2024-07-27 10:09:02,180 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 10:09:02,549 Running on GPU
2024-07-27 10:09:05,311 Found 6 citations for tools or databases
2024-07-27 10:09:05,312 Query 1/1: RNF8_NEURL2 (length 770)
2024-07-27 10:09:05,792 Sleeping for 6s. Reason: PENDING
2024-07-27 10:09:12,207 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:09:17,623 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:09:28,048 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:09:38,466 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:09:48,876 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:09:55,301 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:10:00,718 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:10:11,156 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:10:17,569 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:10:22,985 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:10:31,432 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:10:42,459 Sleeping for 5s. Reason: PENDING
2024-07-27 10:10:47,874 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:10:58,302 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:11:03,725 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:11:09,144 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:11:15,562 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:11:26,670 Setting max_seq=508, max_extra_seq=2048
2024-07-27 10:14:32,167 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.2 pTM=0.415 ipTM=0.251
2024-07-27 10:14:44,247 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.9 pTM=0.424 ipTM=0.22 tol=8.45
2024-07-27 10:14:56,357 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65 pTM=0.418 ipTM=0.193 tol=7.34
2024-07-27 10:15:08,508 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.417 ipTM=0.197 tol=3.31
2024-07-27 10:15:20,659 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.4 pTM=0.414 ipTM=0.218 tol=3.35
2024-07-27 10:15:32,838 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.411 ipTM=0.23 tol=2.33
2024-07-27 10:15:45,016 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.5 pTM=0.417 ipTM=0.224 tol=8.91
2024-07-27 10:15:57,226 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.8 pTM=0.413 ipTM=0.198 tol=5.68
2024-07-27 10:16:09,436 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64 pTM=0.416 ipTM=0.214 tol=4.52
2024-07-27 10:16:21,644 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.2 pTM=0.427 ipTM=0.345 tol=5.51
2024-07-27 10:16:33,832 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.6 pTM=0.42 ipTM=0.33 tol=3.42
2024-07-27 10:16:46,057 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.1 pTM=0.411 ipTM=0.23 tol=4.37
2024-07-27 10:16:58,298 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.1 pTM=0.422 ipTM=0.224 tol=5.28
2024-07-27 10:17:10,534 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64 pTM=0.411 ipTM=0.205 tol=2.94
2024-07-27 10:17:22,760 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.2 pTM=0.435 ipTM=0.29 tol=4.11
2024-07-27 10:17:35,009 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.1 pTM=0.43 ipTM=0.267 tol=5.38
2024-07-27 10:17:47,244 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.4 pTM=0.452 ipTM=0.389 tol=4.65
2024-07-27 10:17:59,486 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.4 pTM=0.435 ipTM=0.306 tol=4.6
2024-07-27 10:18:11,733 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.1 pTM=0.433 ipTM=0.335 tol=2.87
2024-07-27 10:18:23,977 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.7 pTM=0.424 ipTM=0.254 tol=4.08
2024-07-27 10:18:36,205 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.4 pTM=0.441 ipTM=0.328 tol=3.91
2024-07-27 10:18:48,432 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.4 pTM=0.435 ipTM=0.264 tol=2.29
2024-07-27 10:19:00,670 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.1 pTM=0.441 ipTM=0.355 tol=5.18
2024-07-27 10:19:12,921 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.9 pTM=0.426 ipTM=0.247 tol=3.24
2024-07-27 10:19:25,163 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.4 pTM=0.436 ipTM=0.32 tol=3.5
2024-07-27 10:19:37,411 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.42 ipTM=0.277 tol=3.18
2024-07-27 10:19:49,676 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.6 pTM=0.415 ipTM=0.21 tol=6.62
2024-07-27 10:20:01,933 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.8 pTM=0.415 ipTM=0.218 tol=4.81
2024-07-27 10:20:14,171 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64 pTM=0.438 ipTM=0.362 tol=2.22
2024-07-27 10:20:26,417 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.8 pTM=0.438 ipTM=0.312 tol=3.68
2024-07-27 10:20:38,663 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.6 pTM=0.445 ipTM=0.401 tol=5.46
2024-07-27 10:20:38,664 alphafold2_multimer_v3_model_1_seed_000 took 547.1s (30 recycles)
2024-07-27 10:20:51,260 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.6 pTM=0.41 ipTM=0.218
2024-07-27 10:21:03,518 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.9 pTM=0.414 ipTM=0.262 tol=13.1
2024-07-27 10:21:15,749 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67 pTM=0.405 ipTM=0.249 tol=8.41
2024-07-27 10:21:28,006 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.2 pTM=0.413 ipTM=0.237 tol=5.69
2024-07-27 10:21:40,257 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.4 pTM=0.41 ipTM=0.195 tol=4.79
2024-07-27 10:21:52,498 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.7 pTM=0.408 ipTM=0.194 tol=4.97
2024-07-27 10:22:04,745 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.5 pTM=0.415 ipTM=0.214 tol=2.44
2024-07-27 10:22:16,974 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.9 pTM=0.442 ipTM=0.314 tol=2.73
2024-07-27 10:22:29,202 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.1 pTM=0.441 ipTM=0.385 tol=2.09
2024-07-27 10:22:41,440 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.4 pTM=0.453 ipTM=0.415 tol=1.43
2024-07-27 10:22:53,672 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.4 pTM=0.449 ipTM=0.433 tol=2.34
2024-07-27 10:23:05,892 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.5 pTM=0.454 ipTM=0.465 tol=0.971
2024-07-27 10:23:18,115 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.6 pTM=0.453 ipTM=0.48 tol=1.87
2024-07-27 10:23:30,328 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.5 pTM=0.453 ipTM=0.466 tol=1.4
2024-07-27 10:23:42,540 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.4 pTM=0.448 ipTM=0.48 tol=1.4
2024-07-27 10:23:54,717 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.2 pTM=0.446 ipTM=0.469 tol=1.1
2024-07-27 10:24:06,920 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.5 pTM=0.448 ipTM=0.482 tol=0.734
2024-07-27 10:24:19,110 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.1 pTM=0.447 ipTM=0.482 tol=1.12
2024-07-27 10:24:31,331 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.9 pTM=0.444 ipTM=0.465 tol=0.756
2024-07-27 10:24:43,553 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69 pTM=0.446 ipTM=0.485 tol=0.947
2024-07-27 10:24:55,776 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.1 pTM=0.452 ipTM=0.528 tol=18.4
2024-07-27 10:25:08,034 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.6 pTM=0.441 ipTM=0.496 tol=15.5
2024-07-27 10:25:20,279 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.6 pTM=0.442 ipTM=0.478 tol=8.65
2024-07-27 10:25:32,491 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.9 pTM=0.444 ipTM=0.448 tol=3.26
2024-07-27 10:25:44,705 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.3 pTM=0.452 ipTM=0.491 tol=2.62
2024-07-27 10:25:56,923 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.5 pTM=0.454 ipTM=0.516 tol=1.41
2024-07-27 10:26:09,150 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.4 pTM=0.452 ipTM=0.517 tol=1.21
2024-07-27 10:26:21,361 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.8 pTM=0.446 ipTM=0.505 tol=1.8
2024-07-27 10:26:33,577 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.9 pTM=0.445 ipTM=0.496 tol=1.39
2024-07-27 10:26:45,790 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.5 pTM=0.442 ipTM=0.477 tol=3.33
2024-07-27 10:26:58,011 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.8 pTM=0.44 ipTM=0.423 tol=4.44
2024-07-27 10:26:58,012 alphafold2_multimer_v3_model_2_seed_000 took 379.0s (30 recycles)
2024-07-27 10:27:10,597 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.2 pTM=0.385 ipTM=0.194
2024-07-27 10:27:22,844 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.4 pTM=0.395 ipTM=0.212 tol=10
2024-07-27 10:27:35,092 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.2 pTM=0.405 ipTM=0.173 tol=8.2
2024-07-27 10:27:47,339 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64 pTM=0.433 ipTM=0.457 tol=7.1
2024-07-27 10:27:59,584 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.4 pTM=0.401 ipTM=0.2 tol=9.25
2024-07-27 10:28:11,835 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.6 pTM=0.426 ipTM=0.393 tol=7.71
2024-07-27 10:28:24,088 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.3 pTM=0.404 ipTM=0.191 tol=6.64
2024-07-27 10:28:36,334 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.9 pTM=0.417 ipTM=0.355 tol=6.34
2024-07-27 10:28:48,602 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65 pTM=0.399 ipTM=0.192 tol=6.66
2024-07-27 10:29:00,832 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.4 pTM=0.436 ipTM=0.447 tol=5.82
2024-07-27 10:29:13,094 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.8 pTM=0.401 ipTM=0.193 tol=5.52
2024-07-27 10:29:25,330 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.2 pTM=0.444 ipTM=0.501 tol=6.26
2024-07-27 10:29:37,611 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.415 ipTM=0.186 tol=8.84
2024-07-27 10:29:49,889 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.4 pTM=0.412 ipTM=0.187 tol=3.16
2024-07-27 10:30:02,144 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.7 pTM=0.415 ipTM=0.204 tol=4.75
2024-07-27 10:30:14,427 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.3 pTM=0.42 ipTM=0.197 tol=2.95
2024-07-27 10:30:26,707 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.1 pTM=0.417 ipTM=0.203 tol=3.05
2024-07-27 10:30:38,969 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.6 pTM=0.43 ipTM=0.289 tol=3.46
2024-07-27 10:30:51,215 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63 pTM=0.432 ipTM=0.317 tol=18.1
2024-07-27 10:31:03,503 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.9 pTM=0.439 ipTM=0.421 tol=13.8
2024-07-27 10:31:15,817 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.4 pTM=0.406 ipTM=0.171 tol=9.17
2024-07-27 10:31:28,115 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.7 pTM=0.406 ipTM=0.179 tol=5.65
2024-07-27 10:31:40,411 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.4 pTM=0.417 ipTM=0.212 tol=4.61
2024-07-27 10:31:52,701 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.1 pTM=0.423 ipTM=0.291 tol=4.14
2024-07-27 10:32:04,986 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64 pTM=0.415 ipTM=0.222 tol=3.96
2024-07-27 10:32:17,280 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.2 pTM=0.416 ipTM=0.229 tol=2.23
2024-07-27 10:32:29,568 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.8 pTM=0.411 ipTM=0.217 tol=2.65
2024-07-27 10:32:41,849 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.5 pTM=0.417 ipTM=0.234 tol=2.53
2024-07-27 10:32:54,107 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.4 pTM=0.421 ipTM=0.275 tol=4.08
2024-07-27 10:33:06,371 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.9 pTM=0.425 ipTM=0.268 tol=1.9
2024-07-27 10:33:18,661 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.4 pTM=0.416 ipTM=0.24 tol=2.71
2024-07-27 10:33:18,662 alphafold2_multimer_v3_model_3_seed_000 took 380.3s (30 recycles)
2024-07-27 10:33:31,265 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.6 pTM=0.396 ipTM=0.229
2024-07-27 10:33:43,501 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.1 pTM=0.453 ipTM=0.581 tol=7.65
2024-07-27 10:33:55,747 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.2 pTM=0.408 ipTM=0.229 tol=9.32
2024-07-27 10:34:07,990 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.3 pTM=0.415 ipTM=0.256 tol=4.79
2024-07-27 10:34:20,228 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64 pTM=0.417 ipTM=0.25 tol=3.46
2024-07-27 10:34:32,466 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.4 pTM=0.415 ipTM=0.222 tol=3.26
2024-07-27 10:34:44,728 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.3 pTM=0.41 ipTM=0.211 tol=4.2
2024-07-27 10:34:56,968 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.8 pTM=0.41 ipTM=0.213 tol=3.29
2024-07-27 10:35:09,225 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.7 pTM=0.42 ipTM=0.272 tol=4.38
2024-07-27 10:35:21,454 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.6 pTM=0.421 ipTM=0.227 tol=14.6
2024-07-27 10:35:33,719 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.6 pTM=0.421 ipTM=0.213 tol=10
2024-07-27 10:35:45,933 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61 pTM=0.423 ipTM=0.227 tol=10
2024-07-27 10:35:58,204 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.6 pTM=0.412 ipTM=0.193 tol=14.4
2024-07-27 10:36:10,464 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.2 pTM=0.419 ipTM=0.313 tol=6.75
2024-07-27 10:36:22,718 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.6 pTM=0.416 ipTM=0.203 tol=12
2024-07-27 10:36:34,982 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62 pTM=0.414 ipTM=0.222 tol=9.79
2024-07-27 10:36:47,274 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.5 pTM=0.415 ipTM=0.203 tol=4.36
2024-07-27 10:36:59,548 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.1 pTM=0.416 ipTM=0.227 tol=5.49
2024-07-27 10:37:11,836 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.4 pTM=0.417 ipTM=0.211 tol=5.62
2024-07-27 10:37:24,114 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.5 pTM=0.419 ipTM=0.22 tol=5.62
2024-07-27 10:37:36,395 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.8 pTM=0.416 ipTM=0.215 tol=4.81
2024-07-27 10:37:48,686 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.1 pTM=0.418 ipTM=0.222 tol=3.59
2024-07-27 10:38:00,956 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.2 pTM=0.42 ipTM=0.227 tol=4.26
2024-07-27 10:38:13,244 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.6 pTM=0.415 ipTM=0.207 tol=6.23
2024-07-27 10:38:25,499 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.6 pTM=0.429 ipTM=0.228 tol=13.7
2024-07-27 10:38:37,799 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.5 pTM=0.426 ipTM=0.241 tol=12.9
2024-07-27 10:38:50,082 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.5 pTM=0.413 ipTM=0.234 tol=9.81
2024-07-27 10:39:02,383 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63 pTM=0.417 ipTM=0.216 tol=7.07
2024-07-27 10:39:14,676 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.1 pTM=0.436 ipTM=0.417 tol=8.95
2024-07-27 10:39:26,976 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.5 pTM=0.417 ipTM=0.213 tol=10.1
2024-07-27 10:39:39,276 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.6 pTM=0.417 ipTM=0.253 tol=7.34
2024-07-27 10:39:39,276 alphafold2_multimer_v3_model_4_seed_000 took 380.2s (30 recycles)
2024-07-27 10:39:51,929 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.1 pTM=0.398 ipTM=0.222
2024-07-27 10:40:04,233 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.6 pTM=0.389 ipTM=0.183 tol=8.4
2024-07-27 10:40:16,564 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.7 pTM=0.402 ipTM=0.186 tol=8.01
2024-07-27 10:40:28,882 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.8 pTM=0.398 ipTM=0.179 tol=6.59
2024-07-27 10:40:41,200 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.3 pTM=0.394 ipTM=0.208 tol=4.38
2024-07-27 10:40:53,507 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.392 ipTM=0.194 tol=7.61
2024-07-27 10:41:05,810 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.7 pTM=0.401 ipTM=0.201 tol=6.75
2024-07-27 10:41:18,092 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.8 pTM=0.394 ipTM=0.212 tol=6.05
2024-07-27 10:41:30,369 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.2 pTM=0.414 ipTM=0.207 tol=3.56
2024-07-27 10:41:42,647 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62 pTM=0.406 ipTM=0.184 tol=7
2024-07-27 10:41:54,931 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.6 pTM=0.412 ipTM=0.21 tol=3.08
2024-07-27 10:42:07,211 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.6 pTM=0.412 ipTM=0.214 tol=3.12
2024-07-27 10:42:19,498 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.6 pTM=0.412 ipTM=0.199 tol=2.52
2024-07-27 10:42:31,792 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.5 pTM=0.406 ipTM=0.187 tol=2.97
2024-07-27 10:42:44,054 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.6 pTM=0.407 ipTM=0.192 tol=3.38
2024-07-27 10:42:56,343 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.5 pTM=0.411 ipTM=0.234 tol=3.66
2024-07-27 10:43:08,637 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.7 pTM=0.41 ipTM=0.223 tol=2.36
2024-07-27 10:43:20,927 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.6 pTM=0.408 ipTM=0.187 tol=3.68
2024-07-27 10:43:33,198 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.8 pTM=0.425 ipTM=0.303 tol=6.39
2024-07-27 10:43:45,474 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.4 pTM=0.406 ipTM=0.191 tol=5.27
2024-07-27 10:43:57,715 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.6 pTM=0.44 ipTM=0.482 tol=5.69
2024-07-27 10:44:10,005 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.4 pTM=0.402 ipTM=0.192 tol=3.28
2024-07-27 10:44:22,290 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.2 pTM=0.409 ipTM=0.221 tol=2.79
2024-07-27 10:44:34,559 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.409 ipTM=0.236 tol=2.51
2024-07-27 10:44:46,834 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.3 pTM=0.412 ipTM=0.251 tol=2.67
2024-07-27 10:44:59,101 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.5 pTM=0.403 ipTM=0.203 tol=3.01
2024-07-27 10:45:11,375 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.7 pTM=0.405 ipTM=0.213 tol=3.9
2024-07-27 10:45:23,638 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61 pTM=0.423 ipTM=0.433 tol=4.71
2024-07-27 10:45:35,902 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.2 pTM=0.399 ipTM=0.188 tol=4.29
2024-07-27 10:45:48,171 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.9 pTM=0.402 ipTM=0.234 tol=3.31
2024-07-27 10:46:00,450 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.2 pTM=0.399 ipTM=0.178 tol=3.35
2024-07-27 10:46:00,451 alphafold2_multimer_v3_model_5_seed_000 took 380.8s (30 recycles)
2024-07-27 10:46:00,829 reranking models by 'multimer' metric
2024-07-27 10:46:03,745 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 10:46:58,717 Relaxation took 57.9s
2024-07-27 10:46:58,717 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.8 pTM=0.44 ipTM=0.423
2024-07-27 10:47:58,010 Relaxation took 59.3s
2024-07-27 10:47:58,010 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.6 pTM=0.445 ipTM=0.401
2024-07-27 10:48:49,234 Relaxation took 51.2s
2024-07-27 10:48:49,234 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.6 pTM=0.417 ipTM=0.253
2024-07-27 10:49:41,400 Relaxation took 52.2s
2024-07-27 10:49:41,401 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.4 pTM=0.416 ipTM=0.24
2024-07-27 10:50:42,687 Relaxation took 61.3s
2024-07-27 10:50:42,687 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.2 pTM=0.399 ipTM=0.178
2024-07-27 10:50:44,120 Done