2024-07-27 10:12:05,789 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 10:12:06,132 Running on GPU
2024-07-27 10:12:10,276 Found 6 citations for tools or databases
2024-07-27 10:12:10,277 Query 1/1: RNF8_RAB40C (length 766)
2024-07-27 10:12:10,735 Sleeping for 6s. Reason: PENDING
2024-07-27 10:12:17,189 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:12:27,631 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:12:35,056 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:12:45,484 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:12:54,904 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:13:00,309 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:13:05,732 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:13:15,142 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:13:22,558 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:13:31,979 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:13:41,401 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:13:46,830 Sleeping for 8s. Reason: RUNNING
2024-07-27 10:13:55,282 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:14:05,703 Sleeping for 6s. Reason: RUNNING
2024-07-27 10:14:12,139 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:14:22,586 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:14:29,907 Sleeping for 7s. Reason: PENDING
2024-07-27 10:14:37,330 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:14:44,753 Sleeping for 9s. Reason: RUNNING
2024-07-27 10:14:54,186 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:15:04,606 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:15:10,011 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:15:17,428 Sleeping for 10s. Reason: RUNNING
2024-07-27 10:15:27,857 Sleeping for 7s. Reason: RUNNING
2024-07-27 10:15:35,274 Sleeping for 5s. Reason: RUNNING
2024-07-27 10:15:44,051 Setting max_seq=508, max_extra_seq=2048
2024-07-27 10:18:43,651 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.3 pTM=0.402 ipTM=0.462
2024-07-27 10:18:55,354 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.9 pTM=0.35 ipTM=0.29 tol=11.8
2024-07-27 10:19:07,094 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.4 pTM=0.337 ipTM=0.281 tol=7.53
2024-07-27 10:19:18,861 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.3 pTM=0.329 ipTM=0.248 tol=4.98
2024-07-27 10:19:30,625 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.1 pTM=0.324 ipTM=0.244 tol=2.22
2024-07-27 10:19:42,406 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.4 pTM=0.325 ipTM=0.246 tol=3.16
2024-07-27 10:19:54,196 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59 pTM=0.322 ipTM=0.246 tol=5.01
2024-07-27 10:20:05,988 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.5 pTM=0.333 ipTM=0.271 tol=6.38
2024-07-27 10:20:17,780 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.5 pTM=0.335 ipTM=0.273 tol=2.3
2024-07-27 10:20:29,583 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60 pTM=0.345 ipTM=0.313 tol=4.05
2024-07-27 10:20:41,382 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.3 pTM=0.343 ipTM=0.293 tol=3.7
2024-07-27 10:20:53,205 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.2 pTM=0.346 ipTM=0.308 tol=1.65
2024-07-27 10:21:05,024 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.3 pTM=0.344 ipTM=0.3 tol=1.48
2024-07-27 10:21:16,841 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.2 pTM=0.346 ipTM=0.315 tol=2.01
2024-07-27 10:21:28,668 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.342 ipTM=0.31 tol=1.52
2024-07-27 10:21:40,491 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.1 pTM=0.342 ipTM=0.308 tol=1.55
2024-07-27 10:21:52,276 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.6 pTM=0.344 ipTM=0.303 tol=1.86
2024-07-27 10:22:04,059 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60 pTM=0.337 ipTM=0.285 tol=1.7
2024-07-27 10:22:15,845 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.8 pTM=0.333 ipTM=0.282 tol=1.94
2024-07-27 10:22:27,673 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.3 pTM=0.339 ipTM=0.29 tol=2.16
2024-07-27 10:22:39,509 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.7 pTM=0.341 ipTM=0.297 tol=1.56
2024-07-27 10:22:51,345 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.3 pTM=0.346 ipTM=0.321 tol=1.56
2024-07-27 10:23:03,168 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.4 pTM=0.348 ipTM=0.322 tol=1.97
2024-07-27 10:23:15,010 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.2 pTM=0.35 ipTM=0.328 tol=1.73
2024-07-27 10:23:26,842 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.2 pTM=0.347 ipTM=0.32 tol=1.48
2024-07-27 10:23:38,683 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.35 ipTM=0.325 tol=1.29
2024-07-27 10:23:50,498 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.9 pTM=0.346 ipTM=0.308 tol=1.44
2024-07-27 10:24:02,321 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.9 pTM=0.347 ipTM=0.32 tol=3.22
2024-07-27 10:24:14,136 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.2 pTM=0.351 ipTM=0.332 tol=2.63
2024-07-27 10:24:25,946 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.2 pTM=0.355 ipTM=0.343 tol=1.26
2024-07-27 10:24:37,760 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.9 pTM=0.347 ipTM=0.334 tol=3.26
2024-07-27 10:24:37,761 alphafold2_multimer_v3_model_1_seed_000 took 530.3s (30 recycles)
2024-07-27 10:24:49,859 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.3 pTM=0.37 ipTM=0.315
2024-07-27 10:25:01,594 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.1 pTM=0.345 ipTM=0.25 tol=5.61
2024-07-27 10:25:13,332 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.8 pTM=0.362 ipTM=0.287 tol=6.52
2024-07-27 10:25:25,072 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.4 pTM=0.354 ipTM=0.27 tol=14.9
2024-07-27 10:25:36,819 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62 pTM=0.343 ipTM=0.254 tol=7.52
2024-07-27 10:25:48,569 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.3 pTM=0.332 ipTM=0.24 tol=2.94
2024-07-27 10:26:00,325 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.7 pTM=0.36 ipTM=0.309 tol=4.13
2024-07-27 10:26:12,075 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63 pTM=0.369 ipTM=0.335 tol=2.72
2024-07-27 10:26:23,830 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.2 pTM=0.355 ipTM=0.312 tol=2.18
2024-07-27 10:26:35,594 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.7 pTM=0.345 ipTM=0.281 tol=2.21
2024-07-27 10:26:47,361 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.9 pTM=0.369 ipTM=0.347 tol=2.4
2024-07-27 10:26:59,121 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.6 pTM=0.383 ipTM=0.378 tol=1.88
2024-07-27 10:27:10,870 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.6 pTM=0.382 ipTM=0.385 tol=1.23
2024-07-27 10:27:22,629 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.371 ipTM=0.359 tol=2.25
2024-07-27 10:27:34,393 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.5 pTM=0.362 ipTM=0.325 tol=1.78
2024-07-27 10:27:46,156 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.1 pTM=0.352 ipTM=0.3 tol=1.51
2024-07-27 10:27:57,926 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.7 pTM=0.365 ipTM=0.33 tol=1.32
2024-07-27 10:28:09,728 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.9 pTM=0.367 ipTM=0.337 tol=1.57
2024-07-27 10:28:21,530 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.5 pTM=0.364 ipTM=0.332 tol=1.92
2024-07-27 10:28:33,333 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.4 pTM=0.357 ipTM=0.313 tol=1.9
2024-07-27 10:28:45,125 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.5 pTM=0.361 ipTM=0.32 tol=1.68
2024-07-27 10:28:56,919 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.3 pTM=0.358 ipTM=0.317 tol=1.37
2024-07-27 10:29:08,718 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.8 pTM=0.35 ipTM=0.299 tol=2
2024-07-27 10:29:20,512 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.8 pTM=0.352 ipTM=0.296 tol=2.03
2024-07-27 10:29:32,306 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.6 pTM=0.369 ipTM=0.346 tol=2.52
2024-07-27 10:29:44,091 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.9 pTM=0.37 ipTM=0.34 tol=1.6
2024-07-27 10:29:55,888 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.3 pTM=0.361 ipTM=0.323 tol=1.6
2024-07-27 10:30:07,680 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.4 pTM=0.36 ipTM=0.313 tol=1.88
2024-07-27 10:30:19,483 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.4 pTM=0.363 ipTM=0.33 tol=1.58
2024-07-27 10:30:31,290 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.3 pTM=0.361 ipTM=0.321 tol=1.26
2024-07-27 10:30:43,101 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62 pTM=0.353 ipTM=0.297 tol=2.95
2024-07-27 10:30:43,102 alphafold2_multimer_v3_model_2_seed_000 took 365.0s (30 recycles)
2024-07-27 10:30:55,292 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.3 pTM=0.306 ipTM=0.172
2024-07-27 10:31:07,103 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.9 pTM=0.307 ipTM=0.156 tol=7.27
2024-07-27 10:31:18,920 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.1 pTM=0.307 ipTM=0.158 tol=4.81
2024-07-27 10:31:30,738 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.311 ipTM=0.164 tol=3.71
2024-07-27 10:31:42,576 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59 pTM=0.309 ipTM=0.169 tol=4.71
2024-07-27 10:31:54,410 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.1 pTM=0.313 ipTM=0.176 tol=3.6
2024-07-27 10:32:06,229 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59 pTM=0.309 ipTM=0.178 tol=3.38
2024-07-27 10:32:18,065 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.9 pTM=0.312 ipTM=0.177 tol=4
2024-07-27 10:32:29,901 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59 pTM=0.308 ipTM=0.174 tol=1.75
2024-07-27 10:32:41,733 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59 pTM=0.31 ipTM=0.168 tol=2.91
2024-07-27 10:32:53,571 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59 pTM=0.306 ipTM=0.169 tol=2.98
2024-07-27 10:33:05,401 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59 pTM=0.313 ipTM=0.171 tol=3.14
2024-07-27 10:33:17,239 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59 pTM=0.309 ipTM=0.173 tol=1.86
2024-07-27 10:33:29,066 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.1 pTM=0.316 ipTM=0.176 tol=3.16
2024-07-27 10:33:40,896 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.3 pTM=0.316 ipTM=0.19 tol=3
2024-07-27 10:33:52,724 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.2 pTM=0.312 ipTM=0.174 tol=2.79
2024-07-27 10:34:04,519 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.2 pTM=0.306 ipTM=0.167 tol=4.16
2024-07-27 10:34:16,333 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.2 pTM=0.31 ipTM=0.17 tol=3.59
2024-07-27 10:34:28,118 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.9 pTM=0.305 ipTM=0.162 tol=2.93
2024-07-27 10:34:39,903 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.9 pTM=0.307 ipTM=0.162 tol=5.01
2024-07-27 10:34:51,709 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.9 pTM=0.306 ipTM=0.168 tol=5.26
2024-07-27 10:35:03,528 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.9 pTM=0.308 ipTM=0.16 tol=2.15
2024-07-27 10:35:15,357 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.7 pTM=0.303 ipTM=0.16 tol=5.92
2024-07-27 10:35:27,175 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.6 pTM=0.306 ipTM=0.163 tol=5.73
2024-07-27 10:35:38,999 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.1 pTM=0.31 ipTM=0.168 tol=4.09
2024-07-27 10:35:50,819 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.9 pTM=0.308 ipTM=0.171 tol=2.42
2024-07-27 10:36:02,642 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.9 pTM=0.31 ipTM=0.175 tol=2.41
2024-07-27 10:36:14,469 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.8 pTM=0.309 ipTM=0.169 tol=2.08
2024-07-27 10:36:26,302 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.6 pTM=0.306 ipTM=0.166 tol=2.8
2024-07-27 10:36:38,128 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.5 pTM=0.308 ipTM=0.162 tol=3.4
2024-07-27 10:36:49,959 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.6 pTM=0.31 ipTM=0.164 tol=2.49
2024-07-27 10:36:49,959 alphafold2_multimer_v3_model_3_seed_000 took 366.5s (30 recycles)
2024-07-27 10:37:02,147 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.4 pTM=0.328 ipTM=0.228
2024-07-27 10:37:13,964 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.6 pTM=0.344 ipTM=0.259 tol=10.6
2024-07-27 10:37:25,757 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.5 pTM=0.387 ipTM=0.317 tol=4.44
2024-07-27 10:37:37,568 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.9 pTM=0.353 ipTM=0.281 tol=2.4
2024-07-27 10:37:49,393 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.1 pTM=0.332 ipTM=0.245 tol=3.91
2024-07-27 10:38:01,207 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.2 pTM=0.335 ipTM=0.26 tol=5.73
2024-07-27 10:38:13,035 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.9 pTM=0.324 ipTM=0.252 tol=5.52
2024-07-27 10:38:24,841 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.2 pTM=0.326 ipTM=0.247 tol=6.64
2024-07-27 10:38:36,664 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.8 pTM=0.329 ipTM=0.268 tol=3.86
2024-07-27 10:38:48,475 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.2 pTM=0.324 ipTM=0.239 tol=3.8
2024-07-27 10:39:00,295 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.2 pTM=0.328 ipTM=0.254 tol=4.69
2024-07-27 10:39:12,115 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.2 pTM=0.325 ipTM=0.243 tol=4.79
2024-07-27 10:39:23,926 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.5 pTM=0.324 ipTM=0.246 tol=2.29
2024-07-27 10:39:35,738 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.4 pTM=0.324 ipTM=0.249 tol=3.16
2024-07-27 10:39:47,562 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57 pTM=0.326 ipTM=0.258 tol=7.21
2024-07-27 10:39:59,367 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.4 pTM=0.336 ipTM=0.247 tol=5.2
2024-07-27 10:40:11,158 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.1 pTM=0.334 ipTM=0.241 tol=3.26
2024-07-27 10:40:22,944 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.4 pTM=0.324 ipTM=0.237 tol=2.98
2024-07-27 10:40:34,771 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.7 pTM=0.322 ipTM=0.246 tol=4.73
2024-07-27 10:40:46,578 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.3 pTM=0.323 ipTM=0.237 tol=4
2024-07-27 10:40:58,389 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.2 pTM=0.319 ipTM=0.231 tol=2.33
2024-07-27 10:41:10,180 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.1 pTM=0.313 ipTM=0.217 tol=2.16
2024-07-27 10:41:21,995 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.9 pTM=0.312 ipTM=0.214 tol=3.2
2024-07-27 10:41:33,800 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.1 pTM=0.316 ipTM=0.22 tol=3.78
2024-07-27 10:41:45,621 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.1 pTM=0.312 ipTM=0.211 tol=4.64
2024-07-27 10:41:57,431 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.1 pTM=0.312 ipTM=0.212 tol=2.96
2024-07-27 10:42:09,242 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.8 pTM=0.309 ipTM=0.204 tol=3.37
2024-07-27 10:42:21,042 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56 pTM=0.33 ipTM=0.241 tol=5.17
2024-07-27 10:42:32,834 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.5 pTM=0.337 ipTM=0.256 tol=4.07
2024-07-27 10:42:44,642 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.2 pTM=0.326 ipTM=0.233 tol=3.11
2024-07-27 10:42:56,456 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.8 pTM=0.323 ipTM=0.223 tol=2.73
2024-07-27 10:42:56,457 alphafold2_multimer_v3_model_4_seed_000 took 366.1s (30 recycles)
2024-07-27 10:43:08,646 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.1 pTM=0.358 ipTM=0.316
2024-07-27 10:43:20,454 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.2 pTM=0.371 ipTM=0.343 tol=8.45
2024-07-27 10:43:32,279 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.366 ipTM=0.328 tol=5.66
2024-07-27 10:43:44,119 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.7 pTM=0.346 ipTM=0.261 tol=4.62
2024-07-27 10:43:55,982 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.7 pTM=0.329 ipTM=0.226 tol=5.04
2024-07-27 10:44:07,863 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57 pTM=0.319 ipTM=0.206 tol=3.67
2024-07-27 10:44:19,736 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.3 pTM=0.319 ipTM=0.206 tol=5.89
2024-07-27 10:44:31,623 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.3 pTM=0.312 ipTM=0.186 tol=5.73
2024-07-27 10:44:43,484 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.9 pTM=0.32 ipTM=0.215 tol=3.65
2024-07-27 10:44:55,363 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.3 pTM=0.311 ipTM=0.195 tol=4.14
2024-07-27 10:45:07,228 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56 pTM=0.32 ipTM=0.216 tol=3.68
2024-07-27 10:45:19,106 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.2 pTM=0.312 ipTM=0.19 tol=1.64
2024-07-27 10:45:30,976 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.8 pTM=0.316 ipTM=0.198 tol=2.84
2024-07-27 10:45:42,851 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.8 pTM=0.312 ipTM=0.186 tol=5.52
2024-07-27 10:45:54,741 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.6 pTM=0.318 ipTM=0.207 tol=3.71
2024-07-27 10:46:06,611 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.1 pTM=0.31 ipTM=0.185 tol=6.86
2024-07-27 10:46:18,495 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.7 pTM=0.318 ipTM=0.217 tol=5.82
2024-07-27 10:46:30,362 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.1 pTM=0.313 ipTM=0.194 tol=2.29
2024-07-27 10:46:42,247 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.8 pTM=0.313 ipTM=0.195 tol=4.91
2024-07-27 10:46:54,130 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.1 pTM=0.311 ipTM=0.183 tol=2.41
2024-07-27 10:47:06,019 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.8 pTM=0.318 ipTM=0.21 tol=5.24
2024-07-27 10:47:17,915 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.2 pTM=0.311 ipTM=0.181 tol=5.05
2024-07-27 10:47:29,788 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.8 pTM=0.313 ipTM=0.2 tol=3.99
2024-07-27 10:47:41,673 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.6 pTM=0.311 ipTM=0.183 tol=4.04
2024-07-27 10:47:53,548 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.8 pTM=0.316 ipTM=0.203 tol=4.96
2024-07-27 10:48:05,436 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.1 pTM=0.309 ipTM=0.178 tol=3.21
2024-07-27 10:48:17,305 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.9 pTM=0.317 ipTM=0.217 tol=6.13
2024-07-27 10:48:29,203 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.9 pTM=0.311 ipTM=0.186 tol=3.47
2024-07-27 10:48:41,080 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.8 pTM=0.316 ipTM=0.209 tol=2.94
2024-07-27 10:48:52,967 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.7 pTM=0.311 ipTM=0.184 tol=2.01
2024-07-27 10:49:04,860 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.8 pTM=0.317 ipTM=0.204 tol=3.01
2024-07-27 10:49:04,860 alphafold2_multimer_v3_model_5_seed_000 took 368.0s (30 recycles)
2024-07-27 10:49:05,237 reranking models by 'multimer' metric
2024-07-27 10:49:06,127 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 10:49:30,778 Relaxation took 25.5s
2024-07-27 10:49:30,778 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.9 pTM=0.347 ipTM=0.334
2024-07-27 10:50:28,123 Relaxation took 57.3s
2024-07-27 10:50:28,123 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62 pTM=0.353 ipTM=0.297
2024-07-27 10:51:22,179 Relaxation took 54.1s
2024-07-27 10:51:22,179 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.8 pTM=0.323 ipTM=0.223
2024-07-27 10:52:11,169 Relaxation took 49.0s
2024-07-27 10:52:11,169 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.8 pTM=0.317 ipTM=0.204
2024-07-27 10:53:11,666 Relaxation took 60.5s
2024-07-27 10:53:11,666 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.6 pTM=0.31 ipTM=0.164
2024-07-27 10:53:13,127 Done