=0.154 tol=9.46
2024-07-27 09:00:54,793 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.2 pTM=0.431 ipTM=0.175 tol=13.3
2024-07-27 09:01:07,279 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61 pTM=0.485 ipTM=0.355 tol=6.41
2024-07-27 09:01:19,762 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.4 pTM=0.478 ipTM=0.336 tol=5.44
2024-07-27 09:01:32,248 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.4 pTM=0.444 ipTM=0.212 tol=3.89
2024-07-27 09:01:44,742 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61 pTM=0.45 ipTM=0.231 tol=7.76
2024-07-27 09:01:57,228 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.4 pTM=0.447 ipTM=0.221 tol=4.62
2024-07-27 09:02:09,721 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.2 pTM=0.477 ipTM=0.333 tol=7.3
2024-07-27 09:02:22,208 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.7 pTM=0.448 ipTM=0.238 tol=4.48
2024-07-27 09:02:34,717 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.4 pTM=0.446 ipTM=0.222 tol=4.9
2024-07-27 09:02:47,230 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.3 pTM=0.439 ipTM=0.199 tol=3.65
2024-07-27 09:02:59,745 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.2 pTM=0.447 ipTM=0.226 tol=6.31
2024-07-27 09:03:12,244 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.4 pTM=0.45 ipTM=0.234 tol=4.61
2024-07-27 09:03:24,752 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.3 pTM=0.456 ipTM=0.25 tol=4.3
2024-07-27 09:03:37,248 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.8 pTM=0.446 ipTM=0.224 tol=6.12
2024-07-27 09:03:49,754 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.3 pTM=0.453 ipTM=0.241 tol=4.6
2024-07-27 09:04:02,266 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.3 pTM=0.446 ipTM=0.221 tol=4.92
2024-07-27 09:04:14,772 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.8 pTM=0.452 ipTM=0.24 tol=4.55
2024-07-27 09:04:27,271 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.2 pTM=0.501 ipTM=0.409 tol=7.09
2024-07-27 09:04:39,784 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.8 pTM=0.477 ipTM=0.335 tol=6.42
2024-07-27 09:04:52,292 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61 pTM=0.459 ipTM=0.262 tol=4.96
2024-07-27 09:05:04,784 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.7 pTM=0.45 ipTM=0.236 tol=2.54
2024-07-27 09:05:17,303 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.5 pTM=0.451 ipTM=0.233 tol=4.02
2024-07-27 09:05:29,822 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.4 pTM=0.454 ipTM=0.244 tol=3.38
2024-07-27 09:05:42,323 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.3 pTM=0.45 ipTM=0.232 tol=2.57
2024-07-27 09:05:54,824 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.1 pTM=0.451 ipTM=0.237 tol=2.85
2024-07-27 09:06:07,315 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.2 pTM=0.453 ipTM=0.238 tol=3.68
2024-07-27 09:06:19,833 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.9 pTM=0.453 ipTM=0.242 tol=4.14
2024-07-27 09:06:32,331 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.5 pTM=0.446 ipTM=0.22 tol=4.79
2024-07-27 09:06:44,831 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.454 ipTM=0.246 tol=5.66
2024-07-27 09:06:44,831 alphafold2_multimer_v3_model_4_seed_000 took 387.4s (30 recycles)
2024-07-27 09:06:57,718 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.6 pTM=0.41 ipTM=0.297
2024-07-27 09:07:10,196 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.7 pTM=0.408 ipTM=0.155 tol=9.55
2024-07-27 09:07:22,696 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.1 pTM=0.409 ipTM=0.129 tol=9.07
2024-07-27 09:07:35,204 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61 pTM=0.414 ipTM=0.138 tol=5.7
2024-07-27 09:07:47,717 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.4 pTM=0.41 ipTM=0.135 tol=4.71
2024-07-27 09:08:00,233 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.9 pTM=0.412 ipTM=0.135 tol=5.78
2024-07-27 09:08:12,747 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.9 pTM=0.417 ipTM=0.136 tol=6.52
2024-07-27 09:08:25,266 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61 pTM=0.419 ipTM=0.14 tol=6.18
2024-07-27 09:08:37,803 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.2 pTM=0.42 ipTM=0.143 tol=4.42
2024-07-27 09:08:50,332 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.1 pTM=0.421 ipTM=0.147 tol=8.88
2024-07-27 09:09:02,858 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.6 pTM=0.418 ipTM=0.138 tol=5.37
2024-07-27 09:09:15,369 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.7 pTM=0.419 ipTM=0.14 tol=6.02
2024-07-27 09:09:27,884 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60 pTM=0.42 ipTM=0.147 tol=7.93
2024-07-27 09:09:40,412 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.9 pTM=0.42 ipTM=0.144 tol=4.11
2024-07-27 09:09:52,941 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.8 pTM=0.42 ipTM=0.143 tol=6.85
2024-07-27 09:10:05,468 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.1 pTM=0.419 ipTM=0.14 tol=3.66
2024-07-27 09:10:17,994 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.8 pTM=0.418 ipTM=0.135 tol=3.71
2024-07-27 09:10:30,502 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.8 pTM=0.417 ipTM=0.137 tol=4.75
2024-07-27 09:10:43,014 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.5 pTM=0.42 ipTM=0.143 tol=5.2
2024-07-27 09:10:55,539 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.3 pTM=0.42 ipTM=0.144 tol=4.89
2024-07-27 09:11:08,054 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.3 pTM=0.418 ipTM=0.14 tol=4.95
2024-07-27 09:11:20,577 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.8 pTM=0.417 ipTM=0.137 tol=5.4
2024-07-27 09:11:33,095 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.3 pTM=0.418 ipTM=0.139 tol=3.39
2024-07-27 09:11:45,615 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.1 pTM=0.417 ipTM=0.138 tol=3.09
2024-07-27 09:11:58,145 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.8 pTM=0.417 ipTM=0.142 tol=3.37
2024-07-27 09:12:10,670 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.8 pTM=0.417 ipTM=0.139 tol=2.78
2024-07-27 09:12:23,203 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.1 pTM=0.416 ipTM=0.132 tol=8.18
2024-07-27 09:12:35,728 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61 pTM=0.413 ipTM=0.134 tol=4
2024-07-27 09:12:48,253 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.5 pTM=0.416 ipTM=0.142 tol=5.25
2024-07-27 09:13:00,766 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.2 pTM=0.416 ipTM=0.132 tol=3.19
2024-07-27 09:13:13,276 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.3 pTM=0.415 ipTM=0.129 tol=2.13
2024-07-27 09:13:13,277 alphafold2_multimer_v3_model_5_seed_000 took 388.0s (30 recycles)
2024-07-27 09:13:13,714 reranking models by 'multimer' metric
2024-07-27 09:13:17,295 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 09:14:25,069 Relaxation took 71.4s
2024-07-27 09:14:25,070 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.4 pTM=0.428 ipTM=0.416
2024-07-27 09:15:26,676 Relaxation took 61.6s
2024-07-27 09:15:26,677 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.454 ipTM=0.246
2024-07-27 09:16:31,654 Relaxation took 65.0s
2024-07-27 09:16:31,654 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.8 pTM=0.447 ipTM=0.223
2024-07-27 09:17:27,170 Relaxation took 55.5s
2024-07-27 09:17:27,170 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.6 pTM=0.449 ipTM=0.214
2024-07-27 09:18:24,889 Relaxation took 57.7s
2024-07-27 09:18:24,889 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.3 pTM=0.415 ipTM=0.129
2024-07-27 09:18:26,589 Done