2024-07-27 10:04:58,437 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 10:04:59,774 Running on GPU
2024-07-27 10:05:04,639 Found 6 citations for tools or databases
2024-07-27 10:05:04,639 Query 1/1: RNF8_FBXL16 (length 964)
2024-07-27 10:05:05,113 Sleeping for 9s. Reason: PENDING
2024-07-27 10:05:14,532 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:05:23,958 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:05:30,393 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:05:39,818 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:05:45,251 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:05:50,685 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:05:56,107 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:06:03,516 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:06:11,955 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:06:18,365 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:06:28,792 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:06:38,211 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:06:45,659 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:06:51,087 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:06:58,503 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:07:08,921 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:07:16,028 Sleeping for 10s. Reason: PENDING
2024-07-27 10:07:26,449 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:07:32,889 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:07:41,304 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:07:49,745 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:07:57,165 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:08:05,594 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:08:12,039 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:08:21,471 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:08:27,885 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:08:35,327 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:08:49,497 Setting max_seq=508, max_extra_seq=2048
2024-07-27 10:12:26,576 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.2 pTM=0.465 ipTM=0.172
2024-07-27 10:12:50,982 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.8 pTM=0.468 ipTM=0.183 tol=10.5
2024-07-27 10:13:15,436 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.9 pTM=0.466 ipTM=0.188 tol=9.01
2024-07-27 10:13:39,982 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.9 pTM=0.466 ipTM=0.192 tol=5.23
2024-07-27 10:14:04,573 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.6 pTM=0.466 ipTM=0.178 tol=2.16
2024-07-27 10:14:29,176 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.6 pTM=0.465 ipTM=0.177 tol=2.56
2024-07-27 10:14:53,801 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.3 pTM=0.466 ipTM=0.161 tol=3.67
2024-07-27 10:15:18,421 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.7 pTM=0.466 ipTM=0.17 tol=3.93
2024-07-27 10:15:43,059 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.6 pTM=0.467 ipTM=0.177 tol=3.81
2024-07-27 10:16:07,685 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.6 pTM=0.466 ipTM=0.185 tol=3.43
2024-07-27 10:16:32,311 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.4 pTM=0.466 ipTM=0.18 tol=3.52
2024-07-27 10:16:56,929 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.2 pTM=0.465 ipTM=0.183 tol=2.1
2024-07-27 10:17:21,541 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.2 pTM=0.465 ipTM=0.181 tol=2.2
2024-07-27 10:17:46,153 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.4 pTM=0.465 ipTM=0.176 tol=1.75
2024-07-27 10:18:10,763 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.3 pTM=0.465 ipTM=0.172 tol=2.18
2024-07-27 10:18:35,378 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.6 pTM=0.463 ipTM=0.167 tol=1.95
2024-07-27 10:18:59,976 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.6 pTM=0.464 ipTM=0.163 tol=2.1
2024-07-27 10:19:24,592 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.7 pTM=0.464 ipTM=0.167 tol=1.78
2024-07-27 10:19:49,191 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.3 pTM=0.465 ipTM=0.17 tol=4.4
2024-07-27 10:20:13,788 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.3 pTM=0.464 ipTM=0.163 tol=4.46
2024-07-27 10:20:38,390 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.2 pTM=0.465 ipTM=0.166 tol=2.32
2024-07-27 10:21:02,994 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.2 pTM=0.466 ipTM=0.163 tol=2.29
2024-07-27 10:21:27,584 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.2 pTM=0.465 ipTM=0.163 tol=3.01
2024-07-27 10:21:52,185 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.2 pTM=0.471 ipTM=0.185 tol=4.41
2024-07-27 10:22:16,760 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.1 pTM=0.468 ipTM=0.175 tol=3.65
2024-07-27 10:22:41,342 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.2 pTM=0.469 ipTM=0.179 tol=2.56
2024-07-27 10:23:05,921 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.2 pTM=0.467 ipTM=0.178 tol=2.96
2024-07-27 10:23:30,508 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.2 pTM=0.475 ipTM=0.214 tol=1.76
2024-07-27 10:23:55,100 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.4 pTM=0.472 ipTM=0.192 tol=3.54
2024-07-27 10:24:19,687 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.4 pTM=0.472 ipTM=0.183 tol=3.37
2024-07-27 10:24:44,273 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.2 pTM=0.474 ipTM=0.192 tol=3.66
2024-07-27 10:24:44,274 alphafold2_multimer_v3_model_1_seed_000 took 933.9s (30 recycles)
2024-07-27 10:25:09,763 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.5 pTM=0.479 ipTM=0.196
2024-07-27 10:25:34,411 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.3 pTM=0.476 ipTM=0.201 tol=10.3
2024-07-27 10:25:59,036 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.1 pTM=0.476 ipTM=0.207 tol=11.1
2024-07-27 10:26:23,695 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.4 pTM=0.472 ipTM=0.187 tol=4.46
2024-07-27 10:26:48,346 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69 pTM=0.465 ipTM=0.172 tol=6.35
2024-07-27 10:27:13,000 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.6 pTM=0.465 ipTM=0.176 tol=5.53
2024-07-27 10:27:37,676 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.5 pTM=0.47 ipTM=0.19 tol=9.68
2024-07-27 10:28:02,343 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.6 pTM=0.469 ipTM=0.183 tol=6.09
2024-07-27 10:28:27,019 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.7 pTM=0.468 ipTM=0.187 tol=3.64
2024-07-27 10:28:51,671 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.8 pTM=0.47 ipTM=0.207 tol=2.7
2024-07-27 10:29:16,340 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.2 pTM=0.467 ipTM=0.173 tol=4.49
2024-07-27 10:29:40,998 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.6 pTM=0.474 ipTM=0.2 tol=6.39
2024-07-27 10:30:05,665 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.8 pTM=0.475 ipTM=0.22 tol=6.63
2024-07-27 10:30:30,322 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.4 pTM=0.468 ipTM=0.183 tol=4.9
2024-07-27 10:30:54,966 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.6 pTM=0.472 ipTM=0.205 tol=5.36
2024-07-27 10:31:19,605 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.1 pTM=0.477 ipTM=0.241 tol=7.61
2024-07-27 10:31:44,265 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.6 pTM=0.469 ipTM=0.184 tol=5.99
2024-07-27 10:32:08,924 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.8 pTM=0.471 ipTM=0.195 tol=7.64
2024-07-27 10:32:33,574 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.4 pTM=0.485 ipTM=0.277 tol=3.56
2024-07-27 10:32:58,225 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.1 pTM=0.474 ipTM=0.196 tol=3.19
2024-07-27 10:33:22,858 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.9 pTM=0.478 ipTM=0.209 tol=4.66
2024-07-27 10:33:47,510 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.469 ipTM=0.182 tol=4.89
2024-07-27 10:34:12,159 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.6 pTM=0.47 ipTM=0.194 tol=5.39
2024-07-27 10:34:36,837 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.4 pTM=0.465 ipTM=0.168 tol=7.03
2024-07-27 10:35:01,490 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.6 pTM=0.471 ipTM=0.195 tol=9.1
2024-07-27 10:35:26,163 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.4 pTM=0.465 ipTM=0.169 tol=5.57
2024-07-27 10:35:50,835 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.3 pTM=0.463 ipTM=0.175 tol=5.69
2024-07-27 10:36:15,498 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.2 pTM=0.472 ipTM=0.218 tol=3.65
2024-07-27 10:36:40,170 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.1 pTM=0.467 ipTM=0.173 tol=6.73
2024-07-27 10:37:04,833 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.2 pTM=0.47 ipTM=0.185 tol=7.18
2024-07-27 10:37:29,499 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.5 pTM=0.469 ipTM=0.175 tol=9.14
2024-07-27 10:37:29,500 alphafold2_multimer_v3_model_2_seed_000 took 764.4s (30 recycles)
2024-07-27 10:37:55,101 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.2 pTM=0.464 ipTM=0.179
2024-07-27 10:38:19,880 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67 pTM=0.477 ipTM=0.213 tol=17.7
2024-07-27 10:38:44,610 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.2 pTM=0.488 ipTM=0.228 tol=9.3
2024-07-27 10:39:09,350 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.484 ipTM=0.199 tol=3.53
2024-07-27 10:39:34,092 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.8 pTM=0.47 ipTM=0.168 tol=2.39
2024-07-27 10:39:58,829 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.8 pTM=0.473 ipTM=0.167 tol=2.86
2024-07-27 10:40:23,549 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.6 pTM=0.474 ipTM=0.172 tol=1.61
2024-07-27 10:40:48,270 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.8 pTM=0.479 ipTM=0.169 tol=2.76
2024-07-27 10:41:12,985 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.8 pTM=0.485 ipTM=0.196 tol=2.67
2024-07-27 10:41:37,698 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.9 pTM=0.495 ipTM=0.217 tol=4.81
2024-07-27 10:42:02,411 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.1 pTM=0.482 ipTM=0.182 tol=3.02
2024-07-27 10:42:27,126 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.2 pTM=0.488 ipTM=0.192 tol=2.85
2024-07-27 10:42:51,832 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.9 pTM=0.479 ipTM=0.169 tol=3.28
2024-07-27 10:43:16,551 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.9 pTM=0.507 ipTM=0.397 tol=8.52
2024-07-27 10:43:41,255 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.6 pTM=0.502 ipTM=0.271 tol=3.47
2024-07-27 10:44:05,986 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.2 pTM=0.491 ipTM=0.249 tol=1.66
2024-07-27 10:44:30,708 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.8 pTM=0.495 ipTM=0.308 tol=3.62
2024-07-27 10:44:55,408 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67 pTM=0.488 ipTM=0.266 tol=3.63
2024-07-27 10:45:20,104 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.7 pTM=0.483 ipTM=0.244 tol=1.46
2024-07-27 10:45:44,788 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.9 pTM=0.486 ipTM=0.254 tol=1.76
2024-07-27 10:46:09,480 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.7 pTM=0.483 ipTM=0.24 tol=1.81
2024-07-27 10:46:34,179 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.9 pTM=0.481 ipTM=0.245 tol=1.89
2024-07-27 10:46:58,846 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.7 pTM=0.495 ipTM=0.275 tol=2.94
2024-07-27 10:47:23,498 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.5 ipTM=0.245 tol=2.74
2024-07-27 10:47:48,147 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.5 pTM=0.492 ipTM=0.276 tol=2
2024-07-27 10:48:12,774 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.2 pTM=0.511 ipTM=0.39 tol=1.74
2024-07-27 10:48:37,415 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.7 pTM=0.497 ipTM=0.292 tol=3.6
2024-07-27 10:49:02,054 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.5 pTM=0.503 ipTM=0.312 tol=3.17
2024-07-27 10:49:26,689 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.9 pTM=0.512 ipTM=0.37 tol=1.65
2024-07-27 10:49:51,307 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.9 pTM=0.515 ipTM=0.289 tol=2.35
2024-07-27 10:50:15,937 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.9 pTM=0.519 ipTM=0.291 tol=2.22
2024-07-27 10:50:15,938 alphafold2_multimer_v3_model_3_seed_000 took 765.6s (30 recycles)
2024-07-27 10:50:41,417 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65 pTM=0.489 ipTM=0.246
2024-07-27 10:51:06,102 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.7 pTM=0.475 ipTM=0.195 tol=11.4
2024-07-27 10:51:30,752 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.6 pTM=0.497 ipTM=0.324 tol=9.95
2024-07-27 10:51:55,398 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.504 ipTM=0.348 tol=7.36
2024-07-27 10:52:20,066 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.9 pTM=0.48 ipTM=0.238 tol=3.3
2024-07-27 10:52:44,749 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.5 pTM=0.485 ipTM=0.25 tol=2.36
2024-07-27 10:53:09,423 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67 pTM=0.493 ipTM=0.308 tol=1.83
2024-07-27 10:53:34,123 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.4 pTM=0.481 ipTM=0.21 tol=2.05
2024-07-27 10:53:58,825 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.5 pTM=0.48 ipTM=0.21 tol=1.41
2024-07-27 10:54:23,525 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.5 pTM=0.478 ipTM=0.214 tol=1.83
2024-07-27 10:54:48,208 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.3 pTM=0.48 ipTM=0.223 tol=3
2024-07-27 10:55:12,891 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.3 pTM=0.497 ipTM=0.331 tol=3.05
2024-07-27 10:55:37,585 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.6 pTM=0.483 ipTM=0.24 tol=2.13
2024-07-27 10:56:02,300 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.2 pTM=0.479 ipTM=0.221 tol=2.3
2024-07-27 10:56:27,026 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.472 ipTM=0.21 tol=1.95
2024-07-27 10:56:51,772 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.9 pTM=0.47 ipTM=0.189 tol=2.58
2024-07-27 10:57:16,513 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.7 pTM=0.477 ipTM=0.232 tol=4.6
2024-07-27 10:57:41,228 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.502 ipTM=0.401 tol=4.28
2024-07-27 10:58:05,943 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.2 pTM=0.482 ipTM=0.241 tol=2.7
2024-07-27 10:58:30,673 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.6 pTM=0.487 ipTM=0.278 tol=2.76
2024-07-27 10:58:55,386 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66 pTM=0.484 ipTM=0.25 tol=1.87
2024-07-27 10:59:20,110 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.9 pTM=0.489 ipTM=0.273 tol=2.93
2024-07-27 10:59:44,822 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.8 pTM=0.492 ipTM=0.333 tol=1.77
2024-07-27 11:00:09,534 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.1 pTM=0.48 ipTM=0.224 tol=2.32
2024-07-27 11:00:34,260 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.5 pTM=0.48 ipTM=0.234 tol=3.47
2024-07-27 11:00:58,988 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.8 pTM=0.479 ipTM=0.214 tol=2.34
2024-07-27 11:01:23,728 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.7 pTM=0.476 ipTM=0.21 tol=1.43
2024-07-27 11:01:48,441 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.8 pTM=0.489 ipTM=0.276 tol=2.19
2024-07-27 11:02:13,149 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.6 pTM=0.493 ipTM=0.337 tol=2.43
2024-07-27 11:02:37,862 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.48 ipTM=0.22 tol=3.6
2024-07-27 11:03:02,595 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.6 pTM=0.48 ipTM=0.224 tol=2.08
2024-07-27 11:03:02,596 alphafold2_multimer_v3_model_4_seed_000 took 765.8s (30 recycles)
2024-07-27 11:03:28,187 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.2 pTM=0.47 ipTM=0.198
2024-07-27 11:03:52,926 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.6 pTM=0.48 ipTM=0.21 tol=14
2024-07-27 11:04:17,660 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.9 pTM=0.488 ipTM=0.203 tol=4.34
2024-07-27 11:04:42,352 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.3 pTM=0.498 ipTM=0.21 tol=8.55
2024-07-27 11:05:07,040 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.1 pTM=0.492 ipTM=0.226 tol=4.46
2024-07-27 11:05:31,712 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.4 pTM=0.497 ipTM=0.21 tol=4.86
2024-07-27 11:05:56,413 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.1 pTM=0.489 ipTM=0.214 tol=5.48
2024-07-27 11:06:21,092 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.4 pTM=0.495 ipTM=0.21 tol=8.28
2024-07-27 11:06:45,778 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.2 pTM=0.493 ipTM=0.21 tol=3.75
2024-07-27 11:07:10,479 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.6 pTM=0.494 ipTM=0.204 tol=4.07
2024-07-27 11:07:35,169 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.2 pTM=0.496 ipTM=0.207 tol=3.32
2024-07-27 11:07:59,872 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.2 pTM=0.492 ipTM=0.2 tol=4.68
2024-07-27 11:08:24,589 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.9 pTM=0.484 ipTM=0.19 tol=3.82
2024-07-27 11:08:49,263 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.2 pTM=0.521 ipTM=0.429 tol=4.11
2024-07-27 11:09:13,933 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.2 pTM=0.516 ipTM=0.341 tol=2.57
2024-07-27 11:09:38,614 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66 pTM=0.504 ipTM=0.325 tol=3.33
2024-07-27 11:10:03,299 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.6 pTM=0.495 ipTM=0.25 tol=2.98
2024-07-27 11:10:28,015 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.9 pTM=0.482 ipTM=0.192 tol=4.02
2024-07-27 11:10:52,728 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65 pTM=0.486 ipTM=0.217 tol=5.06
2024-07-27 11:11:17,446 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.8 pTM=0.483 ipTM=0.182 tol=3.3
2024-07-27 11:11:42,156 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.1 pTM=0.49 ipTM=0.215 tol=11.2
2024-07-27 11:12:06,847 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.6 pTM=0.519 ipTM=0.461 tol=12.6
2024-07-27 11:12:31,530 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.6 pTM=0.524 ipTM=0.425 tol=4.03
2024-07-27 11:12:56,222 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66 pTM=0.513 ipTM=0.42 tol=1.79
2024-07-27 11:13:20,884 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.1 pTM=0.515 ipTM=0.398 tol=1.85
2024-07-27 11:13:45,541 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.2 pTM=0.516 ipTM=0.369 tol=2
2024-07-27 11:14:10,208 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66 pTM=0.51 ipTM=0.332 tol=2.13
2024-07-27 11:14:34,858 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.4 pTM=0.504 ipTM=0.289 tol=1.75
2024-07-27 11:14:59,523 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.6 pTM=0.5 ipTM=0.247 tol=2.91
2024-07-27 11:15:24,208 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.2 pTM=0.493 ipTM=0.204 tol=3.54
2024-07-27 11:15:48,887 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.3 pTM=0.495 ipTM=0.209 tol=2.4
2024-07-27 11:15:48,888 alphafold2_multimer_v3_model_5_seed_000 took 765.5s (30 recycles)
2024-07-27 11:15:49,718 reranking models by 'multimer' metric
2024-07-27 11:15:53,357 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 11:17:44,232 Relaxation took 114.5s
2024-07-27 11:17:44,232 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.9 pTM=0.519 ipTM=0.291
2024-07-27 11:19:22,816 Relaxation took 98.6s
2024-07-27 11:19:22,817 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.6 pTM=0.48 ipTM=0.224
2024-07-27 11:20:44,391 Relaxation took 81.6s
2024-07-27 11:20:44,391 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.3 pTM=0.495 ipTM=0.209
2024-07-27 11:22:32,258 Relaxation took 107.9s
2024-07-27 11:22:32,258 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.2 pTM=0.474 ipTM=0.192
2024-07-27 11:24:30,050 Relaxation took 117.8s
2024-07-27 11:24:30,051 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.5 pTM=0.469 ipTM=0.175
2024-07-27 11:24:32,352 Done