2024-07-27 10:41:35,463 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 10:41:35,782 Running on GPU 2024-07-27 10:41:39,291 Found 6 citations for tools or databases 2024-07-27 10:41:39,291 Query 1/1: SLBP_COPS8 (length 479) 2024-07-27 10:41:39,742 Sleeping for 7s. Reason: PENDING 2024-07-27 10:41:47,182 Sleeping for 5s. Reason: RUNNING 2024-07-27 10:41:52,608 Sleeping for 8s. Reason: RUNNING 2024-07-27 10:42:01,082 Sleeping for 10s. Reason: RUNNING 2024-07-27 10:42:11,507 Sleeping for 8s. Reason: RUNNING 2024-07-27 10:42:21,287 Sleeping for 8s. Reason: PENDING 2024-07-27 10:42:29,710 Sleeping for 6s. Reason: RUNNING 2024-07-27 10:42:36,118 Sleeping for 8s. Reason: RUNNING 2024-07-27 10:42:44,541 Sleeping for 5s. Reason: RUNNING 2024-07-27 10:42:51,413 Setting max_seq=508, max_extra_seq=2048 2024-07-27 10:45:36,145 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.2 pTM=0.434 ipTM=0.198 2024-07-27 10:45:41,063 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.7 pTM=0.446 ipTM=0.279 tol=18.2 2024-07-27 10:45:45,984 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.6 pTM=0.494 ipTM=0.539 tol=10 2024-07-27 10:45:50,896 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.522 ipTM=0.597 tol=3.3 2024-07-27 10:45:55,806 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.3 pTM=0.51 ipTM=0.56 tol=4.25 2024-07-27 10:46:00,715 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.3 pTM=0.516 ipTM=0.575 tol=2.95 2024-07-27 10:46:05,628 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.2 pTM=0.511 ipTM=0.561 tol=6.34 2024-07-27 10:46:10,533 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.1 pTM=0.505 ipTM=0.548 tol=4.53 2024-07-27 10:46:15,448 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.8 pTM=0.495 ipTM=0.518 tol=2.94 2024-07-27 10:46:20,359 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.3 pTM=0.507 ipTM=0.554 tol=4.99 2024-07-27 10:46:25,273 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.6 pTM=0.506 ipTM=0.559 tol=2.45 2024-07-27 10:46:30,179 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.6 pTM=0.513 ipTM=0.573 tol=1.94 2024-07-27 10:46:35,099 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.1 pTM=0.53 ipTM=0.614 tol=1.46 2024-07-27 10:46:40,014 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.1 pTM=0.528 ipTM=0.618 tol=2.11 2024-07-27 10:46:44,931 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.9 pTM=0.523 ipTM=0.607 tol=2.78 2024-07-27 10:46:49,844 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.7 pTM=0.523 ipTM=0.616 tol=3.69 2024-07-27 10:46:54,769 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.4 pTM=0.533 ipTM=0.63 tol=3.61 2024-07-27 10:46:59,689 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.1 pTM=0.531 ipTM=0.626 tol=4.76 2024-07-27 10:47:04,614 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.2 pTM=0.531 ipTM=0.629 tol=4.53 2024-07-27 10:47:09,533 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.3 pTM=0.535 ipTM=0.639 tol=3.73 2024-07-27 10:47:14,458 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.3 pTM=0.532 ipTM=0.633 tol=2.25 2024-07-27 10:47:19,379 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.1 pTM=0.526 ipTM=0.624 tol=1.93 2024-07-27 10:47:24,297 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.529 ipTM=0.632 tol=3.37 2024-07-27 10:47:29,216 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.1 pTM=0.528 ipTM=0.627 tol=2.23 2024-07-27 10:47:34,141 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.1 pTM=0.529 ipTM=0.627 tol=3.25 2024-07-27 10:47:39,065 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.2 pTM=0.534 ipTM=0.646 tol=2.55 2024-07-27 10:47:43,993 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.4 pTM=0.533 ipTM=0.644 tol=5.59 2024-07-27 10:47:48,917 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.3 pTM=0.533 ipTM=0.644 tol=1.7 2024-07-27 10:47:53,843 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.1 pTM=0.532 ipTM=0.637 tol=1.47 2024-07-27 10:47:58,770 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.5 pTM=0.534 ipTM=0.643 tol=1.62 2024-07-27 10:48:03,699 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.5 pTM=0.532 ipTM=0.639 tol=4.05 2024-07-27 10:48:03,700 alphafold2_multimer_v3_model_1_seed_000 took 307.4s (30 recycles) 2024-07-27 10:48:08,811 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.8 pTM=0.408 ipTM=0.147 2024-07-27 10:48:13,769 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.9 pTM=0.402 ipTM=0.126 tol=12.6 2024-07-27 10:48:18,716 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.3 pTM=0.397 ipTM=0.133 tol=8.62 2024-07-27 10:48:23,666 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.9 pTM=0.402 ipTM=0.133 tol=7.15 2024-07-27 10:48:28,622 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.3 pTM=0.406 ipTM=0.136 tol=5.97 2024-07-27 10:48:33,575 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.2 pTM=0.405 ipTM=0.144 tol=7 2024-07-27 10:48:38,542 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.2 pTM=0.406 ipTM=0.143 tol=3.99 2024-07-27 10:48:43,499 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.4 pTM=0.404 ipTM=0.14 tol=5.66 2024-07-27 10:48:48,464 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.3 pTM=0.404 ipTM=0.14 tol=2.21 2024-07-27 10:48:53,422 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.4 pTM=0.404 ipTM=0.139 tol=4.09 2024-07-27 10:48:58,384 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.3 pTM=0.406 ipTM=0.14 tol=4.58 2024-07-27 10:49:03,341 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60 pTM=0.406 ipTM=0.137 tol=3.3 2024-07-27 10:49:08,302 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60 pTM=0.407 ipTM=0.137 tol=3.16 2024-07-27 10:49:13,255 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.1 pTM=0.403 ipTM=0.139 tol=3.9 2024-07-27 10:49:18,217 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.2 pTM=0.406 ipTM=0.143 tol=4.02 2024-07-27 10:49:23,172 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60 pTM=0.404 ipTM=0.135 tol=5.17 2024-07-27 10:49:28,129 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60 pTM=0.406 ipTM=0.135 tol=4.06 2024-07-27 10:49:33,089 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.2 pTM=0.404 ipTM=0.13 tol=4.2 2024-07-27 10:49:38,046 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.4 pTM=0.401 ipTM=0.141 tol=5.45 2024-07-27 10:49:43,007 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.7 pTM=0.403 ipTM=0.146 tol=4.91 2024-07-27 10:49:47,961 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.7 pTM=0.4 ipTM=0.141 tol=2.1 2024-07-27 10:49:52,909 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.4 pTM=0.407 ipTM=0.152 tol=4.61 2024-07-27 10:49:57,853 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.3 pTM=0.403 ipTM=0.134 tol=4.69 2024-07-27 10:50:02,804 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.1 pTM=0.404 ipTM=0.14 tol=6.98 2024-07-27 10:50:07,752 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.6 pTM=0.402 ipTM=0.136 tol=4.89 2024-07-27 10:50:12,718 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.4 pTM=0.403 ipTM=0.14 tol=3.31 2024-07-27 10:50:17,674 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.2 pTM=0.403 ipTM=0.128 tol=4.84 2024-07-27 10:50:22,630 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.2 pTM=0.406 ipTM=0.148 tol=2.95 2024-07-27 10:50:27,583 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.2 pTM=0.401 ipTM=0.142 tol=2.58 2024-07-27 10:50:32,543 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.4 pTM=0.406 ipTM=0.14 tol=2.13 2024-07-27 10:50:37,499 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.6 pTM=0.405 ipTM=0.14 tol=1.35 2024-07-27 10:50:37,500 alphafold2_multimer_v3_model_2_seed_000 took 153.6s (30 recycles) 2024-07-27 10:50:42,627 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.5 pTM=0.424 ipTM=0.205 2024-07-27 10:50:47,589 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.2 pTM=0.413 ipTM=0.165 tol=12.5 2024-07-27 10:50:52,561 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.1 pTM=0.403 ipTM=0.124 tol=5.11 2024-07-27 10:50:57,533 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57 pTM=0.413 ipTM=0.177 tol=7.32 2024-07-27 10:51:02,506 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.6 pTM=0.411 ipTM=0.153 tol=6.4 2024-07-27 10:51:07,466 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.4 pTM=0.427 ipTM=0.243 tol=6.17 2024-07-27 10:51:12,449 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.2 pTM=0.399 ipTM=0.115 tol=6.66 2024-07-27 10:51:17,411 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.7 pTM=0.412 ipTM=0.192 tol=4.14 2024-07-27 10:51:22,395 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.8 pTM=0.406 ipTM=0.123 tol=5.61 2024-07-27 10:51:27,363 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.6 pTM=0.42 ipTM=0.201 tol=5.18 2024-07-27 10:51:32,342 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.6 pTM=0.405 ipTM=0.128 tol=7.84 2024-07-27 10:51:37,305 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.3 pTM=0.427 ipTM=0.259 tol=4.42 2024-07-27 10:51:42,285 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57 pTM=0.403 ipTM=0.12 tol=4.57 2024-07-27 10:51:47,246 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.6 pTM=0.405 ipTM=0.148 tol=4.55 2024-07-27 10:51:52,222 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.3 pTM=0.413 ipTM=0.145 tol=5.72 2024-07-27 10:51:57,181 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.7 pTM=0.407 ipTM=0.15 tol=8.29 2024-07-27 10:52:02,157 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.9 pTM=0.419 ipTM=0.179 tol=15.2 2024-07-27 10:52:07,120 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56 pTM=0.401 ipTM=0.124 tol=13.9 2024-07-27 10:52:12,092 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.8 pTM=0.403 ipTM=0.133 tol=9.95 2024-07-27 10:52:17,049 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.7 pTM=0.399 ipTM=0.133 tol=2.89 2024-07-27 10:52:22,017 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.6 pTM=0.398 ipTM=0.12 tol=5.65 2024-07-27 10:52:26,979 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.8 pTM=0.403 ipTM=0.137 tol=7.58 2024-07-27 10:52:31,947 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.5 pTM=0.403 ipTM=0.123 tol=8.24 2024-07-27 10:52:36,901 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.8 pTM=0.411 ipTM=0.157 tol=8.46 2024-07-27 10:52:41,858 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.9 pTM=0.407 ipTM=0.13 tol=5 2024-07-27 10:52:46,818 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.9 pTM=0.41 ipTM=0.168 tol=5.45 2024-07-27 10:52:51,790 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.8 pTM=0.404 ipTM=0.123 tol=6.25 2024-07-27 10:52:56,745 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.6 pTM=0.409 ipTM=0.174 tol=6.59 2024-07-27 10:53:01,708 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.8 pTM=0.402 ipTM=0.12 tol=4.75 2024-07-27 10:53:06,663 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.9 pTM=0.413 ipTM=0.199 tol=5.16 2024-07-27 10:53:11,626 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.1 pTM=0.406 ipTM=0.153 tol=4.85 2024-07-27 10:53:11,627 alphafold2_multimer_v3_model_3_seed_000 took 154.0s (30 recycles) 2024-07-27 10:53:16,730 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.418 ipTM=0.188 2024-07-27 10:53:21,655 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.6 pTM=0.452 ipTM=0.369 tol=13.5 2024-07-27 10:53:26,588 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.3 pTM=0.446 ipTM=0.333 tol=13.8 2024-07-27 10:53:31,522 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.1 pTM=0.442 ipTM=0.243 tol=5.64 2024-07-27 10:53:36,462 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.5 pTM=0.421 ipTM=0.189 tol=6.71 2024-07-27 10:53:41,404 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.1 pTM=0.414 ipTM=0.146 tol=6.37 2024-07-27 10:53:46,344 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.3 pTM=0.424 ipTM=0.182 tol=3.93 2024-07-27 10:53:51,288 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.421 ipTM=0.163 tol=3.02 2024-07-27 10:53:56,229 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.1 pTM=0.422 ipTM=0.193 tol=5.11 2024-07-27 10:54:01,168 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.4 pTM=0.416 ipTM=0.152 tol=4.25 2024-07-27 10:54:06,107 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.8 pTM=0.469 ipTM=0.414 tol=8.84 2024-07-27 10:54:11,050 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.6 pTM=0.419 ipTM=0.17 tol=10.2 2024-07-27 10:54:15,995 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.8 pTM=0.431 ipTM=0.196 tol=5.45 2024-07-27 10:54:20,933 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.3 pTM=0.42 ipTM=0.229 tol=10.5 2024-07-27 10:54:25,881 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.3 pTM=0.412 ipTM=0.144 tol=9.4 2024-07-27 10:54:30,820 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.5 pTM=0.425 ipTM=0.168 tol=6.99 2024-07-27 10:54:35,767 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.8 pTM=0.414 ipTM=0.172 tol=8.95 2024-07-27 10:54:40,709 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.3 pTM=0.411 ipTM=0.147 tol=5.44 2024-07-27 10:54:45,653 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.8 pTM=0.418 ipTM=0.157 tol=9.6 2024-07-27 10:54:50,588 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.5 pTM=0.421 ipTM=0.213 tol=9.28 2024-07-27 10:54:55,525 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.8 pTM=0.41 ipTM=0.144 tol=10.7 2024-07-27 10:55:00,464 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.3 pTM=0.419 ipTM=0.176 tol=5.13 2024-07-27 10:55:05,401 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.8 pTM=0.427 ipTM=0.171 tol=4.42 2024-07-27 10:55:10,324 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.9 pTM=0.43 ipTM=0.277 tol=7.48 2024-07-27 10:55:15,261 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.6 pTM=0.424 ipTM=0.211 tol=7.55 2024-07-27 10:55:20,205 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.2 pTM=0.42 ipTM=0.162 tol=5.1 2024-07-27 10:55:25,142 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.6 pTM=0.42 ipTM=0.202 tol=6.71 2024-07-27 10:55:30,079 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.2 pTM=0.416 ipTM=0.149 tol=4.33 2024-07-27 10:55:35,009 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.2 pTM=0.435 ipTM=0.25 tol=5.5 2024-07-27 10:55:39,944 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.6 pTM=0.46 ipTM=0.293 tol=6.05 2024-07-27 10:55:44,882 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.2 pTM=0.428 ipTM=0.209 tol=5.16 2024-07-27 10:55:44,882 alphafold2_multimer_v3_model_4_seed_000 took 153.1s (30 recycles) 2024-07-27 10:55:50,017 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.4 pTM=0.396 ipTM=0.111 2024-07-27 10:55:54,970 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56 pTM=0.537 ipTM=0.607 tol=17.3 2024-07-27 10:55:59,936 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.9 pTM=0.4 ipTM=0.123 tol=16.1 2024-07-27 10:56:04,897 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.8 pTM=0.397 ipTM=0.12 tol=6.05 2024-07-27 10:56:09,863 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.4 pTM=0.398 ipTM=0.118 tol=9.55 2024-07-27 10:56:14,819 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.3 pTM=0.393 ipTM=0.111 tol=7.1 2024-07-27 10:56:19,787 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.9 pTM=0.43 ipTM=0.305 tol=17 2024-07-27 10:56:24,751 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.8 pTM=0.398 ipTM=0.128 tol=11.8 2024-07-27 10:56:29,716 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.6 pTM=0.397 ipTM=0.138 tol=9.03 2024-07-27 10:56:34,668 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.3 pTM=0.539 ipTM=0.614 tol=14.6 2024-07-27 10:56:39,642 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.1 pTM=0.395 ipTM=0.128 tol=13.1 2024-07-27 10:56:44,600 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.1 pTM=0.397 ipTM=0.123 tol=13.2 2024-07-27 10:56:49,568 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.1 pTM=0.395 ipTM=0.108 tol=7.17 2024-07-27 10:56:54,518 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.7 pTM=0.524 ipTM=0.574 tol=14.4 2024-07-27 10:56:59,498 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58 pTM=0.393 ipTM=0.122 tol=18.5 2024-07-27 10:57:04,441 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.3 pTM=0.394 ipTM=0.112 tol=12.2 2024-07-27 10:57:09,400 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.2 pTM=0.394 ipTM=0.107 tol=11.7 2024-07-27 10:57:14,352 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.8 pTM=0.395 ipTM=0.112 tol=5.78 2024-07-27 10:57:19,311 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58 pTM=0.394 ipTM=0.113 tol=6.79 2024-07-27 10:57:24,265 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.6 pTM=0.393 ipTM=0.108 tol=2.86 2024-07-27 10:57:29,218 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.4 pTM=0.395 ipTM=0.121 tol=4.03 2024-07-27 10:57:34,174 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.4 pTM=0.391 ipTM=0.101 tol=5.68 2024-07-27 10:57:39,138 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.7 pTM=0.395 ipTM=0.115 tol=7.07 2024-07-27 10:57:44,097 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.2 pTM=0.394 ipTM=0.106 tol=8.18 2024-07-27 10:57:49,062 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.8 pTM=0.391 ipTM=0.107 tol=8.05 2024-07-27 10:57:54,022 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.6 pTM=0.393 ipTM=0.116 tol=3.26 2024-07-27 10:57:58,981 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.7 pTM=0.411 ipTM=0.16 tol=7.61 2024-07-27 10:58:03,943 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.4 pTM=0.394 ipTM=0.116 tol=6.72 2024-07-27 10:58:08,902 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.9 pTM=0.394 ipTM=0.112 tol=7.17 2024-07-27 10:58:13,862 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.8 pTM=0.397 ipTM=0.126 tol=6 2024-07-27 10:58:18,825 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.5 pTM=0.393 ipTM=0.105 tol=5.25 2024-07-27 10:58:18,825 alphafold2_multimer_v3_model_5_seed_000 took 153.8s (30 recycles) 2024-07-27 10:58:18,985 reranking models by 'multimer' metric 2024-07-27 10:58:19,872 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 10:58:39,537 Relaxation took 20.6s 2024-07-27 10:58:39,537 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.5 pTM=0.532 ipTM=0.639 2024-07-27 10:58:56,245 Relaxation took 16.7s 2024-07-27 10:58:56,245 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.2 pTM=0.428 ipTM=0.209 2024-07-27 10:59:16,533 Relaxation took 20.3s 2024-07-27 10:59:16,533 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.1 pTM=0.406 ipTM=0.153 2024-07-27 10:59:44,788 Relaxation took 28.3s 2024-07-27 10:59:44,788 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.6 pTM=0.405 ipTM=0.14 2024-07-27 11:00:00,715 Relaxation took 15.9s 2024-07-27 11:00:00,715 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.5 pTM=0.393 ipTM=0.105 2024-07-27 11:00:01,697 Done