2024-07-27 09:58:49,707 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 09:58:50,029 Running on GPU
2024-07-27 09:58:52,668 Found 6 citations for tools or databases
2024-07-27 09:58:52,668 Query 1/1: RNF4_RNF7 (length 304)
2024-07-27 09:58:53,112 Sleeping for 9s. Reason: PENDING
2024-07-27 09:59:02,549 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:59:10,988 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:59:16,432 Sleeping for 5s. Reason: RUNNING
2024-07-27 09:59:21,861 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:59:31,273 Sleeping for 10s. Reason: RUNNING
2024-07-27 09:59:41,707 Sleeping for 9s. Reason: RUNNING
2024-07-27 09:59:51,124 Sleeping for 8s. Reason: RUNNING
2024-07-27 09:59:59,561 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:00:05,004 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:00:13,094 Sleeping for 10s. Reason: PENDING
2024-07-27 10:00:23,515 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:00:32,932 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:00:39,371 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:00:51,734 Setting max_seq=508, max_extra_seq=2048
2024-07-27 10:03:06,367 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.1 pTM=0.259 ipTM=0.111
2024-07-27 10:03:09,148 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43 pTM=0.259 ipTM=0.101 tol=15.3
2024-07-27 10:03:11,928 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46 pTM=0.274 ipTM=0.129 tol=13.6
2024-07-27 10:03:14,704 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.4 pTM=0.272 ipTM=0.122 tol=5.86
2024-07-27 10:03:17,482 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.4 pTM=0.278 ipTM=0.136 tol=4.99
2024-07-27 10:03:20,259 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.2 pTM=0.279 ipTM=0.13 tol=4.95
2024-07-27 10:03:23,042 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.7 pTM=0.284 ipTM=0.144 tol=3.11
2024-07-27 10:03:25,822 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.4 pTM=0.276 ipTM=0.121 tol=3.17
2024-07-27 10:03:28,601 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.4 pTM=0.286 ipTM=0.149 tol=4.69
2024-07-27 10:03:31,382 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.6 pTM=0.272 ipTM=0.108 tol=4.2
2024-07-27 10:03:34,167 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50 pTM=0.287 ipTM=0.145 tol=3.66
2024-07-27 10:03:36,948 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.1 pTM=0.273 ipTM=0.107 tol=1.88
2024-07-27 10:03:39,731 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50 pTM=0.282 ipTM=0.137 tol=2.81
2024-07-27 10:03:42,513 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.3 pTM=0.273 ipTM=0.109 tol=2.47
2024-07-27 10:03:45,295 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.7 pTM=0.282 ipTM=0.138 tol=4.81
2024-07-27 10:03:48,076 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.9 pTM=0.274 ipTM=0.109 tol=4.14
2024-07-27 10:03:50,857 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.2 pTM=0.284 ipTM=0.142 tol=3.23
2024-07-27 10:03:53,638 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.9 pTM=0.274 ipTM=0.113 tol=1.8
2024-07-27 10:03:56,421 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50 pTM=0.285 ipTM=0.143 tol=1.77
2024-07-27 10:03:59,203 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.6 pTM=0.272 ipTM=0.109 tol=3.95
2024-07-27 10:04:01,984 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.4 pTM=0.284 ipTM=0.143 tol=2.38
2024-07-27 10:04:04,765 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.1 pTM=0.273 ipTM=0.112 tol=1.4
2024-07-27 10:04:07,544 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.4 pTM=0.28 ipTM=0.135 tol=2.49
2024-07-27 10:04:10,322 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.8 pTM=0.273 ipTM=0.109 tol=3.39
2024-07-27 10:04:13,104 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.5 pTM=0.281 ipTM=0.135 tol=4.25
2024-07-27 10:04:15,883 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.9 pTM=0.273 ipTM=0.107 tol=4.05
2024-07-27 10:04:18,660 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.7 pTM=0.28 ipTM=0.129 tol=2.95
2024-07-27 10:04:21,438 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.2 pTM=0.274 ipTM=0.114 tol=2.43
2024-07-27 10:04:24,216 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.7 pTM=0.283 ipTM=0.139 tol=2.38
2024-07-27 10:04:26,997 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.8 pTM=0.274 ipTM=0.111 tol=2.33
2024-07-27 10:04:29,778 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.3 pTM=0.282 ipTM=0.136 tol=2.01
2024-07-27 10:04:29,778 alphafold2_multimer_v3_model_1_seed_000 took 213.7s (30 recycles)
2024-07-27 10:04:32,632 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.3 pTM=0.274 ipTM=0.108
2024-07-27 10:04:35,407 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.4 pTM=0.28 ipTM=0.11 tol=14.2
2024-07-27 10:04:38,184 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.4 pTM=0.288 ipTM=0.122 tol=8.67
2024-07-27 10:04:40,961 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.1 pTM=0.287 ipTM=0.124 tol=5.22
2024-07-27 10:04:43,740 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48 pTM=0.289 ipTM=0.126 tol=1.96
2024-07-27 10:04:46,515 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.7 pTM=0.289 ipTM=0.128 tol=3.58
2024-07-27 10:04:49,289 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48 pTM=0.288 ipTM=0.125 tol=2.06
2024-07-27 10:04:52,067 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.3 pTM=0.292 ipTM=0.134 tol=1.71
2024-07-27 10:04:54,855 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.4 pTM=0.292 ipTM=0.131 tol=1.96
2024-07-27 10:04:57,633 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.6 pTM=0.29 ipTM=0.128 tol=2.27
2024-07-27 10:05:00,410 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.3 pTM=0.291 ipTM=0.13 tol=3.51
2024-07-27 10:05:03,186 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.1 pTM=0.288 ipTM=0.127 tol=0.9
2024-07-27 10:05:05,962 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.9 pTM=0.292 ipTM=0.134 tol=1.79
2024-07-27 10:05:08,737 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.293 ipTM=0.139 tol=1.17
2024-07-27 10:05:11,511 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.5 pTM=0.294 ipTM=0.141 tol=1.49
2024-07-27 10:05:14,286 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.2 pTM=0.294 ipTM=0.141 tol=1.6
2024-07-27 10:05:17,065 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.5 pTM=0.292 ipTM=0.136 tol=1.43
2024-07-27 10:05:19,842 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.9 pTM=0.291 ipTM=0.139 tol=1.31
2024-07-27 10:05:22,627 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.5 pTM=0.294 ipTM=0.146 tol=1.69
2024-07-27 10:05:25,404 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.2 pTM=0.293 ipTM=0.14 tol=1.14
2024-07-27 10:05:28,184 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.1 pTM=0.293 ipTM=0.139 tol=1.42
2024-07-27 10:05:30,960 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.9 pTM=0.291 ipTM=0.136 tol=2.07
2024-07-27 10:05:33,734 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.2 pTM=0.288 ipTM=0.131 tol=1.29
2024-07-27 10:05:36,508 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.8 pTM=0.287 ipTM=0.125 tol=1.32
2024-07-27 10:05:39,282 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48 pTM=0.289 ipTM=0.129 tol=1.92
2024-07-27 10:05:42,058 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.3 pTM=0.291 ipTM=0.131 tol=1.89
2024-07-27 10:05:44,840 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.2 pTM=0.29 ipTM=0.132 tol=1.29
2024-07-27 10:05:47,613 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.1 pTM=0.288 ipTM=0.131 tol=1.34
2024-07-27 10:05:50,396 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.8 pTM=0.289 ipTM=0.13 tol=1.55
2024-07-27 10:05:53,171 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.2 pTM=0.29 ipTM=0.133 tol=1.56
2024-07-27 10:05:55,952 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.2 pTM=0.289 ipTM=0.129 tol=1.56
2024-07-27 10:05:55,952 alphafold2_multimer_v3_model_2_seed_000 took 86.1s (30 recycles)
2024-07-27 10:05:58,816 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.8 pTM=0.274 ipTM=0.12
2024-07-27 10:06:01,598 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.8 pTM=0.291 ipTM=0.146 tol=11.5
2024-07-27 10:06:04,374 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.3 pTM=0.291 ipTM=0.137 tol=6.78
2024-07-27 10:06:07,152 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.5 pTM=0.301 ipTM=0.157 tol=3.8
2024-07-27 10:06:09,935 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.3 pTM=0.297 ipTM=0.146 tol=3.43
2024-07-27 10:06:12,712 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=44.9 pTM=0.304 ipTM=0.164 tol=2.45
2024-07-27 10:06:15,498 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=44.8 pTM=0.299 ipTM=0.149 tol=2.31
2024-07-27 10:06:18,274 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.1 pTM=0.305 ipTM=0.167 tol=2.3
2024-07-27 10:06:21,049 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44.4 pTM=0.296 ipTM=0.145 tol=3.92
2024-07-27 10:06:23,825 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.2 pTM=0.31 ipTM=0.172 tol=2.82
2024-07-27 10:06:26,610 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.2 pTM=0.301 ipTM=0.151 tol=4.18
2024-07-27 10:06:29,389 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.9 pTM=0.308 ipTM=0.167 tol=3.5
2024-07-27 10:06:32,176 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.6 pTM=0.303 ipTM=0.154 tol=3.41
2024-07-27 10:06:34,957 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.4 pTM=0.302 ipTM=0.158 tol=3.69
2024-07-27 10:06:37,743 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.6 pTM=0.305 ipTM=0.162 tol=6.63
2024-07-27 10:06:40,523 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.6 pTM=0.302 ipTM=0.153 tol=6.91
2024-07-27 10:06:43,303 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.9 pTM=0.301 ipTM=0.152 tol=3.01
2024-07-27 10:06:46,078 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.4 pTM=0.306 ipTM=0.161 tol=5.44
2024-07-27 10:06:48,856 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.7 pTM=0.304 ipTM=0.159 tol=4.37
2024-07-27 10:06:51,633 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.8 pTM=0.304 ipTM=0.16 tol=2
2024-07-27 10:06:54,411 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.6 pTM=0.303 ipTM=0.158 tol=2.49
2024-07-27 10:06:57,188 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.6 pTM=0.303 ipTM=0.155 tol=3.75
2024-07-27 10:06:59,965 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46 pTM=0.302 ipTM=0.154 tol=3.36
2024-07-27 10:07:02,738 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.4 pTM=0.306 ipTM=0.164 tol=1.72
2024-07-27 10:07:05,519 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45.8 pTM=0.302 ipTM=0.152 tol=2.91
2024-07-27 10:07:08,298 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.9 pTM=0.303 ipTM=0.156 tol=2.29
2024-07-27 10:07:11,074 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.2 pTM=0.302 ipTM=0.152 tol=2.39
2024-07-27 10:07:13,851 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.6 pTM=0.305 ipTM=0.16 tol=2.54
2024-07-27 10:07:16,630 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.4 pTM=0.305 ipTM=0.162 tol=3.78
2024-07-27 10:07:19,408 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46 pTM=0.308 ipTM=0.169 tol=2.59
2024-07-27 10:07:22,187 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.8 pTM=0.306 ipTM=0.167 tol=3.58
2024-07-27 10:07:22,187 alphafold2_multimer_v3_model_3_seed_000 took 86.2s (30 recycles)
2024-07-27 10:07:25,048 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.1 pTM=0.286 ipTM=0.163
2024-07-27 10:07:27,834 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47 pTM=0.271 ipTM=0.118 tol=8.56
2024-07-27 10:07:30,617 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.3 pTM=0.276 ipTM=0.12 tol=9.11
2024-07-27 10:07:33,405 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.4 pTM=0.29 ipTM=0.149 tol=8.02
2024-07-27 10:07:36,188 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.3 pTM=0.286 ipTM=0.126 tol=5.38
2024-07-27 10:07:38,970 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.3 pTM=0.289 ipTM=0.13 tol=7.17
2024-07-27 10:07:41,750 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.3 pTM=0.285 ipTM=0.12 tol=6.8
2024-07-27 10:07:44,532 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.6 pTM=0.289 ipTM=0.134 tol=2.06
2024-07-27 10:07:47,314 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.2 pTM=0.287 ipTM=0.125 tol=3.05
2024-07-27 10:07:50,096 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.7 pTM=0.287 ipTM=0.13 tol=5.07
2024-07-27 10:07:52,881 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.4 pTM=0.281 ipTM=0.11 tol=8.46
2024-07-27 10:07:55,660 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.4 pTM=0.283 ipTM=0.12 tol=1.62
2024-07-27 10:07:58,445 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.7 pTM=0.284 ipTM=0.116 tol=6.25
2024-07-27 10:08:01,227 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.1 pTM=0.28 ipTM=0.113 tol=7.62
2024-07-27 10:08:04,010 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.8 pTM=0.279 ipTM=0.104 tol=6.83
2024-07-27 10:08:06,793 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.3 pTM=0.28 ipTM=0.105 tol=7.33
2024-07-27 10:08:09,576 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.6 pTM=0.281 ipTM=0.107 tol=5.71
2024-07-27 10:08:12,360 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48 pTM=0.281 ipTM=0.107 tol=5.09
2024-07-27 10:08:15,144 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.3 pTM=0.281 ipTM=0.102 tol=2.67
2024-07-27 10:08:17,925 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.9 pTM=0.281 ipTM=0.104 tol=2.71
2024-07-27 10:08:20,710 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.8 pTM=0.281 ipTM=0.104 tol=2.24
2024-07-27 10:08:23,494 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.9 pTM=0.28 ipTM=0.103 tol=2.54
2024-07-27 10:08:26,278 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.1 pTM=0.277 ipTM=0.104 tol=4.41
2024-07-27 10:08:29,060 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.2 pTM=0.279 ipTM=0.105 tol=4.57
2024-07-27 10:08:31,844 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.9 pTM=0.28 ipTM=0.102 tol=9.39
2024-07-27 10:08:34,627 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48 pTM=0.279 ipTM=0.104 tol=2.55
2024-07-27 10:08:37,407 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.1 pTM=0.28 ipTM=0.107 tol=5.94
2024-07-27 10:08:40,191 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.3 pTM=0.281 ipTM=0.108 tol=6.34
2024-07-27 10:08:42,973 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.1 pTM=0.279 ipTM=0.104 tol=3.89
2024-07-27 10:08:45,757 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.5 pTM=0.277 ipTM=0.102 tol=2.08
2024-07-27 10:08:48,543 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.5 pTM=0.275 ipTM=0.1 tol=4.37
2024-07-27 10:08:48,543 alphafold2_multimer_v3_model_4_seed_000 took 86.3s (30 recycles)
2024-07-27 10:08:51,419 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.3 pTM=0.276 ipTM=0.142
2024-07-27 10:08:54,208 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.9 pTM=0.269 ipTM=0.113 tol=13.9
2024-07-27 10:08:56,998 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.8 pTM=0.264 ipTM=0.101 tol=7.45
2024-07-27 10:08:59,786 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.9 pTM=0.266 ipTM=0.0887 tol=16.1
2024-07-27 10:09:02,575 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.2 pTM=0.27 ipTM=0.0954 tol=4.94
2024-07-27 10:09:05,364 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.7 pTM=0.271 ipTM=0.0958 tol=4.34
2024-07-27 10:09:08,153 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.1 pTM=0.27 ipTM=0.0936 tol=2.72
2024-07-27 10:09:10,941 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.9 pTM=0.271 ipTM=0.0947 tol=2.87
2024-07-27 10:09:13,729 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.7 pTM=0.271 ipTM=0.0917 tol=3.54
2024-07-27 10:09:16,517 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.1 pTM=0.271 ipTM=0.0927 tol=2.76
2024-07-27 10:09:19,308 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47 pTM=0.275 ipTM=0.0972 tol=2.59
2024-07-27 10:09:22,096 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47 pTM=0.27 ipTM=0.0884 tol=5.27
2024-07-27 10:09:24,886 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47 pTM=0.272 ipTM=0.092 tol=4.8
2024-07-27 10:09:27,671 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.8 pTM=0.269 ipTM=0.0884 tol=7.2
2024-07-27 10:09:30,462 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.1 pTM=0.27 ipTM=0.0944 tol=7.05
2024-07-27 10:09:33,250 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.9 pTM=0.27 ipTM=0.0891 tol=6.81
2024-07-27 10:09:36,040 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.8 pTM=0.271 ipTM=0.0939 tol=2.93
2024-07-27 10:09:38,829 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.9 pTM=0.272 ipTM=0.0907 tol=6.34
2024-07-27 10:09:41,616 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.4 pTM=0.272 ipTM=0.0921 tol=3.98
2024-07-27 10:09:44,406 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.4 pTM=0.271 ipTM=0.0903 tol=6.48
2024-07-27 10:09:47,194 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.9 pTM=0.272 ipTM=0.0973 tol=6.1
2024-07-27 10:09:49,981 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.4 pTM=0.271 ipTM=0.0906 tol=3.5
2024-07-27 10:09:52,769 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.1 pTM=0.272 ipTM=0.0959 tol=3.5
2024-07-27 10:09:55,556 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47 pTM=0.273 ipTM=0.0939 tol=1.81
2024-07-27 10:09:58,346 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.3 pTM=0.273 ipTM=0.0904 tol=4.88
2024-07-27 10:10:01,134 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.8 pTM=0.269 ipTM=0.0898 tol=2.77
2024-07-27 10:10:03,923 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.8 pTM=0.27 ipTM=0.0959 tol=3.98
2024-07-27 10:10:06,711 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.271 ipTM=0.0905 tol=6.52
2024-07-27 10:10:09,500 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.8 pTM=0.273 ipTM=0.098 tol=6.38
2024-07-27 10:10:12,291 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.2 pTM=0.27 ipTM=0.0898 tol=6.03
2024-07-27 10:10:15,082 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47 pTM=0.272 ipTM=0.098 tol=6.16
2024-07-27 10:10:15,082 alphafold2_multimer_v3_model_5_seed_000 took 86.5s (30 recycles)
2024-07-27 10:10:15,159 reranking models by 'multimer' metric
2024-07-27 10:10:17,684 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 10:10:37,470 Relaxation took 22.3s
2024-07-27 10:10:37,470 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.8 pTM=0.306 ipTM=0.167
2024-07-27 10:10:49,408 Relaxation took 11.9s
2024-07-27 10:10:49,408 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.3 pTM=0.282 ipTM=0.136
2024-07-27 10:11:02,092 Relaxation took 12.7s
2024-07-27 10:11:02,092 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.2 pTM=0.289 ipTM=0.129
2024-07-27 10:11:15,929 Relaxation took 13.8s
2024-07-27 10:11:15,930 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.5 pTM=0.275 ipTM=0.1
2024-07-27 10:11:30,959 Relaxation took 15.0s
2024-07-27 10:11:30,959 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47 pTM=0.272 ipTM=0.098
2024-07-27 10:11:31,823 Done