2024-07-27 09:46:50,302 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 09:46:50,605 Running on GPU
2024-07-27 09:46:51,449 Found 6 citations for tools or databases
2024-07-27 09:46:51,449 Query 1/1: RNF4_KCTD2 (length 454)
2024-07-27 09:46:51,901 Sleeping for 10s. Reason: PENDING
2024-07-27 09:47:02,311 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:47:10,723 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:47:16,143 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:47:22,564 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:47:29,000 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:47:37,432 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:47:44,871 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:47:54,300 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:48:04,737 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:48:10,182 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:48:20,302 Sleeping for 6s. Reason: PENDING
2024-07-27 09:48:26,736 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:48:33,145 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:48:38,569 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:48:47,989 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:49:00,679 Setting max_seq=508, max_extra_seq=2048
2024-07-27 09:52:02,921 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.6 pTM=0.309 ipTM=0.344
2024-07-27 09:52:07,777 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.8 pTM=0.31 ipTM=0.149 tol=14.8
2024-07-27 09:52:12,629 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.1 pTM=0.313 ipTM=0.143 tol=9.02
2024-07-27 09:52:17,484 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.8 pTM=0.31 ipTM=0.134 tol=6.78
2024-07-27 09:52:22,339 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.7 pTM=0.308 ipTM=0.124 tol=7.84
2024-07-27 09:52:27,188 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.5 pTM=0.311 ipTM=0.138 tol=10.2
2024-07-27 09:52:32,046 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47 pTM=0.309 ipTM=0.17 tol=6.7
2024-07-27 09:52:36,896 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.5 pTM=0.314 ipTM=0.177 tol=5.15
2024-07-27 09:52:41,747 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.3 pTM=0.311 ipTM=0.176 tol=5
2024-07-27 09:52:46,596 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.7 pTM=0.316 ipTM=0.214 tol=4.64
2024-07-27 09:52:51,451 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.7 pTM=0.313 ipTM=0.193 tol=3.51
2024-07-27 09:52:56,303 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.1 pTM=0.313 ipTM=0.181 tol=3.53
2024-07-27 09:53:01,162 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.2 pTM=0.311 ipTM=0.18 tol=3.08
2024-07-27 09:53:06,028 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.5 pTM=0.31 ipTM=0.184 tol=3.19
2024-07-27 09:53:10,891 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.4 pTM=0.309 ipTM=0.188 tol=3.43
2024-07-27 09:53:15,745 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.1 pTM=0.311 ipTM=0.178 tol=2.96
2024-07-27 09:53:20,607 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.5 pTM=0.307 ipTM=0.182 tol=5.63
2024-07-27 09:53:25,484 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.9 pTM=0.306 ipTM=0.178 tol=3.58
2024-07-27 09:53:30,356 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.2 pTM=0.312 ipTM=0.196 tol=2.77
2024-07-27 09:53:35,206 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.7 pTM=0.312 ipTM=0.235 tol=2.38
2024-07-27 09:53:40,071 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49 pTM=0.312 ipTM=0.221 tol=2.65
2024-07-27 09:53:44,935 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.2 pTM=0.312 ipTM=0.217 tol=1.92
2024-07-27 09:53:49,818 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=48.9 pTM=0.313 ipTM=0.227 tol=2.21
2024-07-27 09:53:54,684 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49 pTM=0.313 ipTM=0.229 tol=2.22
2024-07-27 09:53:59,549 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.7 pTM=0.312 ipTM=0.225 tol=3.13
2024-07-27 09:54:04,409 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.8 pTM=0.314 ipTM=0.228 tol=2.9
2024-07-27 09:54:09,269 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.7 pTM=0.319 ipTM=0.257 tol=3.77
2024-07-27 09:54:14,127 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49 pTM=0.314 ipTM=0.234 tol=2.64
2024-07-27 09:54:18,994 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.1 pTM=0.311 ipTM=0.173 tol=2.39
2024-07-27 09:54:23,858 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.7 pTM=0.31 ipTM=0.162 tol=3.04
2024-07-27 09:54:28,721 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.6 pTM=0.321 ipTM=0.259 tol=3.15
2024-07-27 09:54:28,722 alphafold2_multimer_v3_model_1_seed_000 took 323.1s (30 recycles)
2024-07-27 09:54:33,748 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.8 pTM=0.308 ipTM=0.152
2024-07-27 09:54:38,634 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.6 pTM=0.31 ipTM=0.136 tol=9.88
2024-07-27 09:54:43,508 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.7 pTM=0.311 ipTM=0.132 tol=5.01
2024-07-27 09:54:48,390 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.7 pTM=0.316 ipTM=0.166 tol=11.8
2024-07-27 09:54:53,275 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.7 pTM=0.314 ipTM=0.133 tol=8.44
2024-07-27 09:54:58,165 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.2 pTM=0.315 ipTM=0.165 tol=3.18
2024-07-27 09:55:03,046 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.9 pTM=0.316 ipTM=0.135 tol=4.48
2024-07-27 09:55:07,926 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47 pTM=0.315 ipTM=0.135 tol=5.97
2024-07-27 09:55:12,813 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.7 pTM=0.313 ipTM=0.129 tol=4.14
2024-07-27 09:55:17,704 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.8 pTM=0.314 ipTM=0.157 tol=5.07
2024-07-27 09:55:22,587 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.2 pTM=0.31 ipTM=0.125 tol=6.09
2024-07-27 09:55:27,465 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.2 pTM=0.313 ipTM=0.159 tol=6.73
2024-07-27 09:55:32,358 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47 pTM=0.314 ipTM=0.14 tol=8.46
2024-07-27 09:55:37,246 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.2 pTM=0.317 ipTM=0.148 tol=3.87
2024-07-27 09:55:42,135 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.9 pTM=0.314 ipTM=0.137 tol=3.1
2024-07-27 09:55:47,010 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47 pTM=0.315 ipTM=0.138 tol=2.82
2024-07-27 09:55:51,889 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.6 pTM=0.317 ipTM=0.132 tol=4.2
2024-07-27 09:55:56,768 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.3 pTM=0.316 ipTM=0.14 tol=6.04
2024-07-27 09:56:01,648 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.1 pTM=0.316 ipTM=0.132 tol=4.68
2024-07-27 09:56:06,523 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.9 pTM=0.316 ipTM=0.133 tol=2.96
2024-07-27 09:56:11,407 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.3 pTM=0.315 ipTM=0.145 tol=3.73
2024-07-27 09:56:16,283 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.7 pTM=0.313 ipTM=0.135 tol=2.13
2024-07-27 09:56:21,163 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47 pTM=0.314 ipTM=0.135 tol=2.68
2024-07-27 09:56:26,040 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.2 pTM=0.316 ipTM=0.149 tol=2.76
2024-07-27 09:56:30,923 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46.4 pTM=0.314 ipTM=0.129 tol=3.81
2024-07-27 09:56:35,798 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.5 pTM=0.314 ipTM=0.137 tol=5.38
2024-07-27 09:56:40,681 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47 pTM=0.312 ipTM=0.132 tol=2.74
2024-07-27 09:56:45,559 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47 pTM=0.314 ipTM=0.141 tol=1.66
2024-07-27 09:56:50,431 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=46.8 pTM=0.312 ipTM=0.132 tol=2.7
2024-07-27 09:56:55,312 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.8 pTM=0.315 ipTM=0.145 tol=2.28
2024-07-27 09:57:00,189 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.2 pTM=0.312 ipTM=0.127 tol=4.6
2024-07-27 09:57:00,190 alphafold2_multimer_v3_model_2_seed_000 took 151.3s (30 recycles)
2024-07-27 09:57:05,221 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45 pTM=0.308 ipTM=0.16
2024-07-27 09:57:10,115 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.4 pTM=0.312 ipTM=0.237 tol=16.1
2024-07-27 09:57:15,007 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.2 pTM=0.314 ipTM=0.248 tol=8.12
2024-07-27 09:57:19,890 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.9 pTM=0.312 ipTM=0.203 tol=4.18
2024-07-27 09:57:24,785 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.3 pTM=0.312 ipTM=0.227 tol=4.39
2024-07-27 09:57:29,664 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47 pTM=0.312 ipTM=0.214 tol=6.46
2024-07-27 09:57:34,545 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.1 pTM=0.314 ipTM=0.205 tol=5.5
2024-07-27 09:57:39,423 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47 pTM=0.312 ipTM=0.235 tol=4.98
2024-07-27 09:57:44,318 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.7 pTM=0.313 ipTM=0.209 tol=3.89
2024-07-27 09:57:49,201 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.1 pTM=0.327 ipTM=0.254 tol=9.72
2024-07-27 09:57:54,094 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.4 pTM=0.32 ipTM=0.239 tol=3.42
2024-07-27 09:57:58,968 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.6 pTM=0.336 ipTM=0.293 tol=4.14
2024-07-27 09:58:03,849 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.2 pTM=0.328 ipTM=0.226 tol=4.26
2024-07-27 09:58:08,726 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50 pTM=0.337 ipTM=0.295 tol=4.84
2024-07-27 09:58:13,608 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.8 pTM=0.33 ipTM=0.232 tol=3.56
2024-07-27 09:58:18,485 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.5 pTM=0.341 ipTM=0.305 tol=3.13
2024-07-27 09:58:23,362 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.2 pTM=0.344 ipTM=0.287 tol=2.83
2024-07-27 09:58:28,240 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.8 pTM=0.344 ipTM=0.323 tol=3.36
2024-07-27 09:58:33,123 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.5 pTM=0.351 ipTM=0.33 tol=3.72
2024-07-27 09:58:37,996 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50 pTM=0.348 ipTM=0.327 tol=3.36
2024-07-27 09:58:42,880 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.9 pTM=0.345 ipTM=0.312 tol=2.15
2024-07-27 09:58:47,753 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.4 pTM=0.344 ipTM=0.317 tol=3.08
2024-07-27 09:58:52,635 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.9 pTM=0.343 ipTM=0.311 tol=2.39
2024-07-27 09:58:57,512 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.1 pTM=0.346 ipTM=0.314 tol=2.26
2024-07-27 09:59:02,392 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.4 pTM=0.351 ipTM=0.336 tol=3.87
2024-07-27 09:59:07,273 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.3 pTM=0.353 ipTM=0.337 tol=3.43
2024-07-27 09:59:12,151 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.9 pTM=0.344 ipTM=0.325 tol=0.793
2024-07-27 09:59:17,023 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.1 pTM=0.344 ipTM=0.329 tol=1.88
2024-07-27 09:59:21,905 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.3 pTM=0.342 ipTM=0.318 tol=1.85
2024-07-27 09:59:26,782 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.9 pTM=0.349 ipTM=0.337 tol=3.29
2024-07-27 09:59:31,662 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49 pTM=0.347 ipTM=0.327 tol=4.11
2024-07-27 09:59:31,663 alphafold2_multimer_v3_model_3_seed_000 took 151.3s (30 recycles)
2024-07-27 09:59:36,701 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.1 pTM=0.32 ipTM=0.208
2024-07-27 09:59:41,581 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45 pTM=0.329 ipTM=0.166 tol=14.8
2024-07-27 09:59:46,460 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.3 pTM=0.323 ipTM=0.204 tol=11.5
2024-07-27 09:59:51,339 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.3 pTM=0.316 ipTM=0.229 tol=6.36
2024-07-27 09:59:56,213 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.1 pTM=0.314 ipTM=0.25 tol=6.03
2024-07-27 10:00:01,095 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.7 pTM=0.319 ipTM=0.179 tol=5.46
2024-07-27 10:00:05,975 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.6 pTM=0.319 ipTM=0.152 tol=3.72
2024-07-27 10:00:10,846 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47 pTM=0.325 ipTM=0.172 tol=5.81
2024-07-27 10:00:15,728 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.1 pTM=0.318 ipTM=0.179 tol=3.47
2024-07-27 10:00:20,609 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.4 pTM=0.322 ipTM=0.181 tol=4.66
2024-07-27 10:00:25,486 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.5 pTM=0.322 ipTM=0.151 tol=4.84
2024-07-27 10:00:30,360 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.4 pTM=0.325 ipTM=0.147 tol=6.15
2024-07-27 10:00:35,239 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.9 pTM=0.345 ipTM=0.296 tol=5.24
2024-07-27 10:00:40,117 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.4 pTM=0.338 ipTM=0.213 tol=2.87
2024-07-27 10:00:44,996 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.8 pTM=0.335 ipTM=0.178 tol=3.35
2024-07-27 10:00:49,874 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.8 pTM=0.346 ipTM=0.247 tol=3.66
2024-07-27 10:00:54,763 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.6 pTM=0.327 ipTM=0.164 tol=8.34
2024-07-27 10:00:59,647 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.2 pTM=0.338 ipTM=0.175 tol=8.77
2024-07-27 10:01:04,537 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.4 pTM=0.329 ipTM=0.151 tol=6.86
2024-07-27 10:01:09,407 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.3 pTM=0.347 ipTM=0.194 tol=5.99
2024-07-27 10:01:14,291 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.5 pTM=0.338 ipTM=0.213 tol=6.44
2024-07-27 10:01:19,167 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=45.8 pTM=0.343 ipTM=0.184 tol=7.58
2024-07-27 10:01:24,053 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.9 pTM=0.325 ipTM=0.145 tol=7.89
2024-07-27 10:01:28,930 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.2 pTM=0.336 ipTM=0.176 tol=8.07
2024-07-27 10:01:33,804 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.5 pTM=0.342 ipTM=0.268 tol=4.16
2024-07-27 10:01:38,683 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.5 pTM=0.336 ipTM=0.186 tol=6.31
2024-07-27 10:01:43,568 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.9 pTM=0.325 ipTM=0.167 tol=6.32
2024-07-27 10:01:48,459 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.7 pTM=0.343 ipTM=0.184 tol=6.12
2024-07-27 10:01:53,339 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.2 pTM=0.33 ipTM=0.163 tol=6.61
2024-07-27 10:01:58,217 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.6 pTM=0.345 ipTM=0.205 tol=4.76
2024-07-27 10:02:03,103 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.5 pTM=0.33 ipTM=0.159 tol=5.3
2024-07-27 10:02:03,103 alphafold2_multimer_v3_model_4_seed_000 took 151.3s (30 recycles)
2024-07-27 10:02:08,148 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.2 pTM=0.309 ipTM=0.185
2024-07-27 10:02:13,047 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.4 pTM=0.311 ipTM=0.132 tol=14.6
2024-07-27 10:02:17,955 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.1 pTM=0.302 ipTM=0.11 tol=18.9
2024-07-27 10:02:22,840 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.5 pTM=0.308 ipTM=0.161 tol=13.2
2024-07-27 10:02:27,740 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.4 pTM=0.307 ipTM=0.131 tol=7.54
2024-07-27 10:02:32,644 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.2 pTM=0.309 ipTM=0.125 tol=6.34
2024-07-27 10:02:37,543 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.6 pTM=0.31 ipTM=0.24 tol=6.62
2024-07-27 10:02:42,442 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.8 pTM=0.306 ipTM=0.13 tol=7.55
2024-07-27 10:02:47,343 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.4 pTM=0.305 ipTM=0.126 tol=6.61
2024-07-27 10:02:52,241 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.2 pTM=0.307 ipTM=0.144 tol=7.71
2024-07-27 10:02:57,139 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.7 pTM=0.305 ipTM=0.127 tol=5.14
2024-07-27 10:03:02,034 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.2 pTM=0.304 ipTM=0.117 tol=4.88
2024-07-27 10:03:06,936 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.2 pTM=0.303 ipTM=0.116 tol=8.8
2024-07-27 10:03:11,832 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.9 pTM=0.307 ipTM=0.128 tol=8.78
2024-07-27 10:03:16,726 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.5 pTM=0.307 ipTM=0.123 tol=13.3
2024-07-27 10:03:21,629 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.9 pTM=0.305 ipTM=0.123 tol=6.87
2024-07-27 10:03:26,525 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.9 pTM=0.307 ipTM=0.152 tol=9.86
2024-07-27 10:03:31,425 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.5 pTM=0.303 ipTM=0.115 tol=5.71
2024-07-27 10:03:36,325 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.4 pTM=0.305 ipTM=0.124 tol=7.77
2024-07-27 10:03:41,217 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.2 pTM=0.308 ipTM=0.293 tol=8.57
2024-07-27 10:03:46,117 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.2 pTM=0.306 ipTM=0.161 tol=5.87
2024-07-27 10:03:51,015 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.2 pTM=0.306 ipTM=0.18 tol=6.52
2024-07-27 10:03:55,917 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.9 pTM=0.304 ipTM=0.138 tol=4.88
2024-07-27 10:04:00,813 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48 pTM=0.305 ipTM=0.158 tol=7.86
2024-07-27 10:04:05,711 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.2 pTM=0.305 ipTM=0.151 tol=8.3
2024-07-27 10:04:10,611 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.2 pTM=0.308 ipTM=0.174 tol=10.8
2024-07-27 10:04:15,510 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.6 pTM=0.307 ipTM=0.214 tol=3.64
2024-07-27 10:04:20,406 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.9 pTM=0.303 ipTM=0.132 tol=9.22
2024-07-27 10:04:25,299 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.9 pTM=0.302 ipTM=0.143 tol=6.59
2024-07-27 10:04:30,191 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.1 pTM=0.302 ipTM=0.124 tol=8.66
2024-07-27 10:04:35,086 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.3 pTM=0.303 ipTM=0.13 tol=7.41
2024-07-27 10:04:35,087 alphafold2_multimer_v3_model_5_seed_000 took 151.8s (30 recycles)
2024-07-27 10:04:35,231 reranking models by 'multimer' metric
2024-07-27 10:04:38,105 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 10:05:01,856 Relaxation took 26.6s
2024-07-27 10:05:01,856 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49 pTM=0.347 ipTM=0.327
2024-07-27 10:05:28,636 Relaxation took 26.8s
2024-07-27 10:05:28,636 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.6 pTM=0.321 ipTM=0.259
2024-07-27 10:05:55,650 Relaxation took 27.0s
2024-07-27 10:05:55,651 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.5 pTM=0.33 ipTM=0.159
2024-07-27 10:06:15,162 Relaxation took 19.5s
2024-07-27 10:06:15,162 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.3 pTM=0.303 ipTM=0.13
2024-07-27 10:06:36,266 Relaxation took 21.1s
2024-07-27 10:06:36,267 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.2 pTM=0.312 ipTM=0.127
2024-07-27 10:06:37,259 Done