2024-07-27 10:00:21,424 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 10:00:21,762 Running on GPU
2024-07-27 10:00:24,024 Found 6 citations for tools or databases
2024-07-27 10:00:24,024 Query 1/1: RNF8_CDC20 (length 984)
2024-07-27 10:00:24,495 Sleeping for 5s. Reason: PENDING
2024-07-27 10:00:29,946 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:00:38,366 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:00:45,823 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:00:51,260 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:00:59,701 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:01:05,137 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:01:15,578 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:01:25,007 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:01:30,432 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:01:36,841 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:01:47,268 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:01:53,685 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:02:03,102 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:02:10,523 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:02:17,954 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:02:28,386 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:02:37,832 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:02:47,271 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:02:56,690 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:03:06,117 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:03:16,544 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:03:22,962 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:03:29,397 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:03:36,823 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:03:44,243 Sleeping for 5s. Reason: PENDING
2024-07-27 10:03:49,682 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:03:55,101 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:04:04,525 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:04:10,941 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:04:16,366 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:04:22,784 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:04:31,211 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:04:38,627 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:04:48,039 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:05:01,481 Setting max_seq=508, max_extra_seq=2048
2024-07-27 10:08:02,673 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.2 pTM=0.415 ipTM=0.189
2024-07-27 10:08:25,234 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.442 ipTM=0.288 tol=11.1
2024-07-27 10:08:47,891 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.6 pTM=0.43 ipTM=0.203 tol=8.75
2024-07-27 10:09:10,620 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.422 ipTM=0.226 tol=6.32
2024-07-27 10:09:33,386 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.6 pTM=0.417 ipTM=0.195 tol=4.61
2024-07-27 10:09:56,162 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63 pTM=0.419 ipTM=0.2 tol=7.78
2024-07-27 10:10:18,992 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63 pTM=0.412 ipTM=0.171 tol=7.38
2024-07-27 10:10:41,832 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.1 pTM=0.412 ipTM=0.181 tol=6.76
2024-07-27 10:11:04,712 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.5 pTM=0.415 ipTM=0.186 tol=11.6
2024-07-27 10:11:27,574 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.3 pTM=0.413 ipTM=0.179 tol=9.55
2024-07-27 10:11:50,457 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.9 pTM=0.415 ipTM=0.18 tol=4.93
2024-07-27 10:12:13,330 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.9 pTM=0.414 ipTM=0.175 tol=3.92
2024-07-27 10:12:36,211 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.9 pTM=0.417 ipTM=0.18 tol=5.7
2024-07-27 10:12:59,098 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.7 pTM=0.413 ipTM=0.174 tol=2.85
2024-07-27 10:13:21,998 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.6 pTM=0.416 ipTM=0.176 tol=3.19
2024-07-27 10:13:44,893 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.2 pTM=0.415 ipTM=0.179 tol=4.04
2024-07-27 10:14:07,795 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.3 pTM=0.414 ipTM=0.176 tol=4.86
2024-07-27 10:14:30,684 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.5 pTM=0.415 ipTM=0.18 tol=4.3
2024-07-27 10:14:53,576 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.6 pTM=0.417 ipTM=0.187 tol=3.36
2024-07-27 10:15:16,459 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.4 pTM=0.416 ipTM=0.183 tol=3.19
2024-07-27 10:15:39,352 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.5 pTM=0.418 ipTM=0.184 tol=4.29
2024-07-27 10:16:02,240 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.5 pTM=0.417 ipTM=0.185 tol=3.52
2024-07-27 10:16:25,128 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.5 pTM=0.417 ipTM=0.182 tol=3.65
2024-07-27 10:16:47,999 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.8 pTM=0.417 ipTM=0.189 tol=3.17
2024-07-27 10:17:10,879 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.8 pTM=0.417 ipTM=0.185 tol=3.27
2024-07-27 10:17:33,739 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.8 pTM=0.418 ipTM=0.194 tol=4.15
2024-07-27 10:17:56,600 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.6 pTM=0.416 ipTM=0.178 tol=2.41
2024-07-27 10:18:19,446 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.7 pTM=0.42 ipTM=0.185 tol=2.4
2024-07-27 10:18:42,306 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.1 pTM=0.419 ipTM=0.187 tol=2.13
2024-07-27 10:19:05,174 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.2 pTM=0.419 ipTM=0.196 tol=4.84
2024-07-27 10:19:28,040 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.4 pTM=0.416 ipTM=0.183 tol=5.38
2024-07-27 10:19:28,041 alphafold2_multimer_v3_model_1_seed_000 took 859.6s (30 recycles)
2024-07-27 10:19:51,614 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.6 pTM=0.546 ipTM=0.482
2024-07-27 10:20:14,428 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.8 pTM=0.441 ipTM=0.231 tol=16.8
2024-07-27 10:20:37,244 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.9 pTM=0.455 ipTM=0.339 tol=7.43
2024-07-27 10:21:00,099 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.8 pTM=0.434 ipTM=0.224 tol=4.48
2024-07-27 10:21:22,963 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.9 pTM=0.433 ipTM=0.247 tol=5.23
2024-07-27 10:21:45,837 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.1 pTM=0.426 ipTM=0.196 tol=5.01
2024-07-27 10:22:08,712 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.5 pTM=0.423 ipTM=0.209 tol=3.95
2024-07-27 10:22:31,584 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.8 pTM=0.424 ipTM=0.192 tol=5.82
2024-07-27 10:22:54,514 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.2 pTM=0.421 ipTM=0.196 tol=4.1
2024-07-27 10:23:17,570 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.2 pTM=0.418 ipTM=0.189 tol=4.4
2024-07-27 10:23:40,658 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.8 pTM=0.417 ipTM=0.185 tol=2.46
2024-07-27 10:24:03,747 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.2 pTM=0.417 ipTM=0.188 tol=2.6
2024-07-27 10:24:26,814 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.7 pTM=0.417 ipTM=0.185 tol=2.98
2024-07-27 10:24:49,823 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.1 pTM=0.418 ipTM=0.184 tol=2.12
2024-07-27 10:25:12,846 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.8 pTM=0.417 ipTM=0.184 tol=2.38
2024-07-27 10:25:35,843 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.8 pTM=0.418 ipTM=0.185 tol=1.96
2024-07-27 10:25:58,824 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.6 pTM=0.417 ipTM=0.181 tol=2
2024-07-27 10:26:21,837 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.7 pTM=0.417 ipTM=0.189 tol=1.49
2024-07-27 10:26:44,837 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.4 pTM=0.417 ipTM=0.187 tol=1.88
2024-07-27 10:27:07,848 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.4 pTM=0.415 ipTM=0.184 tol=2.79
2024-07-27 10:27:30,812 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.3 pTM=0.417 ipTM=0.186 tol=2.1
2024-07-27 10:27:53,776 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.5 pTM=0.415 ipTM=0.187 tol=2.06
2024-07-27 10:28:16,773 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.5 pTM=0.418 ipTM=0.188 tol=2.19
2024-07-27 10:28:39,735 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.8 pTM=0.416 ipTM=0.183 tol=2.32
2024-07-27 10:29:02,695 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.6 pTM=0.419 ipTM=0.192 tol=3.23
2024-07-27 10:29:25,697 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.3 pTM=0.415 ipTM=0.183 tol=1.45
2024-07-27 10:29:48,668 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.1 pTM=0.417 ipTM=0.187 tol=2.26
2024-07-27 10:30:11,629 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.2 pTM=0.415 ipTM=0.184 tol=2.7
2024-07-27 10:30:34,605 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.3 pTM=0.417 ipTM=0.184 tol=2.38
2024-07-27 10:30:57,616 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.9 pTM=0.417 ipTM=0.181 tol=3.99
2024-07-27 10:31:20,584 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.6 pTM=0.417 ipTM=0.183 tol=2.1
2024-07-27 10:31:20,585 alphafold2_multimer_v3_model_2_seed_000 took 711.8s (30 recycles)
2024-07-27 10:31:44,264 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.9 pTM=0.491 ipTM=0.334
2024-07-27 10:32:07,270 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.7 pTM=0.408 ipTM=0.156 tol=14.1
2024-07-27 10:32:30,375 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.7 pTM=0.417 ipTM=0.181 tol=14.3
2024-07-27 10:32:53,423 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.9 pTM=0.413 ipTM=0.169 tol=5.91
2024-07-27 10:33:16,429 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.6 pTM=0.43 ipTM=0.244 tol=5.24
2024-07-27 10:33:39,437 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.5 pTM=0.414 ipTM=0.169 tol=4.47
2024-07-27 10:34:02,455 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.9 pTM=0.416 ipTM=0.195 tol=6.48
2024-07-27 10:34:25,477 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.2 pTM=0.407 ipTM=0.155 tol=9.12
2024-07-27 10:34:48,499 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.7 pTM=0.416 ipTM=0.184 tol=8.66
2024-07-27 10:35:11,527 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.9 pTM=0.411 ipTM=0.17 tol=8.67
2024-07-27 10:35:34,610 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.2 pTM=0.41 ipTM=0.175 tol=6.8
2024-07-27 10:35:57,673 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.8 pTM=0.408 ipTM=0.165 tol=5.95
2024-07-27 10:36:20,734 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.3 pTM=0.411 ipTM=0.174 tol=5.31
2024-07-27 10:36:43,750 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.41 ipTM=0.16 tol=4.21
2024-07-27 10:37:06,776 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.6 pTM=0.41 ipTM=0.165 tol=3.96
2024-07-27 10:37:29,814 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.5 pTM=0.407 ipTM=0.159 tol=5.51
2024-07-27 10:37:52,865 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.3 pTM=0.409 ipTM=0.169 tol=5.95
2024-07-27 10:38:15,900 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.8 pTM=0.409 ipTM=0.156 tol=4.5
2024-07-27 10:38:38,932 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.3 pTM=0.411 ipTM=0.169 tol=5.36
2024-07-27 10:39:01,971 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.1 pTM=0.407 ipTM=0.157 tol=6.45
2024-07-27 10:39:25,050 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.9 pTM=0.41 ipTM=0.171 tol=7.04
2024-07-27 10:39:48,080 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.6 pTM=0.406 ipTM=0.155 tol=5.11
2024-07-27 10:40:11,139 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61 pTM=0.413 ipTM=0.176 tol=6.07
2024-07-27 10:40:34,154 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.4 pTM=0.406 ipTM=0.156 tol=5.88
2024-07-27 10:40:57,240 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.8 pTM=0.413 ipTM=0.185 tol=7.08
2024-07-27 10:41:20,256 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.3 pTM=0.408 ipTM=0.164 tol=7.25
2024-07-27 10:41:43,323 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.4 pTM=0.41 ipTM=0.171 tol=8.3
2024-07-27 10:42:06,380 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.6 pTM=0.409 ipTM=0.159 tol=5.88
2024-07-27 10:42:29,441 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.1 pTM=0.411 ipTM=0.173 tol=6.94
2024-07-27 10:42:52,499 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.5 pTM=0.408 ipTM=0.155 tol=6.17
2024-07-27 10:43:15,578 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.2 pTM=0.414 ipTM=0.175 tol=7.48
2024-07-27 10:43:15,579 alphafold2_multimer_v3_model_3_seed_000 took 714.2s (30 recycles)
2024-07-27 10:43:39,258 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.3 pTM=0.451 ipTM=0.271
2024-07-27 10:44:02,311 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.6 pTM=0.405 ipTM=0.17 tol=19.6
2024-07-27 10:44:25,354 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.8 pTM=0.406 ipTM=0.171 tol=14.7
2024-07-27 10:44:48,410 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.4 pTM=0.407 ipTM=0.177 tol=7.16
2024-07-27 10:45:11,465 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.8 pTM=0.412 ipTM=0.169 tol=6.77
2024-07-27 10:45:34,524 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.8 pTM=0.405 ipTM=0.174 tol=10.1
2024-07-27 10:45:57,588 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.3 pTM=0.411 ipTM=0.179 tol=6.56
2024-07-27 10:46:20,597 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.5 pTM=0.413 ipTM=0.183 tol=8.7
2024-07-27 10:46:43,606 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.5 pTM=0.413 ipTM=0.179 tol=3.95
2024-07-27 10:47:06,584 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.4 pTM=0.417 ipTM=0.187 tol=3.62
2024-07-27 10:47:29,571 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.5 pTM=0.411 ipTM=0.176 tol=3.97
2024-07-27 10:47:52,539 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.3 pTM=0.415 ipTM=0.178 tol=2.66
2024-07-27 10:48:15,513 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.8 pTM=0.412 ipTM=0.174 tol=2.92
2024-07-27 10:48:38,497 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.8 pTM=0.413 ipTM=0.172 tol=3.56
2024-07-27 10:49:01,467 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60 pTM=0.412 ipTM=0.172 tol=4.55
2024-07-27 10:49:24,469 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.2 pTM=0.409 ipTM=0.162 tol=5.99
2024-07-27 10:49:47,442 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.4 pTM=0.414 ipTM=0.187 tol=5.04
2024-07-27 10:50:10,421 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.1 pTM=0.411 ipTM=0.17 tol=7.05
2024-07-27 10:50:33,399 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.8 pTM=0.41 ipTM=0.172 tol=5.07
2024-07-27 10:50:56,370 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.6 pTM=0.415 ipTM=0.177 tol=4.41
2024-07-27 10:51:19,325 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.6 pTM=0.41 ipTM=0.176 tol=5.7
2024-07-27 10:51:42,288 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.8 pTM=0.415 ipTM=0.176 tol=4.13
2024-07-27 10:52:05,256 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.9 pTM=0.413 ipTM=0.182 tol=5.13
2024-07-27 10:52:28,200 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.5 pTM=0.415 ipTM=0.181 tol=4.46
2024-07-27 10:52:51,143 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.6 pTM=0.414 ipTM=0.183 tol=3.07
2024-07-27 10:53:14,066 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.3 pTM=0.418 ipTM=0.194 tol=4.36
2024-07-27 10:53:37,006 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.7 pTM=0.409 ipTM=0.178 tol=5.07
2024-07-27 10:53:59,961 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.3 pTM=0.414 ipTM=0.18 tol=3.49
2024-07-27 10:54:22,897 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.8 pTM=0.411 ipTM=0.181 tol=3.87
2024-07-27 10:54:45,824 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.8 pTM=0.415 ipTM=0.181 tol=3.51
2024-07-27 10:55:08,761 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.9 pTM=0.412 ipTM=0.183 tol=3.02
2024-07-27 10:55:08,762 alphafold2_multimer_v3_model_4_seed_000 took 712.4s (30 recycles)
2024-07-27 10:55:32,345 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.6 pTM=0.473 ipTM=0.338
2024-07-27 10:55:55,278 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.7 pTM=0.405 ipTM=0.154 tol=13.5
2024-07-27 10:56:18,266 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.8 pTM=0.405 ipTM=0.16 tol=13.4
2024-07-27 10:56:41,298 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.1 pTM=0.403 ipTM=0.147 tol=8.73
2024-07-27 10:57:04,327 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.4 pTM=0.405 ipTM=0.154 tol=8.41
2024-07-27 10:57:27,354 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.8 pTM=0.407 ipTM=0.159 tol=6.14
2024-07-27 10:57:50,387 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.7 pTM=0.407 ipTM=0.159 tol=5.16
2024-07-27 10:58:13,418 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.7 pTM=0.41 ipTM=0.161 tol=3.62
2024-07-27 10:58:36,444 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.1 pTM=0.407 ipTM=0.156 tol=4.95
2024-07-27 10:58:59,454 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.9 pTM=0.407 ipTM=0.156 tol=4.93
2024-07-27 10:59:22,493 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.6 pTM=0.408 ipTM=0.151 tol=4.48
2024-07-27 10:59:45,511 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.6 pTM=0.408 ipTM=0.153 tol=5.11
2024-07-27 11:00:08,522 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.5 pTM=0.409 ipTM=0.158 tol=5.75
2024-07-27 11:00:31,522 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.8 pTM=0.412 ipTM=0.165 tol=5.57
2024-07-27 11:00:54,543 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.1 pTM=0.407 ipTM=0.152 tol=5.53
2024-07-27 11:01:17,572 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61 pTM=0.407 ipTM=0.147 tol=6.06
2024-07-27 11:01:40,589 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.9 pTM=0.407 ipTM=0.152 tol=5.09
2024-07-27 11:02:03,624 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.9 pTM=0.41 ipTM=0.16 tol=4.94
2024-07-27 11:02:26,657 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.9 pTM=0.407 ipTM=0.148 tol=2.52
2024-07-27 11:02:49,681 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.8 pTM=0.408 ipTM=0.156 tol=4.13
2024-07-27 11:03:12,703 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.9 pTM=0.407 ipTM=0.151 tol=2.54
2024-07-27 11:03:35,733 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.8 pTM=0.41 ipTM=0.165 tol=3.65
2024-07-27 11:03:58,777 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61 pTM=0.406 ipTM=0.154 tol=3.53
2024-07-27 11:04:21,832 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.8 pTM=0.408 ipTM=0.161 tol=5.44
2024-07-27 11:04:44,887 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61 pTM=0.405 ipTM=0.152 tol=3.92
2024-07-27 11:05:07,915 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61 pTM=0.408 ipTM=0.157 tol=4.42
2024-07-27 11:05:30,963 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.9 pTM=0.406 ipTM=0.153 tol=3.43
2024-07-27 11:05:53,989 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.8 pTM=0.409 ipTM=0.16 tol=3.27
2024-07-27 11:06:17,019 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61 pTM=0.408 ipTM=0.157 tol=2.12
2024-07-27 11:06:40,052 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.9 pTM=0.41 ipTM=0.167 tol=3.73
2024-07-27 11:07:03,141 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.3 pTM=0.406 ipTM=0.16 tol=2.96
2024-07-27 11:07:03,142 alphafold2_multimer_v3_model_5_seed_000 took 713.6s (30 recycles)
2024-07-27 11:07:03,908 reranking models by 'multimer' metric
2024-07-27 11:07:05,150 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 11:08:50,950 Relaxation took 107.0s
2024-07-27 11:08:50,950 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.6 pTM=0.417 ipTM=0.183
2024-07-27 11:10:57,001 Relaxation took 126.0s
2024-07-27 11:10:57,002 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.4 pTM=0.416 ipTM=0.183
2024-07-27 11:13:47,910 Relaxation took 170.9s
2024-07-27 11:13:47,910 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.9 pTM=0.412 ipTM=0.183
2024-07-27 11:15:28,511 Relaxation took 100.6s
2024-07-27 11:15:28,511 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.2 pTM=0.414 ipTM=0.175
2024-07-27 11:17:33,620 Relaxation took 125.1s
2024-07-27 11:17:33,620 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.3 pTM=0.406 ipTM=0.16
2024-07-27 11:17:36,058 Done