2024-07-27 09:50:12,184 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 09:50:12,488 Running on GPU
2024-07-27 09:50:16,011 Found 6 citations for tools or databases
2024-07-27 09:50:16,011 Query 1/1: RNF4_KCTD6 (length 428)
2024-07-27 09:50:16,457 Sleeping for 6s. Reason: PENDING
2024-07-27 09:50:22,876 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:50:33,298 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:50:38,715 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:50:48,135 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:50:55,545 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:51:00,969 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:51:09,417 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:51:16,844 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:51:22,250 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:51:34,407 Sleeping for 7s. Reason: PENDING
2024-07-27 09:51:41,827 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:51:50,260 Sleeping for 6s. Reason: RUNNING
2024-07-27 09:51:56,720 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:52:04,174 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:52:09,611 Sleeping for 7s. Reason: RUNNING
2024-07-27 09:52:17,037 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:52:29,583 Setting max_seq=508, max_extra_seq=2048
2024-07-27 09:55:09,483 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.5 pTM=0.325 ipTM=0.132
2024-07-27 09:55:13,912 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.1 pTM=0.308 ipTM=0.124 tol=10
2024-07-27 09:55:18,343 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.1 pTM=0.432 ipTM=0.432 tol=11.3
2024-07-27 09:55:22,773 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.4 pTM=0.433 ipTM=0.409 tol=5.82
2024-07-27 09:55:27,200 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.8 pTM=0.437 ipTM=0.416 tol=4.55
2024-07-27 09:55:31,629 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.2 pTM=0.447 ipTM=0.44 tol=3.59
2024-07-27 09:55:36,056 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62 pTM=0.445 ipTM=0.44 tol=2.73
2024-07-27 09:55:40,483 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.8 pTM=0.443 ipTM=0.419 tol=2
2024-07-27 09:55:44,912 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.2 pTM=0.433 ipTM=0.389 tol=1.97
2024-07-27 09:55:49,349 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.2 pTM=0.449 ipTM=0.439 tol=1.3
2024-07-27 09:55:53,780 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.1 pTM=0.435 ipTM=0.395 tol=1.68
2024-07-27 09:55:58,212 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.2 pTM=0.441 ipTM=0.419 tol=2.08
2024-07-27 09:56:02,646 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.1 pTM=0.427 ipTM=0.37 tol=2.1
2024-07-27 09:56:07,079 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.7 pTM=0.443 ipTM=0.426 tol=2.55
2024-07-27 09:56:11,514 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.5 pTM=0.419 ipTM=0.361 tol=3.22
2024-07-27 09:56:15,949 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.2 pTM=0.446 ipTM=0.433 tol=2.98
2024-07-27 09:56:20,377 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.5 pTM=0.423 ipTM=0.359 tol=1.85
2024-07-27 09:56:24,806 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.3 pTM=0.435 ipTM=0.406 tol=2.15
2024-07-27 09:56:29,236 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.7 pTM=0.426 ipTM=0.366 tol=1.5
2024-07-27 09:56:33,662 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.5 pTM=0.43 ipTM=0.389 tol=2.19
2024-07-27 09:56:38,091 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.6 pTM=0.421 ipTM=0.354 tol=1.42
2024-07-27 09:56:42,520 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.8 pTM=0.44 ipTM=0.417 tol=2.15
2024-07-27 09:56:46,950 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.419 ipTM=0.349 tol=2.25
2024-07-27 09:56:51,383 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.6 pTM=0.441 ipTM=0.43 tol=2.27
2024-07-27 09:56:55,816 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.2 pTM=0.433 ipTM=0.389 tol=3.78
2024-07-27 09:57:00,248 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.4 pTM=0.439 ipTM=0.419 tol=3.55
2024-07-27 09:57:04,680 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.1 pTM=0.423 ipTM=0.364 tol=2.3
2024-07-27 09:57:09,115 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.9 pTM=0.448 ipTM=0.44 tol=3.13
2024-07-27 09:57:13,545 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.3 pTM=0.438 ipTM=0.411 tol=2.24
2024-07-27 09:57:17,974 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.3 pTM=0.433 ipTM=0.396 tol=1.99
2024-07-27 09:57:22,405 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.4 pTM=0.417 ipTM=0.362 tol=2.12
2024-07-27 09:57:22,406 alphafold2_multimer_v3_model_1_seed_000 took 287.6s (30 recycles)
2024-07-27 09:57:26,966 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.4 pTM=0.342 ipTM=0.192
2024-07-27 09:57:31,401 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.3 pTM=0.418 ipTM=0.458 tol=13.3
2024-07-27 09:57:35,840 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.2 pTM=0.446 ipTM=0.489 tol=13.3
2024-07-27 09:57:40,283 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62 pTM=0.451 ipTM=0.505 tol=10.7
2024-07-27 09:57:44,730 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.9 pTM=0.455 ipTM=0.513 tol=5.32
2024-07-27 09:57:49,177 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.1 pTM=0.456 ipTM=0.514 tol=3.97
2024-07-27 09:57:53,627 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.1 pTM=0.456 ipTM=0.517 tol=2.24
2024-07-27 09:57:58,079 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.4 pTM=0.459 ipTM=0.52 tol=2.87
2024-07-27 09:58:02,533 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.2 pTM=0.459 ipTM=0.521 tol=3.69
2024-07-27 09:58:06,986 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.4 pTM=0.461 ipTM=0.52 tol=4.51
2024-07-27 09:58:11,438 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.8 pTM=0.458 ipTM=0.516 tol=2.04
2024-07-27 09:58:15,890 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.5 pTM=0.46 ipTM=0.522 tol=3.28
2024-07-27 09:58:20,344 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.6 pTM=0.461 ipTM=0.523 tol=3.7
2024-07-27 09:58:24,795 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.2 pTM=0.461 ipTM=0.523 tol=3.01
2024-07-27 09:58:29,248 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.4 pTM=0.459 ipTM=0.52 tol=2.92
2024-07-27 09:58:33,707 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.4 pTM=0.46 ipTM=0.524 tol=3.23
2024-07-27 09:58:38,159 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.2 pTM=0.46 ipTM=0.523 tol=1.33
2024-07-27 09:58:42,611 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.5 pTM=0.46 ipTM=0.523 tol=1.31
2024-07-27 09:58:47,065 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.3 pTM=0.459 ipTM=0.519 tol=2.09
2024-07-27 09:58:51,509 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.4 pTM=0.458 ipTM=0.52 tol=1.84
2024-07-27 09:58:55,956 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.2 pTM=0.458 ipTM=0.522 tol=0.969
2024-07-27 09:59:00,403 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.1 pTM=0.458 ipTM=0.521 tol=2.15
2024-07-27 09:59:04,853 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.1 pTM=0.456 ipTM=0.519 tol=2.84
2024-07-27 09:59:09,298 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.1 pTM=0.457 ipTM=0.521 tol=1.12
2024-07-27 09:59:13,744 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.2 pTM=0.456 ipTM=0.519 tol=1.14
2024-07-27 09:59:18,190 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.2 pTM=0.457 ipTM=0.52 tol=1.41
2024-07-27 09:59:22,636 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.1 pTM=0.455 ipTM=0.519 tol=1.95
2024-07-27 09:59:27,084 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.456 ipTM=0.521 tol=3.16
2024-07-27 09:59:31,526 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.6 pTM=0.454 ipTM=0.516 tol=1.84
2024-07-27 09:59:35,968 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63 pTM=0.456 ipTM=0.52 tol=2.86
2024-07-27 09:59:40,417 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.1 pTM=0.455 ipTM=0.52 tol=3.56
2024-07-27 09:59:40,417 alphafold2_multimer_v3_model_2_seed_000 took 137.9s (30 recycles)
2024-07-27 09:59:44,979 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.3 pTM=0.387 ipTM=0.352
2024-07-27 09:59:49,420 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.6 pTM=0.412 ipTM=0.445 tol=13.3
2024-07-27 09:59:53,851 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.9 pTM=0.44 ipTM=0.469 tol=9.77
2024-07-27 09:59:58,285 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.7 pTM=0.436 ipTM=0.45 tol=7.07
2024-07-27 10:00:02,724 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.6 pTM=0.432 ipTM=0.449 tol=1.86
2024-07-27 10:00:07,160 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61 pTM=0.438 ipTM=0.466 tol=1.85
2024-07-27 10:00:11,598 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.7 pTM=0.432 ipTM=0.455 tol=1.65
2024-07-27 10:00:16,038 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.4 pTM=0.44 ipTM=0.468 tol=3.94
2024-07-27 10:00:20,476 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.5 pTM=0.438 ipTM=0.468 tol=2.31
2024-07-27 10:00:24,915 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.4 pTM=0.439 ipTM=0.469 tol=2.96
2024-07-27 10:00:29,355 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.6 pTM=0.431 ipTM=0.448 tol=3.09
2024-07-27 10:00:33,800 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.1 pTM=0.436 ipTM=0.458 tol=1.61
2024-07-27 10:00:38,259 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.3 pTM=0.435 ipTM=0.458 tol=3.08
2024-07-27 10:00:42,699 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.8 pTM=0.436 ipTM=0.455 tol=2.67
2024-07-27 10:00:47,137 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.2 pTM=0.428 ipTM=0.437 tol=1.86
2024-07-27 10:00:51,574 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.9 pTM=0.433 ipTM=0.449 tol=1.95
2024-07-27 10:00:56,010 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.1 pTM=0.429 ipTM=0.431 tol=2.07
2024-07-27 10:01:00,445 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.1 pTM=0.434 ipTM=0.443 tol=2.81
2024-07-27 10:01:04,881 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.6 pTM=0.425 ipTM=0.419 tol=2.49
2024-07-27 10:01:09,312 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.9 pTM=0.417 ipTM=0.402 tol=2.41
2024-07-27 10:01:13,747 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.7 pTM=0.416 ipTM=0.396 tol=3.1
2024-07-27 10:01:18,175 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.1 pTM=0.423 ipTM=0.409 tol=5.11
2024-07-27 10:01:22,606 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.2 pTM=0.421 ipTM=0.408 tol=4.55
2024-07-27 10:01:27,038 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.4 pTM=0.424 ipTM=0.42 tol=3.67
2024-07-27 10:01:31,469 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.9 pTM=0.423 ipTM=0.416 tol=3.23
2024-07-27 10:01:35,897 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61 pTM=0.432 ipTM=0.429 tol=3.19
2024-07-27 10:01:40,328 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61 pTM=0.429 ipTM=0.422 tol=2.13
2024-07-27 10:01:44,754 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.8 pTM=0.429 ipTM=0.427 tol=2.11
2024-07-27 10:01:49,180 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.6 pTM=0.424 ipTM=0.401 tol=3.18
2024-07-27 10:01:53,605 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.1 pTM=0.434 ipTM=0.426 tol=2.25
2024-07-27 10:01:58,029 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60 pTM=0.424 ipTM=0.403 tol=1.27
2024-07-27 10:01:58,030 alphafold2_multimer_v3_model_3_seed_000 took 137.5s (30 recycles)
2024-07-27 10:02:02,583 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.9 pTM=0.325 ipTM=0.196
2024-07-27 10:02:07,016 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.8 pTM=0.297 ipTM=0.122 tol=7.79
2024-07-27 10:02:11,447 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.4 pTM=0.347 ipTM=0.216 tol=13.1
2024-07-27 10:02:15,880 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53.4 pTM=0.318 ipTM=0.14 tol=6.14
2024-07-27 10:02:20,307 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.8 pTM=0.321 ipTM=0.147 tol=5.83
2024-07-27 10:02:24,728 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.3 pTM=0.317 ipTM=0.16 tol=5.2
2024-07-27 10:02:29,152 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.8 pTM=0.335 ipTM=0.148 tol=4.2
2024-07-27 10:02:33,578 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.2 pTM=0.326 ipTM=0.134 tol=5.49
2024-07-27 10:02:38,009 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.6 pTM=0.332 ipTM=0.124 tol=4.54
2024-07-27 10:02:42,433 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.9 pTM=0.322 ipTM=0.116 tol=4.67
2024-07-27 10:02:46,854 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.7 pTM=0.369 ipTM=0.24 tol=11.2
2024-07-27 10:02:51,279 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.7 pTM=0.338 ipTM=0.155 tol=7.58
2024-07-27 10:02:55,706 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.8 pTM=0.348 ipTM=0.138 tol=4.86
2024-07-27 10:03:00,138 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56 pTM=0.353 ipTM=0.165 tol=4.88
2024-07-27 10:03:04,575 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.8 pTM=0.339 ipTM=0.128 tol=7.28
2024-07-27 10:03:09,012 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.1 pTM=0.342 ipTM=0.128 tol=7.62
2024-07-27 10:03:13,458 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.3 pTM=0.349 ipTM=0.131 tol=6.18
2024-07-27 10:03:17,896 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56 pTM=0.341 ipTM=0.137 tol=5.46
2024-07-27 10:03:22,331 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.2 pTM=0.341 ipTM=0.129 tol=5.81
2024-07-27 10:03:26,765 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.6 pTM=0.342 ipTM=0.146 tol=8.62
2024-07-27 10:03:31,214 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.3 pTM=0.347 ipTM=0.127 tol=6.34
2024-07-27 10:03:35,649 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.8 pTM=0.346 ipTM=0.142 tol=8.57
2024-07-27 10:03:40,084 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.9 pTM=0.344 ipTM=0.12 tol=9.48
2024-07-27 10:03:44,528 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56 pTM=0.352 ipTM=0.154 tol=6.93
2024-07-27 10:03:48,984 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=54.9 pTM=0.347 ipTM=0.143 tol=3.96
2024-07-27 10:03:53,425 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.4 pTM=0.342 ipTM=0.137 tol=4.28
2024-07-27 10:03:57,861 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.1 pTM=0.345 ipTM=0.124 tol=4.93
2024-07-27 10:04:02,297 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.2 pTM=0.351 ipTM=0.129 tol=3.5
2024-07-27 10:04:06,744 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.5 pTM=0.349 ipTM=0.131 tol=3.9
2024-07-27 10:04:11,189 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55 pTM=0.351 ipTM=0.131 tol=8.94
2024-07-27 10:04:15,624 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.9 pTM=0.344 ipTM=0.122 tol=6.81
2024-07-27 10:04:15,625 alphafold2_multimer_v3_model_4_seed_000 took 137.5s (30 recycles)
2024-07-27 10:04:20,192 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.3 pTM=0.41 ipTM=0.404
2024-07-27 10:04:24,675 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.7 pTM=0.423 ipTM=0.458 tol=7.54
2024-07-27 10:04:29,114 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.7 pTM=0.417 ipTM=0.451 tol=6.16
2024-07-27 10:04:33,548 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.6 pTM=0.432 ipTM=0.472 tol=5.81
2024-07-27 10:04:38,003 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.4 pTM=0.433 ipTM=0.472 tol=4.74
2024-07-27 10:04:42,451 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.2 pTM=0.441 ipTM=0.486 tol=2.47
2024-07-27 10:04:46,894 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.9 pTM=0.441 ipTM=0.49 tol=2.32
2024-07-27 10:04:51,344 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.6 pTM=0.44 ipTM=0.485 tol=4
2024-07-27 10:04:55,787 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.4 pTM=0.446 ipTM=0.499 tol=2.58
2024-07-27 10:05:00,231 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.7 pTM=0.445 ipTM=0.496 tol=3.86
2024-07-27 10:05:04,680 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.8 pTM=0.449 ipTM=0.501 tol=3.04
2024-07-27 10:05:09,123 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.8 pTM=0.446 ipTM=0.497 tol=2.24
2024-07-27 10:05:13,567 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.6 pTM=0.446 ipTM=0.499 tol=1.43
2024-07-27 10:05:18,016 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.2 pTM=0.444 ipTM=0.492 tol=2.84
2024-07-27 10:05:22,461 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.1 pTM=0.448 ipTM=0.498 tol=3.72
2024-07-27 10:05:26,897 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.5 pTM=0.446 ipTM=0.495 tol=2.36
2024-07-27 10:05:31,334 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.1 pTM=0.444 ipTM=0.492 tol=1.74
2024-07-27 10:05:35,783 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.4 pTM=0.443 ipTM=0.491 tol=1.19
2024-07-27 10:05:40,225 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.2 pTM=0.448 ipTM=0.498 tol=1.69
2024-07-27 10:05:44,658 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.3 pTM=0.443 ipTM=0.49 tol=1.69
2024-07-27 10:05:49,101 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.6 pTM=0.446 ipTM=0.498 tol=0.823
2024-07-27 10:05:53,555 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.3 pTM=0.442 ipTM=0.492 tol=0.734
2024-07-27 10:05:58,007 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.9 pTM=0.447 ipTM=0.503 tol=3.72
2024-07-27 10:06:02,453 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.4 pTM=0.445 ipTM=0.499 tol=3.56
2024-07-27 10:06:06,899 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.6 pTM=0.448 ipTM=0.506 tol=1.84
2024-07-27 10:06:11,372 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.1 pTM=0.445 ipTM=0.496 tol=2.29
2024-07-27 10:06:15,814 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.9 pTM=0.449 ipTM=0.505 tol=1.65
2024-07-27 10:06:20,253 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.4 pTM=0.447 ipTM=0.499 tol=1.61
2024-07-27 10:06:24,686 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61 pTM=0.445 ipTM=0.497 tol=1.98
2024-07-27 10:06:29,116 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.7 pTM=0.443 ipTM=0.491 tol=1.7
2024-07-27 10:06:33,554 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.6 pTM=0.447 ipTM=0.5 tol=2.92
2024-07-27 10:06:33,555 alphafold2_multimer_v3_model_5_seed_000 took 137.8s (30 recycles)
2024-07-27 10:06:33,687 reranking models by 'multimer' metric
2024-07-27 10:06:35,068 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 10:07:01,140 Relaxation took 27.5s
2024-07-27 10:07:01,140 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.1 pTM=0.455 ipTM=0.52
2024-07-27 10:07:27,119 Relaxation took 26.0s
2024-07-27 10:07:27,119 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.6 pTM=0.447 ipTM=0.5
2024-07-27 10:07:48,940 Relaxation took 21.8s
2024-07-27 10:07:48,940 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60 pTM=0.424 ipTM=0.403
2024-07-27 10:08:12,772 Relaxation took 23.8s
2024-07-27 10:08:12,773 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.4 pTM=0.417 ipTM=0.362
2024-07-27 10:08:32,772 Relaxation took 20.0s
2024-07-27 10:08:32,772 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.9 pTM=0.344 ipTM=0.122
2024-07-27 10:08:33,791 Done