2024-07-27 10:06:41,297 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 10:06:41,637 Running on GPU
2024-07-27 10:06:44,411 Found 6 citations for tools or databases
2024-07-27 10:06:44,411 Query 1/1: RNF8_KLHL18 (length 1059)
2024-07-27 10:06:44,892 Sleeping for 8s. Reason: PENDING
2024-07-27 10:06:53,330 Sleeping for 6s. Reason: RUNNING
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2024-07-27 10:08:47,676 Sleeping for 5s. Reason: RUNNING
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2024-07-27 10:09:43,671 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:09:53,090 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:09:59,511 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:10:04,922 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:10:15,350 Sleeping for 7s. Reason: RUNNING
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2024-07-27 10:10:33,212 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:10:38,631 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:10:49,083 Sleeping for 6s. Reason: PENDING
2024-07-27 10:10:55,513 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:11:04,967 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:11:11,398 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:11:21,837 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:11:29,280 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:11:37,737 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:11:46,173 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:11:51,594 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:11:59,015 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:12:05,455 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:12:13,876 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:12:23,296 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:12:36,138 Setting max_seq=508, max_extra_seq=2048
2024-07-27 10:16:46,907 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.2 pTM=0.454 ipTM=0.434
2024-07-27 10:17:16,482 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.2 pTM=0.5 ipTM=0.51 tol=10
2024-07-27 10:17:46,180 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.5 pTM=0.464 ipTM=0.471 tol=3.76
2024-07-27 10:18:15,947 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.2 pTM=0.472 ipTM=0.478 tol=2.36
2024-07-27 10:18:45,777 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.2 pTM=0.474 ipTM=0.489 tol=4.17
2024-07-27 10:19:15,614 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.9 pTM=0.476 ipTM=0.49 tol=2.37
2024-07-27 10:19:45,463 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.9 pTM=0.47 ipTM=0.478 tol=1.88
2024-07-27 10:20:15,335 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73 pTM=0.475 ipTM=0.489 tol=1.67
2024-07-27 10:20:45,208 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.9 pTM=0.472 ipTM=0.485 tol=2.19
2024-07-27 10:21:15,073 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.9 pTM=0.475 ipTM=0.489 tol=4.46
2024-07-27 10:21:44,938 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.9 pTM=0.472 ipTM=0.486 tol=4.41
2024-07-27 10:22:14,795 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.9 pTM=0.476 ipTM=0.496 tol=7.85
2024-07-27 10:22:44,671 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.9 pTM=0.467 ipTM=0.482 tol=5.93
2024-07-27 10:23:14,727 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.1 pTM=0.478 ipTM=0.498 tol=4.71
2024-07-27 10:23:44,859 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.7 pTM=0.472 ipTM=0.488 tol=4
2024-07-27 10:24:14,915 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73 pTM=0.478 ipTM=0.498 tol=3.25
2024-07-27 10:24:44,916 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73 pTM=0.471 ipTM=0.49 tol=3.09
2024-07-27 10:25:14,883 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.9 pTM=0.474 ipTM=0.495 tol=1.29
2024-07-27 10:25:44,838 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.9 pTM=0.467 ipTM=0.483 tol=1.36
2024-07-27 10:26:14,781 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.9 pTM=0.469 ipTM=0.488 tol=2.35
2024-07-27 10:26:44,753 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.9 pTM=0.472 ipTM=0.489 tol=1.98
2024-07-27 10:27:14,706 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.8 pTM=0.472 ipTM=0.488 tol=1.54
2024-07-27 10:27:44,666 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.7 pTM=0.464 ipTM=0.476 tol=1.8
2024-07-27 10:28:14,601 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.1 pTM=0.475 ipTM=0.496 tol=1.84
2024-07-27 10:28:44,552 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.9 pTM=0.467 ipTM=0.48 tol=2.54
2024-07-27 10:29:14,488 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.1 pTM=0.472 ipTM=0.489 tol=2.28
2024-07-27 10:29:44,446 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73 pTM=0.47 ipTM=0.484 tol=1.8
2024-07-27 10:30:14,394 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.9 pTM=0.474 ipTM=0.49 tol=1.21
2024-07-27 10:30:44,331 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.8 pTM=0.466 ipTM=0.474 tol=1.3
2024-07-27 10:31:14,273 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73 pTM=0.472 ipTM=0.489 tol=2.45
2024-07-27 10:31:44,248 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.9 pTM=0.465 ipTM=0.476 tol=1.27
2024-07-27 10:31:44,249 alphafold2_multimer_v3_model_1_seed_000 took 1141.7s (30 recycles)
2024-07-27 10:32:15,083 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.6 pTM=0.467 ipTM=0.453
2024-07-27 10:32:45,046 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.6 pTM=0.513 ipTM=0.496 tol=9.3
2024-07-27 10:33:14,991 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.1 pTM=0.491 ipTM=0.453 tol=3.42
2024-07-27 10:33:44,932 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.1 pTM=0.496 ipTM=0.448 tol=2.49
2024-07-27 10:34:14,936 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.3 pTM=0.477 ipTM=0.429 tol=5.39
2024-07-27 10:34:44,879 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.6 pTM=0.494 ipTM=0.438 tol=4.38
2024-07-27 10:35:14,844 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.4 pTM=0.486 ipTM=0.44 tol=3.07
2024-07-27 10:35:44,785 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.7 pTM=0.492 ipTM=0.443 tol=3.09
2024-07-27 10:36:14,801 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.4 pTM=0.483 ipTM=0.443 tol=7.41
2024-07-27 10:36:44,780 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.4 pTM=0.492 ipTM=0.443 tol=2.44
2024-07-27 10:37:14,738 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.1 pTM=0.483 ipTM=0.452 tol=2.1
2024-07-27 10:37:44,690 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.2 pTM=0.498 ipTM=0.469 tol=1.32
2024-07-27 10:38:14,647 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.2 pTM=0.488 ipTM=0.466 tol=1.16
2024-07-27 10:38:44,620 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.4 pTM=0.509 ipTM=0.488 tol=1.08
2024-07-27 10:39:14,592 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.4 pTM=0.494 ipTM=0.48 tol=1.52
2024-07-27 10:39:44,543 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.5 pTM=0.51 ipTM=0.489 tol=1.17
2024-07-27 10:40:14,478 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.5 pTM=0.497 ipTM=0.486 tol=2.13
2024-07-27 10:40:44,452 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.5 pTM=0.512 ipTM=0.505 tol=1.83
2024-07-27 10:41:14,407 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.4 pTM=0.492 ipTM=0.492 tol=1.08
2024-07-27 10:41:44,347 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.4 pTM=0.507 ipTM=0.503 tol=1.57
2024-07-27 10:42:14,286 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.4 pTM=0.5 ipTM=0.496 tol=1.52
2024-07-27 10:42:44,207 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.4 pTM=0.506 ipTM=0.49 tol=1.6
2024-07-27 10:43:14,143 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.2 pTM=0.489 ipTM=0.48 tol=1.25
2024-07-27 10:43:44,088 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.6 pTM=0.509 ipTM=0.502 tol=1.92
2024-07-27 10:44:14,032 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.4 pTM=0.496 ipTM=0.497 tol=2.92
2024-07-27 10:44:43,956 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.5 pTM=0.507 ipTM=0.498 tol=0.789
2024-07-27 10:45:13,905 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.3 pTM=0.495 ipTM=0.496 tol=1.55
2024-07-27 10:45:43,841 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.5 pTM=0.511 ipTM=0.511 tol=1.47
2024-07-27 10:46:13,780 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.4 pTM=0.505 ipTM=0.507 tol=1.3
2024-07-27 10:46:43,731 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.6 pTM=0.516 ipTM=0.525 tol=1.52
2024-07-27 10:47:13,665 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.4 pTM=0.499 ipTM=0.508 tol=0.854
2024-07-27 10:47:13,666 alphafold2_multimer_v3_model_2_seed_000 took 928.5s (30 recycles)
2024-07-27 10:47:44,494 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.6 pTM=0.468 ipTM=0.464
2024-07-27 10:48:14,400 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.2 pTM=0.548 ipTM=0.567 tol=30.6
2024-07-27 10:48:44,314 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.8 pTM=0.532 ipTM=0.548 tol=5.36
2024-07-27 10:49:14,239 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.6 pTM=0.522 ipTM=0.547 tol=4.02
2024-07-27 10:49:44,189 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.1 pTM=0.508 ipTM=0.54 tol=3.58
2024-07-27 10:50:14,144 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74 pTM=0.514 ipTM=0.55 tol=2.71
2024-07-27 10:50:44,089 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.1 pTM=0.51 ipTM=0.538 tol=2.51
2024-07-27 10:51:14,021 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.2 pTM=0.516 ipTM=0.545 tol=2.96
2024-07-27 10:51:43,966 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.1 pTM=0.51 ipTM=0.54 tol=3.85
2024-07-27 10:52:13,914 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.1 pTM=0.52 ipTM=0.556 tol=3.26
2024-07-27 10:52:43,844 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.9 pTM=0.515 ipTM=0.549 tol=2.09
2024-07-27 10:53:13,782 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.8 pTM=0.52 ipTM=0.56 tol=2.32
2024-07-27 10:53:43,703 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.8 pTM=0.506 ipTM=0.531 tol=2.38
2024-07-27 10:54:13,628 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.8 pTM=0.521 ipTM=0.558 tol=1.63
2024-07-27 10:54:43,563 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.9 pTM=0.515 ipTM=0.551 tol=4.16
2024-07-27 10:55:13,478 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.1 pTM=0.524 ipTM=0.558 tol=2.75
2024-07-27 10:55:43,380 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.9 pTM=0.514 ipTM=0.546 tol=2.34
2024-07-27 10:56:13,287 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.8 pTM=0.51 ipTM=0.539 tol=3.25
2024-07-27 10:56:43,201 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.8 pTM=0.505 ipTM=0.539 tol=1.54
2024-07-27 10:57:13,115 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.8 pTM=0.521 ipTM=0.555 tol=2.88
2024-07-27 10:57:43,034 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.9 pTM=0.517 ipTM=0.547 tol=1.92
2024-07-27 10:58:12,947 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.8 pTM=0.521 ipTM=0.55 tol=3.13
2024-07-27 10:58:42,874 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.8 pTM=0.503 ipTM=0.524 tol=1.21
2024-07-27 10:59:12,792 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.9 pTM=0.522 ipTM=0.553 tol=3.24
2024-07-27 10:59:42,731 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.9 pTM=0.515 ipTM=0.543 tol=2.32
2024-07-27 11:00:12,661 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.8 pTM=0.52 ipTM=0.556 tol=1.45
2024-07-27 11:00:42,604 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.9 pTM=0.51 ipTM=0.537 tol=2.88
2024-07-27 11:01:12,530 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.8 pTM=0.521 ipTM=0.553 tol=2
2024-07-27 11:01:42,461 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.9 pTM=0.509 ipTM=0.527 tol=1.8
2024-07-27 11:02:12,383 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.9 pTM=0.521 ipTM=0.548 tol=4.73
2024-07-27 11:02:42,312 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.1 pTM=0.52 ipTM=0.548 tol=2.79
2024-07-27 11:02:42,313 alphafold2_multimer_v3_model_3_seed_000 took 927.8s (30 recycles)
2024-07-27 11:03:13,172 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.7 pTM=0.464 ipTM=0.496
2024-07-27 11:03:43,087 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.1 pTM=0.484 ipTM=0.439 tol=20.7
2024-07-27 11:04:13,030 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.7 pTM=0.432 ipTM=0.337 tol=7.64
2024-07-27 11:04:43,000 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.3 pTM=0.437 ipTM=0.313 tol=4.46
2024-07-27 11:05:12,967 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.5 pTM=0.449 ipTM=0.35 tol=3.9
2024-07-27 11:05:42,968 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.9 pTM=0.432 ipTM=0.259 tol=3.15
2024-07-27 11:06:12,966 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.5 pTM=0.407 ipTM=0.198 tol=3.07
2024-07-27 11:06:42,979 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.2 pTM=0.414 ipTM=0.208 tol=8.35
2024-07-27 11:07:12,951 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.8 pTM=0.411 ipTM=0.211 tol=5.64
2024-07-27 11:07:42,973 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.1 pTM=0.421 ipTM=0.235 tol=4.1
2024-07-27 11:08:12,958 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.1 pTM=0.409 ipTM=0.211 tol=5.11
2024-07-27 11:08:42,953 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.6 pTM=0.408 ipTM=0.216 tol=4.02
2024-07-27 11:09:12,950 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.9 pTM=0.4 ipTM=0.198 tol=3.82
2024-07-27 11:09:42,992 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.4 pTM=0.402 ipTM=0.202 tol=2.62
2024-07-27 11:10:12,992 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.6 pTM=0.418 ipTM=0.298 tol=15.8
2024-07-27 11:10:42,991 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.9 pTM=0.399 ipTM=0.203 tol=7.89
2024-07-27 11:11:13,007 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.1 pTM=0.391 ipTM=0.202 tol=11.3
2024-07-27 11:11:43,015 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.3 pTM=0.401 ipTM=0.218 tol=9.79
2024-07-27 11:12:12,983 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.1 pTM=0.395 ipTM=0.196 tol=7.16
2024-07-27 11:12:42,938 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.2 pTM=0.405 ipTM=0.201 tol=2.83
2024-07-27 11:13:12,879 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70 pTM=0.403 ipTM=0.2 tol=4.48
2024-07-27 11:13:42,884 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.2 pTM=0.416 ipTM=0.211 tol=4.15
2024-07-27 11:14:12,836 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.9 pTM=0.408 ipTM=0.203 tol=4.21
2024-07-27 11:14:42,820 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.409 ipTM=0.22 tol=3.68
2024-07-27 11:15:12,788 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70 pTM=0.4 ipTM=0.19 tol=3.75
2024-07-27 11:15:42,770 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.1 pTM=0.41 ipTM=0.21 tol=3.21
2024-07-27 11:16:12,733 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.1 pTM=0.407 ipTM=0.228 tol=4.21
2024-07-27 11:16:42,692 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.2 pTM=0.411 ipTM=0.212 tol=3.48
2024-07-27 11:17:12,668 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.2 pTM=0.413 ipTM=0.215 tol=5.43
2024-07-27 11:17:42,632 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.6 pTM=0.415 ipTM=0.207 tol=6.46
2024-07-27 11:18:12,566 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.2 pTM=0.409 ipTM=0.222 tol=3.07
2024-07-27 11:18:12,567 alphafold2_multimer_v3_model_4_seed_000 took 929.4s (30 recycles)
2024-07-27 11:18:43,368 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.4 pTM=0.474 ipTM=0.455
2024-07-27 11:19:13,339 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.8 pTM=0.537 ipTM=0.504 tol=8.23
2024-07-27 11:19:43,293 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.8 pTM=0.519 ipTM=0.466 tol=4.78
2024-07-27 11:20:13,273 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.1 pTM=0.515 ipTM=0.438 tol=4.78
2024-07-27 11:20:43,289 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.1 pTM=0.49 ipTM=0.427 tol=5.02
2024-07-27 11:21:13,287 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.3 pTM=0.506 ipTM=0.433 tol=3.24
2024-07-27 11:21:43,293 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.4 pTM=0.487 ipTM=0.4 tol=6.46
2024-07-27 11:22:13,264 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.4 pTM=0.514 ipTM=0.442 tol=10.6
2024-07-27 11:22:43,254 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.4 pTM=0.507 ipTM=0.463 tol=5.02
2024-07-27 11:23:13,231 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.4 pTM=0.522 ipTM=0.475 tol=1.92
2024-07-27 11:23:43,184 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.4 pTM=0.513 ipTM=0.475 tol=2.07
2024-07-27 11:24:13,150 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.6 pTM=0.528 ipTM=0.495 tol=2.31
2024-07-27 11:24:43,106 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.5 pTM=0.513 ipTM=0.484 tol=5.8
2024-07-27 11:25:13,052 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.5 pTM=0.521 ipTM=0.489 tol=3.5
2024-07-27 11:25:42,979 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.5 pTM=0.512 ipTM=0.479 tol=2.65
2024-07-27 11:26:12,909 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.8 pTM=0.521 ipTM=0.496 tol=1.75
2024-07-27 11:26:42,825 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.5 pTM=0.509 ipTM=0.478 tol=3.16
2024-07-27 11:27:12,751 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.6 pTM=0.518 ipTM=0.487 tol=3.27
2024-07-27 11:27:42,685 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.5 pTM=0.511 ipTM=0.486 tol=6.43
2024-07-27 11:28:12,612 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.6 pTM=0.519 ipTM=0.493 tol=3.82
2024-07-27 11:28:42,560 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.6 pTM=0.515 ipTM=0.494 tol=4.07
2024-07-27 11:29:12,509 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.7 pTM=0.525 ipTM=0.5 tol=3.86
2024-07-27 11:29:42,454 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.6 pTM=0.511 ipTM=0.49 tol=6.26
2024-07-27 11:30:12,399 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.6 pTM=0.526 ipTM=0.508 tol=3.13
2024-07-27 11:30:42,372 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.7 pTM=0.513 ipTM=0.481 tol=3.55
2024-07-27 11:31:12,346 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.5 pTM=0.51 ipTM=0.474 tol=4.23
2024-07-27 11:31:42,321 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.2 pTM=0.5 ipTM=0.448 tol=3.75
2024-07-27 11:32:12,273 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.2 pTM=0.5 ipTM=0.447 tol=4.26
2024-07-27 11:32:42,247 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.2 pTM=0.492 ipTM=0.417 tol=4.93
2024-07-27 11:33:12,223 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.5 pTM=0.504 ipTM=0.433 tol=2.83
2024-07-27 11:33:42,213 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.5 pTM=0.491 ipTM=0.414 tol=3.23
2024-07-27 11:33:42,214 alphafold2_multimer_v3_model_5_seed_000 took 928.8s (30 recycles)
2024-07-27 11:33:43,088 reranking models by 'multimer' metric
2024-07-27 11:33:47,027 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 11:35:24,846 Relaxation took 101.8s
2024-07-27 11:35:24,846 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.1 pTM=0.52 ipTM=0.548
2024-07-27 11:37:47,121 Relaxation took 142.3s
2024-07-27 11:37:47,121 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.4 pTM=0.499 ipTM=0.508
2024-07-27 11:40:24,872 Relaxation took 157.7s
2024-07-27 11:40:24,872 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.9 pTM=0.465 ipTM=0.476
2024-07-27 11:43:38,100 Relaxation took 193.2s
2024-07-27 11:43:38,100 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.5 pTM=0.491 ipTM=0.414
2024-07-27 11:46:10,881 Relaxation took 152.8s
2024-07-27 11:46:10,881 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.2 pTM=0.409 ipTM=0.222
2024-07-27 11:46:13,198 Done