2024-07-27 09:17:17,074 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 09:17:17,419 Running on GPU
2024-07-27 09:17:20,920 Found 6 citations for tools or databases
2024-07-27 09:17:20,920 Query 1/1: RNF115_RAB40AL (length 582)
2024-07-27 09:17:21,361 Sleeping for 9s. Reason: PENDING
2024-07-27 09:17:30,782 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:17:36,208 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:17:46,646 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:17:54,070 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:18:00,484 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:18:10,929 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:18:18,355 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:18:24,810 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:18:35,238 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:18:43,653 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:18:54,065 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:19:04,498 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:19:12,927 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:19:24,144 Sleeping for 8s. Reason: PENDING
2024-07-27 09:19:32,574 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:19:41,988 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:19:49,404 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:19:58,845 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:20:06,259 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:20:11,683 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:20:19,091 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:20:28,704 Setting max_seq=508, max_extra_seq=2048
2024-07-27 09:23:25,699 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45 pTM=0.354 ipTM=0.159
2024-07-27 09:23:32,842 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.7 pTM=0.367 ipTM=0.166 tol=7.89
2024-07-27 09:23:39,999 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.9 pTM=0.382 ipTM=0.237 tol=10.7
2024-07-27 09:23:47,165 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.372 ipTM=0.18 tol=8.77
2024-07-27 09:23:54,340 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47 pTM=0.363 ipTM=0.169 tol=4.5
2024-07-27 09:24:01,512 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.2 pTM=0.368 ipTM=0.182 tol=4.49
2024-07-27 09:24:08,695 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.6 pTM=0.365 ipTM=0.166 tol=3.27
2024-07-27 09:24:15,882 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.1 pTM=0.371 ipTM=0.169 tol=2.62
2024-07-27 09:24:23,080 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.8 pTM=0.367 ipTM=0.16 tol=2.63
2024-07-27 09:24:30,277 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.1 pTM=0.372 ipTM=0.17 tol=1.68
2024-07-27 09:24:37,485 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.8 pTM=0.37 ipTM=0.164 tol=1.35
2024-07-27 09:24:44,693 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.6 pTM=0.379 ipTM=0.179 tol=1.83
2024-07-27 09:24:51,913 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.9 pTM=0.369 ipTM=0.166 tol=2.66
2024-07-27 09:24:59,123 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.1 pTM=0.377 ipTM=0.18 tol=2.38
2024-07-27 09:25:06,338 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.8 pTM=0.371 ipTM=0.176 tol=2.22
2024-07-27 09:25:13,555 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.2 pTM=0.381 ipTM=0.182 tol=2
2024-07-27 09:25:20,774 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.6 pTM=0.372 ipTM=0.176 tol=2.76
2024-07-27 09:25:27,996 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.2 pTM=0.377 ipTM=0.176 tol=3.12
2024-07-27 09:25:35,225 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.8 pTM=0.37 ipTM=0.177 tol=2.12
2024-07-27 09:25:42,448 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.2 pTM=0.378 ipTM=0.182 tol=1.92
2024-07-27 09:25:49,676 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.8 pTM=0.37 ipTM=0.183 tol=1.91
2024-07-27 09:25:56,902 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48.1 pTM=0.375 ipTM=0.175 tol=2.03
2024-07-27 09:26:04,132 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.5 pTM=0.37 ipTM=0.184 tol=6.06
2024-07-27 09:26:11,359 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48 pTM=0.375 ipTM=0.179 tol=3.4
2024-07-27 09:26:18,594 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48 pTM=0.371 ipTM=0.177 tol=2.38
2024-07-27 09:26:25,831 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.2 pTM=0.378 ipTM=0.184 tol=3.62
2024-07-27 09:26:33,068 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.9 pTM=0.369 ipTM=0.186 tol=5.05
2024-07-27 09:26:40,305 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48 pTM=0.377 ipTM=0.178 tol=2.73
2024-07-27 09:26:47,542 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.5 pTM=0.37 ipTM=0.173 tol=8.52
2024-07-27 09:26:54,784 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.7 pTM=0.377 ipTM=0.186 tol=5.81
2024-07-27 09:27:02,032 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.5 pTM=0.369 ipTM=0.184 tol=2.83
2024-07-27 09:27:02,033 alphafold2_multimer_v3_model_1_seed_000 took 389.9s (30 recycles)
2024-07-27 09:27:09,485 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.1 pTM=0.411 ipTM=0.164
2024-07-27 09:27:16,720 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.8 pTM=0.374 ipTM=0.155 tol=9.25
2024-07-27 09:27:23,967 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48 pTM=0.367 ipTM=0.155 tol=11
2024-07-27 09:27:31,211 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48 pTM=0.369 ipTM=0.188 tol=4.52
2024-07-27 09:27:38,464 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49 pTM=0.376 ipTM=0.188 tol=3.51
2024-07-27 09:27:45,717 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.8 pTM=0.371 ipTM=0.204 tol=2.9
2024-07-27 09:27:52,964 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.2 pTM=0.376 ipTM=0.2 tol=1.63
2024-07-27 09:28:00,213 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.1 pTM=0.371 ipTM=0.204 tol=2.89
2024-07-27 09:28:07,460 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49 pTM=0.371 ipTM=0.191 tol=1.46
2024-07-27 09:28:14,717 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.9 pTM=0.366 ipTM=0.176 tol=1.34
2024-07-27 09:28:21,964 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49 pTM=0.372 ipTM=0.186 tol=2.65
2024-07-27 09:28:29,214 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.8 pTM=0.37 ipTM=0.202 tol=2.59
2024-07-27 09:28:36,459 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49 pTM=0.373 ipTM=0.187 tol=1.49
2024-07-27 09:28:43,707 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.369 ipTM=0.198 tol=2.54
2024-07-27 09:28:50,954 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.8 pTM=0.373 ipTM=0.186 tol=1.78
2024-07-27 09:28:58,205 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.8 pTM=0.37 ipTM=0.2 tol=2
2024-07-27 09:29:05,455 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.9 pTM=0.375 ipTM=0.186 tol=1.37
2024-07-27 09:29:12,704 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.4 pTM=0.37 ipTM=0.197 tol=1.58
2024-07-27 09:29:19,951 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.3 pTM=0.374 ipTM=0.198 tol=1.92
2024-07-27 09:29:27,201 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.6 pTM=0.373 ipTM=0.207 tol=2.44
2024-07-27 09:29:34,450 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.6 pTM=0.371 ipTM=0.194 tol=5.08
2024-07-27 09:29:41,698 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.7 pTM=0.371 ipTM=0.195 tol=4.43
2024-07-27 09:29:48,948 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.2 pTM=0.372 ipTM=0.197 tol=1.68
2024-07-27 09:29:56,202 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.5 pTM=0.369 ipTM=0.19 tol=2.1
2024-07-27 09:30:03,450 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.6 pTM=0.37 ipTM=0.188 tol=2.46
2024-07-27 09:30:10,699 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.5 pTM=0.369 ipTM=0.185 tol=1.91
2024-07-27 09:30:17,945 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.6 pTM=0.371 ipTM=0.191 tol=1.38
2024-07-27 09:30:25,191 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.2 pTM=0.369 ipTM=0.184 tol=1.79
2024-07-27 09:30:32,436 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48 pTM=0.37 ipTM=0.182 tol=1.48
2024-07-27 09:30:39,688 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.3 pTM=0.368 ipTM=0.179 tol=2.75
2024-07-27 09:30:46,939 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.5 pTM=0.369 ipTM=0.183 tol=2.67
2024-07-27 09:30:46,940 alphafold2_multimer_v3_model_2_seed_000 took 224.7s (30 recycles)
2024-07-27 09:30:54,431 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.7 pTM=0.394 ipTM=0.333
2024-07-27 09:31:01,698 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.5 pTM=0.381 ipTM=0.208 tol=8.5
2024-07-27 09:31:08,971 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.1 pTM=0.406 ipTM=0.456 tol=13.8
2024-07-27 09:31:16,249 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.3 pTM=0.367 ipTM=0.149 tol=12.4
2024-07-27 09:31:23,522 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.5 pTM=0.372 ipTM=0.153 tol=3.57
2024-07-27 09:31:30,795 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.7 pTM=0.371 ipTM=0.146 tol=3.47
2024-07-27 09:31:38,063 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.6 pTM=0.372 ipTM=0.148 tol=1.85
2024-07-27 09:31:45,332 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.7 pTM=0.37 ipTM=0.157 tol=1.38
2024-07-27 09:31:52,602 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.6 pTM=0.37 ipTM=0.158 tol=1.26
2024-07-27 09:31:59,867 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.1 pTM=0.373 ipTM=0.149 tol=1.74
2024-07-27 09:32:07,141 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.8 pTM=0.373 ipTM=0.16 tol=1.48
2024-07-27 09:32:14,401 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46.8 pTM=0.371 ipTM=0.153 tol=1.05
2024-07-27 09:32:21,659 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.5 pTM=0.371 ipTM=0.156 tol=1.76
2024-07-27 09:32:28,925 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.8 pTM=0.373 ipTM=0.161 tol=2.08
2024-07-27 09:32:36,192 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.7 pTM=0.371 ipTM=0.151 tol=1.79
2024-07-27 09:32:43,460 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.8 pTM=0.372 ipTM=0.158 tol=1.66
2024-07-27 09:32:50,729 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.5 pTM=0.368 ipTM=0.15 tol=1.88
2024-07-27 09:32:58,000 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.9 pTM=0.374 ipTM=0.159 tol=1.77
2024-07-27 09:33:05,270 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.6 pTM=0.371 ipTM=0.156 tol=1.84
2024-07-27 09:33:12,539 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.6 pTM=0.374 ipTM=0.158 tol=2.11
2024-07-27 09:33:19,804 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.6 pTM=0.37 ipTM=0.165 tol=2.02
2024-07-27 09:33:27,076 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.8 pTM=0.37 ipTM=0.155 tol=2.16
2024-07-27 09:33:34,344 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.7 pTM=0.374 ipTM=0.162 tol=2.25
2024-07-27 09:33:41,614 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.9 pTM=0.369 ipTM=0.152 tol=1.07
2024-07-27 09:33:48,883 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.8 pTM=0.374 ipTM=0.159 tol=1.21
2024-07-27 09:33:56,149 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.7 pTM=0.368 ipTM=0.145 tol=1.3
2024-07-27 09:34:03,408 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.8 pTM=0.374 ipTM=0.157 tol=1.33
2024-07-27 09:34:10,672 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.4 pTM=0.367 ipTM=0.147 tol=1.54
2024-07-27 09:34:17,941 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.7 pTM=0.372 ipTM=0.16 tol=2.82
2024-07-27 09:34:25,204 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.3 pTM=0.367 ipTM=0.151 tol=2.32
2024-07-27 09:34:32,474 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.5 pTM=0.373 ipTM=0.156 tol=2.33
2024-07-27 09:34:32,474 alphafold2_multimer_v3_model_3_seed_000 took 225.3s (30 recycles)
2024-07-27 09:34:39,947 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=44.9 pTM=0.365 ipTM=0.222
2024-07-27 09:34:47,190 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.4 pTM=0.389 ipTM=0.341 tol=17.4
2024-07-27 09:34:54,434 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.7 pTM=0.385 ipTM=0.167 tol=12.9
2024-07-27 09:35:01,682 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.4 pTM=0.37 ipTM=0.171 tol=6.19
2024-07-27 09:35:08,937 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.1 pTM=0.363 ipTM=0.179 tol=4.74
2024-07-27 09:35:16,185 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.2 pTM=0.365 ipTM=0.169 tol=9.12
2024-07-27 09:35:23,429 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.4 pTM=0.362 ipTM=0.168 tol=5.13
2024-07-27 09:35:30,680 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.3 pTM=0.362 ipTM=0.17 tol=3.99
2024-07-27 09:35:37,923 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.6 pTM=0.369 ipTM=0.174 tol=8.15
2024-07-27 09:35:45,171 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.8 pTM=0.363 ipTM=0.167 tol=4.75
2024-07-27 09:35:52,414 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.7 pTM=0.361 ipTM=0.173 tol=4.22
2024-07-27 09:35:59,669 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.7 pTM=0.357 ipTM=0.177 tol=8.98
2024-07-27 09:36:06,915 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.5 pTM=0.362 ipTM=0.17 tol=3.12
2024-07-27 09:36:14,153 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.1 pTM=0.386 ipTM=0.276 tol=8.91
2024-07-27 09:36:21,394 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.2 pTM=0.375 ipTM=0.167 tol=4.01
2024-07-27 09:36:28,642 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.6 pTM=0.367 ipTM=0.167 tol=4.21
2024-07-27 09:36:35,877 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.8 pTM=0.379 ipTM=0.192 tol=4.25
2024-07-27 09:36:43,114 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.1 pTM=0.376 ipTM=0.162 tol=3.1
2024-07-27 09:36:50,350 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.8 pTM=0.374 ipTM=0.166 tol=1.55
2024-07-27 09:36:57,586 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.8 pTM=0.375 ipTM=0.165 tol=1.47
2024-07-27 09:37:04,826 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.2 pTM=0.372 ipTM=0.167 tol=2.57
2024-07-27 09:37:12,067 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.9 pTM=0.369 ipTM=0.168 tol=3.97
2024-07-27 09:37:19,301 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.4 pTM=0.375 ipTM=0.177 tol=4
2024-07-27 09:37:26,550 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.4 pTM=0.359 ipTM=0.169 tol=4.09
2024-07-27 09:37:33,799 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.7 pTM=0.361 ipTM=0.169 tol=2.14
2024-07-27 09:37:41,055 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.3 pTM=0.356 ipTM=0.174 tol=7.41
2024-07-27 09:37:48,303 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.9 pTM=0.364 ipTM=0.171 tol=5.43
2024-07-27 09:37:55,547 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.8 pTM=0.368 ipTM=0.17 tol=9.68
2024-07-27 09:38:02,802 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.8 pTM=0.364 ipTM=0.168 tol=4.02
2024-07-27 09:38:10,045 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.1 pTM=0.365 ipTM=0.177 tol=3.7
2024-07-27 09:38:17,288 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.7 pTM=0.381 ipTM=0.18 tol=5.16
2024-07-27 09:38:17,289 alphafold2_multimer_v3_model_4_seed_000 took 224.6s (30 recycles)
2024-07-27 09:38:24,780 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.8 pTM=0.391 ipTM=0.277
2024-07-27 09:38:32,056 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46 pTM=0.372 ipTM=0.217 tol=11.1
2024-07-27 09:38:39,346 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.9 pTM=0.363 ipTM=0.161 tol=9.39
2024-07-27 09:38:46,631 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.2 pTM=0.381 ipTM=0.194 tol=5.69
2024-07-27 09:38:53,922 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46 pTM=0.367 ipTM=0.156 tol=4.22
2024-07-27 09:39:01,211 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.3 pTM=0.367 ipTM=0.163 tol=2.71
2024-07-27 09:39:08,500 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.1 pTM=0.365 ipTM=0.158 tol=2.54
2024-07-27 09:39:15,783 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.2 pTM=0.365 ipTM=0.159 tol=3.47
2024-07-27 09:39:23,063 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.2 pTM=0.364 ipTM=0.155 tol=1.82
2024-07-27 09:39:30,346 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.5 pTM=0.364 ipTM=0.161 tol=1.66
2024-07-27 09:39:37,630 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.2 pTM=0.365 ipTM=0.158 tol=2.59
2024-07-27 09:39:44,912 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.7 pTM=0.364 ipTM=0.157 tol=3.18
2024-07-27 09:39:52,194 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.3 pTM=0.361 ipTM=0.157 tol=3.36
2024-07-27 09:39:59,469 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.2 pTM=0.366 ipTM=0.159 tol=3.68
2024-07-27 09:40:06,744 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.4 pTM=0.365 ipTM=0.156 tol=3.35
2024-07-27 09:40:14,024 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.4 pTM=0.366 ipTM=0.161 tol=2.51
2024-07-27 09:40:21,304 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.4 pTM=0.363 ipTM=0.157 tol=2.56
2024-07-27 09:40:28,583 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.4 pTM=0.364 ipTM=0.16 tol=2.61
2024-07-27 09:40:35,861 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.9 pTM=0.362 ipTM=0.159 tol=2.22
2024-07-27 09:40:43,135 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.1 pTM=0.364 ipTM=0.162 tol=2.49
2024-07-27 09:40:50,410 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.2 pTM=0.365 ipTM=0.158 tol=2.04
2024-07-27 09:40:57,689 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.2 pTM=0.365 ipTM=0.16 tol=2.05
2024-07-27 09:41:04,955 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.1 pTM=0.366 ipTM=0.16 tol=2.17
2024-07-27 09:41:12,227 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.6 pTM=0.371 ipTM=0.17 tol=2.62
2024-07-27 09:41:19,496 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.3 pTM=0.367 ipTM=0.157 tol=1.72
2024-07-27 09:41:26,774 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.8 pTM=0.375 ipTM=0.177 tol=2.75
2024-07-27 09:41:34,048 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.2 pTM=0.368 ipTM=0.161 tol=2.5
2024-07-27 09:41:41,325 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.4 pTM=0.368 ipTM=0.161 tol=2.49
2024-07-27 09:41:48,596 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.3 pTM=0.365 ipTM=0.158 tol=1.9
2024-07-27 09:41:55,865 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.3 pTM=0.368 ipTM=0.164 tol=2.21
2024-07-27 09:42:03,143 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.2 pTM=0.363 ipTM=0.153 tol=1.95
2024-07-27 09:42:03,143 alphafold2_multimer_v3_model_5_seed_000 took 225.6s (30 recycles)
2024-07-27 09:42:03,375 reranking models by 'multimer' metric
2024-07-27 09:42:06,334 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 09:43:01,483 Relaxation took 58.1s
2024-07-27 09:43:01,483 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.5 pTM=0.369 ipTM=0.184
2024-07-27 09:43:51,520 Relaxation took 50.0s
2024-07-27 09:43:51,521 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.5 pTM=0.369 ipTM=0.183
2024-07-27 09:44:37,230 Relaxation took 45.7s
2024-07-27 09:44:37,230 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.7 pTM=0.381 ipTM=0.18
2024-07-27 09:45:19,863 Relaxation took 42.6s
2024-07-27 09:45:19,863 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.5 pTM=0.373 ipTM=0.156
2024-07-27 09:46:00,263 Relaxation took 40.4s
2024-07-27 09:46:00,263 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.2 pTM=0.363 ipTM=0.153
2024-07-27 09:46:01,650 Done