2024-07-27 09:23:51,269 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 09:23:51,588 Running on GPU 2024-07-27 09:23:54,954 Found 6 citations for tools or databases 2024-07-27 09:23:54,954 Query 1/1: RNF4_FBXL14 (length 609) 2024-07-27 09:23:55,437 Sleeping for 8s. Reason: PENDING 2024-07-27 09:24:03,858 Sleeping for 6s. Reason: RUNNING 2024-07-27 09:24:10,280 Sleeping for 6s. Reason: RUNNING 2024-07-27 09:24:16,704 Sleeping for 8s. Reason: RUNNING 2024-07-27 09:24:25,120 Sleeping for 5s. Reason: RUNNING 2024-07-27 09:24:30,560 Sleeping for 6s. Reason: RUNNING 2024-07-27 09:24:36,988 Sleeping for 9s. Reason: RUNNING 2024-07-27 09:24:46,421 Sleeping for 9s. Reason: RUNNING 2024-07-27 09:24:55,888 Sleeping for 9s. Reason: RUNNING 2024-07-27 09:25:05,315 Sleeping for 5s. Reason: RUNNING 2024-07-27 09:25:10,731 Sleeping for 7s. Reason: RUNNING 2024-07-27 09:25:18,157 Sleeping for 7s. Reason: RUNNING 2024-07-27 09:25:25,579 Sleeping for 6s. Reason: RUNNING 2024-07-27 09:25:32,037 Sleeping for 8s. Reason: RUNNING 2024-07-27 09:25:42,108 Sleeping for 5s. Reason: PENDING 2024-07-27 09:25:47,591 Sleeping for 10s. Reason: RUNNING 2024-07-27 09:25:58,033 Sleeping for 8s. Reason: RUNNING 2024-07-27 09:26:06,472 Sleeping for 9s. Reason: RUNNING 2024-07-27 09:26:15,899 Sleeping for 8s. Reason: RUNNING 2024-07-27 09:26:24,318 Sleeping for 10s. Reason: RUNNING 2024-07-27 09:26:37,102 Setting max_seq=508, max_extra_seq=2048 2024-07-27 09:30:00,309 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.8 pTM=0.657 ipTM=0.208 2024-07-27 09:30:07,895 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.8 pTM=0.644 ipTM=0.302 tol=11.2 2024-07-27 09:30:15,490 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.6 pTM=0.639 ipTM=0.282 tol=5.85 2024-07-27 09:30:23,083 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.2 pTM=0.625 ipTM=0.198 tol=3.81 2024-07-27 09:30:30,709 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.3 pTM=0.623 ipTM=0.196 tol=2.4 2024-07-27 09:30:38,323 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.2 pTM=0.626 ipTM=0.21 tol=1.99 2024-07-27 09:30:45,953 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.2 pTM=0.625 ipTM=0.205 tol=3.49 2024-07-27 09:30:53,585 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.2 pTM=0.625 ipTM=0.21 tol=3.05 2024-07-27 09:31:01,237 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.8 pTM=0.621 ipTM=0.187 tol=3.64 2024-07-27 09:31:08,868 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67 pTM=0.62 ipTM=0.205 tol=2.78 2024-07-27 09:31:16,510 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.8 pTM=0.615 ipTM=0.182 tol=4.32 2024-07-27 09:31:24,154 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.9 pTM=0.617 ipTM=0.19 tol=2.22 2024-07-27 09:31:31,808 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.621 ipTM=0.231 tol=3.59 2024-07-27 09:31:39,466 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.9 pTM=0.62 ipTM=0.199 tol=4.07 2024-07-27 09:31:47,125 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.9 pTM=0.622 ipTM=0.196 tol=3.88 2024-07-27 09:31:54,785 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.4 pTM=0.621 ipTM=0.192 tol=2.81 2024-07-27 09:32:02,457 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.1 pTM=0.619 ipTM=0.188 tol=2.12 2024-07-27 09:32:10,115 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.1 pTM=0.625 ipTM=0.265 tol=8.55 2024-07-27 09:32:17,787 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.7 pTM=0.622 ipTM=0.197 tol=7.52 2024-07-27 09:32:25,444 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.8 pTM=0.623 ipTM=0.203 tol=6.16 2024-07-27 09:32:33,118 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.6 pTM=0.617 ipTM=0.185 tol=2.9 2024-07-27 09:32:40,768 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.5 pTM=0.617 ipTM=0.189 tol=3.37 2024-07-27 09:32:48,438 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.8 pTM=0.626 ipTM=0.215 tol=3.51 2024-07-27 09:32:56,110 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.5 pTM=0.634 ipTM=0.244 tol=4.77 2024-07-27 09:33:03,779 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.1 pTM=0.625 ipTM=0.225 tol=3.22 2024-07-27 09:33:11,448 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.9 pTM=0.623 ipTM=0.199 tol=2.57 2024-07-27 09:33:19,119 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.8 pTM=0.618 ipTM=0.188 tol=2.74 2024-07-27 09:33:26,797 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.2 pTM=0.625 ipTM=0.205 tol=5.36 2024-07-27 09:33:34,469 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.9 pTM=0.622 ipTM=0.209 tol=5.1 2024-07-27 09:33:42,131 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.6 pTM=0.625 ipTM=0.205 tol=3.17 2024-07-27 09:33:49,788 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.6 pTM=0.65 ipTM=0.407 tol=3.38 2024-07-27 09:33:49,789 alphafold2_multimer_v3_model_1_seed_000 took 427.7s (30 recycles) 2024-07-27 09:33:57,716 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.8 pTM=0.65 ipTM=0.167 2024-07-27 09:34:05,403 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.2 pTM=0.655 ipTM=0.22 tol=11.5 2024-07-27 09:34:13,098 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.1 pTM=0.659 ipTM=0.247 tol=3.25 2024-07-27 09:34:20,783 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.4 pTM=0.65 ipTM=0.239 tol=3.17 2024-07-27 09:34:28,466 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.7 pTM=0.659 ipTM=0.271 tol=1.79 2024-07-27 09:34:36,157 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.2 pTM=0.659 ipTM=0.309 tol=3.32 2024-07-27 09:34:43,834 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.4 pTM=0.654 ipTM=0.249 tol=5.73 2024-07-27 09:34:51,521 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.4 pTM=0.649 ipTM=0.23 tol=3.41 2024-07-27 09:34:59,214 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.5 pTM=0.647 ipTM=0.236 tol=5.66 2024-07-27 09:35:06,898 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.7 pTM=0.65 ipTM=0.344 tol=3.07 2024-07-27 09:35:14,574 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68 pTM=0.644 ipTM=0.237 tol=3.65 2024-07-27 09:35:22,258 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.1 pTM=0.654 ipTM=0.262 tol=6.31 2024-07-27 09:35:29,941 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.3 pTM=0.645 ipTM=0.237 tol=2.92 2024-07-27 09:35:37,610 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.2 pTM=0.656 ipTM=0.262 tol=6.57 2024-07-27 09:35:45,292 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.8 pTM=0.642 ipTM=0.231 tol=4.25 2024-07-27 09:35:52,967 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.9 pTM=0.641 ipTM=0.236 tol=4.72 2024-07-27 09:36:00,654 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.8 pTM=0.644 ipTM=0.24 tol=4.19 2024-07-27 09:36:08,338 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.9 pTM=0.644 ipTM=0.243 tol=2.87 2024-07-27 09:36:16,024 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.4 pTM=0.636 ipTM=0.22 tol=3.15 2024-07-27 09:36:23,702 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.8 pTM=0.641 ipTM=0.238 tol=3.77 2024-07-27 09:36:31,391 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.4 pTM=0.641 ipTM=0.238 tol=6.13 2024-07-27 09:36:39,062 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.4 pTM=0.653 ipTM=0.298 tol=3.71 2024-07-27 09:36:46,739 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.4 pTM=0.638 ipTM=0.225 tol=2.21 2024-07-27 09:36:54,420 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.9 pTM=0.643 ipTM=0.242 tol=2.79 2024-07-27 09:37:02,107 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.3 pTM=0.661 ipTM=0.337 tol=6.28 2024-07-27 09:37:09,783 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.6 pTM=0.647 ipTM=0.249 tol=4.69 2024-07-27 09:37:17,467 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68 pTM=0.655 ipTM=0.269 tol=4.78 2024-07-27 09:37:25,160 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.1 pTM=0.651 ipTM=0.253 tol=4.17 2024-07-27 09:37:32,840 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.9 pTM=0.649 ipTM=0.258 tol=4.37 2024-07-27 09:37:40,526 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.7 pTM=0.642 ipTM=0.243 tol=4.32 2024-07-27 09:37:48,205 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.2 pTM=0.647 ipTM=0.242 tol=3.59 2024-07-27 09:37:48,205 alphafold2_multimer_v3_model_2_seed_000 took 238.2s (30 recycles) 2024-07-27 09:37:56,128 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.4 pTM=0.667 ipTM=0.426 2024-07-27 09:38:03,813 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.4 pTM=0.662 ipTM=0.209 tol=5.94 2024-07-27 09:38:11,493 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69 pTM=0.656 ipTM=0.191 tol=6.29 2024-07-27 09:38:19,158 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.9 pTM=0.664 ipTM=0.427 tol=3.3 2024-07-27 09:38:26,822 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.1 pTM=0.674 ipTM=0.443 tol=3.73 2024-07-27 09:38:34,484 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.9 pTM=0.659 ipTM=0.205 tol=3.08 2024-07-27 09:38:42,165 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.8 pTM=0.658 ipTM=0.196 tol=3.15 2024-07-27 09:38:49,847 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70 pTM=0.669 ipTM=0.502 tol=3.19 2024-07-27 09:38:57,518 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.1 pTM=0.663 ipTM=0.279 tol=3.65 2024-07-27 09:39:05,191 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.9 pTM=0.669 ipTM=0.532 tol=3.61 2024-07-27 09:39:12,851 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.8 pTM=0.658 ipTM=0.244 tol=3.62 2024-07-27 09:39:20,525 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.5 pTM=0.669 ipTM=0.5 tol=2.51 2024-07-27 09:39:28,181 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.4 pTM=0.66 ipTM=0.215 tol=4.86 2024-07-27 09:39:35,846 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.3 pTM=0.669 ipTM=0.385 tol=3.68 2024-07-27 09:39:43,511 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.3 pTM=0.656 ipTM=0.205 tol=2.6 2024-07-27 09:39:51,183 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.1 pTM=0.663 ipTM=0.308 tol=2.51 2024-07-27 09:39:58,846 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.5 pTM=0.661 ipTM=0.218 tol=2.47 2024-07-27 09:40:06,521 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.4 pTM=0.657 ipTM=0.236 tol=2.36 2024-07-27 09:40:14,180 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.7 pTM=0.677 ipTM=0.441 tol=6.56 2024-07-27 09:40:21,841 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69 pTM=0.673 ipTM=0.266 tol=7.47 2024-07-27 09:40:29,504 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.9 pTM=0.696 ipTM=0.412 tol=4.51 2024-07-27 09:40:37,172 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.4 pTM=0.676 ipTM=0.265 tol=4.79 2024-07-27 09:40:44,834 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.3 pTM=0.725 ipTM=0.469 tol=7.32 2024-07-27 09:40:52,501 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.1 pTM=0.685 ipTM=0.287 tol=3.51 2024-07-27 09:41:00,166 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.1 pTM=0.707 ipTM=0.408 tol=5.35 2024-07-27 09:41:07,842 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.5 pTM=0.694 ipTM=0.384 tol=4.98 2024-07-27 09:41:15,509 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.4 pTM=0.714 ipTM=0.442 tol=1.8 2024-07-27 09:41:23,177 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.7 pTM=0.685 ipTM=0.283 tol=2.9 2024-07-27 09:41:30,848 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.1 pTM=0.709 ipTM=0.406 tol=2.51 2024-07-27 09:41:38,501 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.7 pTM=0.682 ipTM=0.308 tol=4.82 2024-07-27 09:41:46,160 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.3 pTM=0.695 ipTM=0.331 tol=2.63 2024-07-27 09:41:46,160 alphafold2_multimer_v3_model_3_seed_000 took 237.7s (30 recycles) 2024-07-27 09:41:54,070 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.1 pTM=0.662 ipTM=0.233 2024-07-27 09:42:01,753 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.9 pTM=0.724 ipTM=0.456 tol=14.6 2024-07-27 09:42:09,440 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.3 pTM=0.689 ipTM=0.36 tol=10.1 2024-07-27 09:42:17,119 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.9 pTM=0.736 ipTM=0.5 tol=3.88 2024-07-27 09:42:24,798 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.9 pTM=0.7 ipTM=0.341 tol=1.49 2024-07-27 09:42:32,485 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.1 pTM=0.708 ipTM=0.36 tol=1.71 2024-07-27 09:42:40,175 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.3 pTM=0.707 ipTM=0.356 tol=1.25 2024-07-27 09:42:47,864 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70 pTM=0.702 ipTM=0.339 tol=1.66 2024-07-27 09:42:55,554 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.8 pTM=0.698 ipTM=0.326 tol=5.18 2024-07-27 09:43:03,237 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.7 pTM=0.695 ipTM=0.329 tol=5.68 2024-07-27 09:43:10,920 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70 pTM=0.701 ipTM=0.332 tol=4.46 2024-07-27 09:43:18,608 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.9 pTM=0.702 ipTM=0.331 tol=4.28 2024-07-27 09:43:26,288 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.4 pTM=0.712 ipTM=0.366 tol=2.92 2024-07-27 09:43:33,972 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.7 pTM=0.706 ipTM=0.36 tol=3.75 2024-07-27 09:43:41,655 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.2 pTM=0.7 ipTM=0.341 tol=2.71 2024-07-27 09:43:49,345 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.3 pTM=0.703 ipTM=0.355 tol=3.2 2024-07-27 09:43:57,038 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.5 pTM=0.709 ipTM=0.428 tol=9.3 2024-07-27 09:44:04,731 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.6 pTM=0.688 ipTM=0.302 tol=9.62 2024-07-27 09:44:12,426 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.2 pTM=0.691 ipTM=0.313 tol=9.59 2024-07-27 09:44:20,108 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.4 pTM=0.696 ipTM=0.319 tol=2.05 2024-07-27 09:44:27,797 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.2 pTM=0.71 ipTM=0.38 tol=2.42 2024-07-27 09:44:35,484 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.9 pTM=0.702 ipTM=0.343 tol=1.41 2024-07-27 09:44:43,164 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.9 pTM=0.719 ipTM=0.495 tol=1.98 2024-07-27 09:44:50,854 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.4 pTM=0.694 ipTM=0.309 tol=2.05 2024-07-27 09:44:58,539 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.3 pTM=0.713 ipTM=0.356 tol=2.51 2024-07-27 09:45:06,223 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.9 pTM=0.715 ipTM=0.522 tol=1.7 2024-07-27 09:45:13,908 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.9 pTM=0.705 ipTM=0.341 tol=2.56 2024-07-27 09:45:21,584 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.4 pTM=0.71 ipTM=0.348 tol=3.42 2024-07-27 09:45:29,264 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.4 pTM=0.708 ipTM=0.409 tol=1.7 2024-07-27 09:45:36,964 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70 pTM=0.706 ipTM=0.393 tol=4.12 2024-07-27 09:45:44,656 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.9 pTM=0.705 ipTM=0.338 tol=2.6 2024-07-27 09:45:44,657 alphafold2_multimer_v3_model_4_seed_000 took 238.3s (30 recycles) 2024-07-27 09:45:52,591 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.7 pTM=0.667 ipTM=0.422 2024-07-27 09:46:00,282 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.7 pTM=0.659 ipTM=0.205 tol=8.08 2024-07-27 09:46:07,978 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.4 pTM=0.691 ipTM=0.428 tol=6.3 2024-07-27 09:46:15,669 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.8 pTM=0.676 ipTM=0.264 tol=5.33 2024-07-27 09:46:23,369 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71 pTM=0.716 ipTM=0.547 tol=4.8 2024-07-27 09:46:31,059 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.4 pTM=0.688 ipTM=0.287 tol=2.63 2024-07-27 09:46:38,764 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.7 pTM=0.729 ipTM=0.637 tol=3.06 2024-07-27 09:46:46,444 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.4 pTM=0.709 ipTM=0.374 tol=7.15 2024-07-27 09:46:54,129 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.9 pTM=0.731 ipTM=0.506 tol=1.99 2024-07-27 09:47:01,810 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.8 pTM=0.71 ipTM=0.378 tol=5.94 2024-07-27 09:47:09,496 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.6 pTM=0.724 ipTM=0.582 tol=4.9 2024-07-27 09:47:17,178 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.2 pTM=0.708 ipTM=0.373 tol=11.2 2024-07-27 09:47:24,851 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.9 pTM=0.737 ipTM=0.542 tol=4.25 2024-07-27 09:47:32,528 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.1 pTM=0.706 ipTM=0.345 tol=3.94 2024-07-27 09:47:40,225 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.9 pTM=0.733 ipTM=0.561 tol=6.75 2024-07-27 09:47:47,899 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.5 pTM=0.711 ipTM=0.371 tol=6.82 2024-07-27 09:47:55,579 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.4 pTM=0.729 ipTM=0.468 tol=6.12 2024-07-27 09:48:03,265 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.4 pTM=0.696 ipTM=0.342 tol=4.71 2024-07-27 09:48:10,949 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.6 pTM=0.731 ipTM=0.619 tol=4.09 2024-07-27 09:48:18,637 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.2 pTM=0.707 ipTM=0.352 tol=8.34 2024-07-27 09:48:26,327 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.6 pTM=0.728 ipTM=0.632 tol=4.81 2024-07-27 09:48:34,002 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70 pTM=0.709 ipTM=0.402 tol=5.52 2024-07-27 09:48:41,688 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.9 pTM=0.734 ipTM=0.672 tol=3.79 2024-07-27 09:48:49,361 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70 pTM=0.714 ipTM=0.365 tol=4.86 2024-07-27 09:48:57,038 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.8 pTM=0.736 ipTM=0.534 tol=1.68 2024-07-27 09:49:04,712 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.8 pTM=0.708 ipTM=0.346 tol=1.86 2024-07-27 09:49:12,386 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.2 pTM=0.732 ipTM=0.561 tol=1.9 2024-07-27 09:49:20,058 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.1 pTM=0.713 ipTM=0.406 tol=6.21 2024-07-27 09:49:27,739 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.9 pTM=0.727 ipTM=0.57 tol=7 2024-07-27 09:49:35,403 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.9 pTM=0.711 ipTM=0.515 tol=7.54 2024-07-27 09:49:43,079 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.2 pTM=0.728 ipTM=0.582 tol=3.75 2024-07-27 09:49:43,080 alphafold2_multimer_v3_model_5_seed_000 took 238.2s (30 recycles) 2024-07-27 09:49:43,322 reranking models by 'multimer' metric 2024-07-27 09:49:44,271 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 09:50:29,709 Relaxation took 46.4s 2024-07-27 09:50:29,709 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.2 pTM=0.728 ipTM=0.582 2024-07-27 09:51:05,107 Relaxation took 35.4s 2024-07-27 09:51:05,107 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.6 pTM=0.65 ipTM=0.407 2024-07-27 09:51:42,884 Relaxation took 37.8s 2024-07-27 09:51:42,884 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.9 pTM=0.705 ipTM=0.338 2024-07-27 09:52:26,081 Relaxation took 43.2s 2024-07-27 09:52:26,081 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.3 pTM=0.695 ipTM=0.331 2024-07-27 09:52:58,787 Relaxation took 32.7s 2024-07-27 09:52:58,787 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.2 pTM=0.647 ipTM=0.242 2024-07-27 09:53:00,039 Done