2024-07-27 12:00:57,010 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 12:00:57,373 Running on GPU
2024-07-27 12:01:00,922 Found 6 citations for tools or databases
2024-07-27 12:01:00,922 Query 1/1: SLC29A3_SKP2 (length 899)
2024-07-27 12:01:01,385 Sleeping for 8s. Reason: PENDING
2024-07-27 12:01:09,813 Sleeping for 7s. Reason: RUNNING
2024-07-27 12:01:17,245 Sleeping for 8s. Reason: RUNNING
2024-07-27 12:01:25,673 Sleeping for 9s. Reason: RUNNING
2024-07-27 12:01:35,097 Sleeping for 6s. Reason: RUNNING
2024-07-27 12:01:41,509 Sleeping for 7s. Reason: RUNNING
2024-07-27 12:01:48,926 Sleeping for 9s. Reason: RUNNING
2024-07-27 12:01:58,357 Sleeping for 8s. Reason: RUNNING
2024-07-27 12:02:08,439 Sleeping for 8s. Reason: PENDING
2024-07-27 12:02:16,867 Sleeping for 6s. Reason: RUNNING
2024-07-27 12:02:23,285 Sleeping for 10s. Reason: RUNNING
2024-07-27 12:02:33,703 Sleeping for 7s. Reason: RUNNING
2024-07-27 12:02:41,159 Sleeping for 8s. Reason: RUNNING
2024-07-27 12:02:49,614 Sleeping for 8s. Reason: RUNNING
2024-07-27 12:03:00,703 Setting max_seq=508, max_extra_seq=2048
2024-07-27 12:06:19,213 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.4 pTM=0.474 ipTM=0.134
2024-07-27 12:06:36,204 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.9 pTM=0.487 ipTM=0.154 tol=7.44
2024-07-27 12:06:53,246 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.6 pTM=0.489 ipTM=0.16 tol=7.98
2024-07-27 12:07:10,328 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.7 pTM=0.49 ipTM=0.158 tol=5.58
2024-07-27 12:07:27,456 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.1 pTM=0.493 ipTM=0.143 tol=2.62
2024-07-27 12:07:44,568 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.9 pTM=0.492 ipTM=0.15 tol=1.18
2024-07-27 12:08:01,716 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.9 pTM=0.493 ipTM=0.151 tol=2.65
2024-07-27 12:08:18,917 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.1 pTM=0.492 ipTM=0.145 tol=1.68
2024-07-27 12:08:36,117 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.9 pTM=0.492 ipTM=0.139 tol=1.77
2024-07-27 12:08:53,322 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.8 pTM=0.492 ipTM=0.14 tol=2.22
2024-07-27 12:09:10,535 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.9 pTM=0.494 ipTM=0.138 tol=2.71
2024-07-27 12:09:27,749 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.9 pTM=0.492 ipTM=0.137 tol=2.49
2024-07-27 12:09:44,983 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.8 pTM=0.49 ipTM=0.138 tol=1.88
2024-07-27 12:10:02,209 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.6 pTM=0.49 ipTM=0.138 tol=1.44
2024-07-27 12:10:19,454 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.8 pTM=0.491 ipTM=0.14 tol=2.03
2024-07-27 12:10:36,692 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.4 pTM=0.489 ipTM=0.139 tol=2.39
2024-07-27 12:10:53,911 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.4 pTM=0.489 ipTM=0.139 tol=1.7
2024-07-27 12:11:11,171 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.6 pTM=0.488 ipTM=0.135 tol=2.26
2024-07-27 12:11:28,414 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.5 pTM=0.489 ipTM=0.137 tol=2.11
2024-07-27 12:11:45,647 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.6 pTM=0.489 ipTM=0.136 tol=1.82
2024-07-27 12:12:02,873 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.6 pTM=0.492 ipTM=0.141 tol=2.04
2024-07-27 12:12:20,130 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.7 pTM=0.491 ipTM=0.136 tol=2.76
2024-07-27 12:12:37,373 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.2 pTM=0.49 ipTM=0.14 tol=3.3
2024-07-27 12:12:54,627 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.7 pTM=0.491 ipTM=0.142 tol=2.88
2024-07-27 12:13:11,865 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.5 pTM=0.49 ipTM=0.141 tol=3.55
2024-07-27 12:13:29,124 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.6 pTM=0.49 ipTM=0.137 tol=2.68
2024-07-27 12:13:46,378 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.6 pTM=0.491 ipTM=0.141 tol=2.44
2024-07-27 12:14:03,633 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.6 pTM=0.491 ipTM=0.141 tol=6.35
2024-07-27 12:14:20,885 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.8 pTM=0.49 ipTM=0.139 tol=2.63
2024-07-27 12:14:38,146 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.8 pTM=0.49 ipTM=0.141 tol=2.27
2024-07-27 12:14:55,406 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.6 pTM=0.491 ipTM=0.142 tol=2.26
2024-07-27 12:14:55,407 alphafold2_multimer_v3_model_1_seed_000 took 710.3s (30 recycles)
2024-07-27 12:15:13,095 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.4 pTM=0.484 ipTM=0.169
2024-07-27 12:15:30,375 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.4 pTM=0.494 ipTM=0.145 tol=5.65
2024-07-27 12:15:47,659 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.6 pTM=0.497 ipTM=0.3 tol=5.52
2024-07-27 12:16:04,933 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.9 pTM=0.496 ipTM=0.159 tol=4.37
2024-07-27 12:16:22,202 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.1 pTM=0.496 ipTM=0.15 tol=2.19
2024-07-27 12:16:39,479 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.2 pTM=0.494 ipTM=0.15 tol=1.53
2024-07-27 12:16:56,741 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.1 pTM=0.494 ipTM=0.155 tol=1.92
2024-07-27 12:17:13,995 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.3 pTM=0.495 ipTM=0.156 tol=1.21
2024-07-27 12:17:31,264 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.1 pTM=0.492 ipTM=0.146 tol=0.985
2024-07-27 12:17:48,543 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.2 pTM=0.493 ipTM=0.149 tol=1.13
2024-07-27 12:18:05,816 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.1 pTM=0.49 ipTM=0.144 tol=1.38
2024-07-27 12:18:23,092 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.1 pTM=0.492 ipTM=0.147 tol=1.1
2024-07-27 12:18:40,376 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75 pTM=0.49 ipTM=0.144 tol=0.985
2024-07-27 12:18:57,655 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.9 pTM=0.49 ipTM=0.146 tol=0.669
2024-07-27 12:19:14,928 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.9 pTM=0.489 ipTM=0.143 tol=0.635
2024-07-27 12:19:32,202 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.7 pTM=0.489 ipTM=0.147 tol=1.54
2024-07-27 12:19:49,475 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.7 pTM=0.488 ipTM=0.145 tol=1.06
2024-07-27 12:20:06,752 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75 pTM=0.49 ipTM=0.149 tol=1.01
2024-07-27 12:20:24,031 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.6 pTM=0.488 ipTM=0.146 tol=0.897
2024-07-27 12:20:41,287 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.6 pTM=0.488 ipTM=0.146 tol=1.38
2024-07-27 12:20:58,553 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.8 pTM=0.49 ipTM=0.146 tol=1.11
2024-07-27 12:21:15,822 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.1 pTM=0.49 ipTM=0.144 tol=1.12
2024-07-27 12:21:33,088 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.4 pTM=0.486 ipTM=0.142 tol=1.1
2024-07-27 12:21:50,377 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.9 pTM=0.49 ipTM=0.151 tol=1.47
2024-07-27 12:22:07,668 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.8 pTM=0.489 ipTM=0.147 tol=1.82
2024-07-27 12:22:24,946 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.7 pTM=0.489 ipTM=0.145 tol=1.88
2024-07-27 12:22:42,220 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.8 pTM=0.488 ipTM=0.144 tol=1.87
2024-07-27 12:22:59,483 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.6 pTM=0.488 ipTM=0.149 tol=2.05
2024-07-27 12:23:16,742 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.8 pTM=0.488 ipTM=0.145 tol=1.2
2024-07-27 12:23:33,999 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.8 pTM=0.49 ipTM=0.151 tol=1.34
2024-07-27 12:23:51,266 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.6 pTM=0.489 ipTM=0.151 tol=1.05
2024-07-27 12:23:51,266 alphafold2_multimer_v3_model_2_seed_000 took 535.4s (30 recycles)
2024-07-27 12:24:09,001 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.6 pTM=0.477 ipTM=0.189
2024-07-27 12:24:26,236 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.4 pTM=0.505 ipTM=0.168 tol=7.7
2024-07-27 12:24:43,469 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.1 pTM=0.502 ipTM=0.186 tol=3.83
2024-07-27 12:25:00,708 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.3 pTM=0.506 ipTM=0.177 tol=2.13
2024-07-27 12:25:17,963 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.6 pTM=0.503 ipTM=0.169 tol=1.33
2024-07-27 12:25:35,206 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.8 pTM=0.51 ipTM=0.184 tol=1.48
2024-07-27 12:25:52,438 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.3 pTM=0.503 ipTM=0.169 tol=1.6
2024-07-27 12:26:09,686 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.7 pTM=0.508 ipTM=0.178 tol=2.17
2024-07-27 12:26:26,924 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.5 pTM=0.501 ipTM=0.167 tol=1.34
2024-07-27 12:26:44,168 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.7 pTM=0.508 ipTM=0.177 tol=1.49
2024-07-27 12:27:01,416 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.6 pTM=0.506 ipTM=0.171 tol=1.69
2024-07-27 12:27:18,658 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.8 pTM=0.509 ipTM=0.181 tol=1.5
2024-07-27 12:27:35,893 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.6 pTM=0.507 ipTM=0.176 tol=4.46
2024-07-27 12:27:53,137 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.5 pTM=0.507 ipTM=0.178 tol=4.8
2024-07-27 12:28:10,377 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.7 pTM=0.507 ipTM=0.177 tol=0.9
2024-07-27 12:28:27,616 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.4 pTM=0.506 ipTM=0.176 tol=2.26
2024-07-27 12:28:44,849 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.5 pTM=0.507 ipTM=0.18 tol=1.17
2024-07-27 12:29:02,061 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.4 pTM=0.507 ipTM=0.178 tol=1.81
2024-07-27 12:29:19,280 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.4 pTM=0.506 ipTM=0.176 tol=1.78
2024-07-27 12:29:36,492 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.2 pTM=0.506 ipTM=0.178 tol=1.92
2024-07-27 12:29:53,720 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.2 pTM=0.507 ipTM=0.178 tol=5.08
2024-07-27 12:30:10,954 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.4 pTM=0.506 ipTM=0.173 tol=3.44
2024-07-27 12:30:28,162 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74 pTM=0.506 ipTM=0.177 tol=2.83
2024-07-27 12:30:45,381 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.1 pTM=0.501 ipTM=0.173 tol=3.68
2024-07-27 12:31:02,589 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.1 pTM=0.514 ipTM=0.197 tol=3.24
2024-07-27 12:31:19,824 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.9 pTM=0.495 ipTM=0.16 tol=3.5
2024-07-27 12:31:37,038 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.2 pTM=0.51 ipTM=0.189 tol=2.96
2024-07-27 12:31:54,253 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.9 pTM=0.497 ipTM=0.167 tol=2.75
2024-07-27 12:32:11,471 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.1 pTM=0.512 ipTM=0.189 tol=4.73
2024-07-27 12:32:28,702 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.9 pTM=0.501 ipTM=0.17 tol=4.73
2024-07-27 12:32:45,912 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.2 pTM=0.519 ipTM=0.204 tol=5.06
2024-07-27 12:32:45,912 alphafold2_multimer_v3_model_3_seed_000 took 534.1s (30 recycles)
2024-07-27 12:33:03,655 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.1 pTM=0.572 ipTM=0.394
2024-07-27 12:33:20,942 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.6 pTM=0.516 ipTM=0.185 tol=8.19
2024-07-27 12:33:38,254 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75.2 pTM=0.508 ipTM=0.182 tol=5.14
2024-07-27 12:33:55,551 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.5 pTM=0.502 ipTM=0.167 tol=4.58
2024-07-27 12:34:12,879 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.6 pTM=0.503 ipTM=0.171 tol=3.97
2024-07-27 12:34:30,212 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.8 pTM=0.503 ipTM=0.17 tol=3.46
2024-07-27 12:34:47,513 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.5 pTM=0.502 ipTM=0.167 tol=5.2
2024-07-27 12:35:04,801 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.7 pTM=0.502 ipTM=0.163 tol=4.34
2024-07-27 12:35:22,107 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.7 pTM=0.501 ipTM=0.16 tol=3.34
2024-07-27 12:35:39,411 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.6 pTM=0.502 ipTM=0.161 tol=1.88
2024-07-27 12:35:56,736 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=75.6 pTM=0.501 ipTM=0.162 tol=6.97
2024-07-27 12:36:14,051 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.8 pTM=0.504 ipTM=0.164 tol=5.11
2024-07-27 12:36:31,366 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.8 pTM=0.509 ipTM=0.171 tol=3.95
2024-07-27 12:36:48,688 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.6 pTM=0.505 ipTM=0.166 tol=2.95
2024-07-27 12:37:06,011 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.6 pTM=0.503 ipTM=0.164 tol=2.71
2024-07-27 12:37:23,337 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.6 pTM=0.503 ipTM=0.164 tol=1.82
2024-07-27 12:37:40,675 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=75.7 pTM=0.507 ipTM=0.17 tol=1.42
2024-07-27 12:37:58,009 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.7 pTM=0.504 ipTM=0.163 tol=1.93
2024-07-27 12:38:15,324 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.6 pTM=0.505 ipTM=0.167 tol=3.06
2024-07-27 12:38:32,639 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.4 pTM=0.504 ipTM=0.166 tol=2.63
2024-07-27 12:38:49,955 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75.7 pTM=0.504 ipTM=0.166 tol=2.94
2024-07-27 12:39:07,281 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.8 pTM=0.506 ipTM=0.167 tol=3.13
2024-07-27 12:39:24,586 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.4 pTM=0.505 ipTM=0.17 tol=3.27
2024-07-27 12:39:41,907 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.6 pTM=0.511 ipTM=0.176 tol=3.73
2024-07-27 12:39:59,216 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.6 pTM=0.507 ipTM=0.171 tol=1.44
2024-07-27 12:40:16,540 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.6 pTM=0.502 ipTM=0.16 tol=1.65
2024-07-27 12:40:33,855 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.7 pTM=0.502 ipTM=0.161 tol=1.28
2024-07-27 12:40:51,167 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75.7 pTM=0.504 ipTM=0.167 tol=3.14
2024-07-27 12:41:08,479 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.9 pTM=0.503 ipTM=0.162 tol=2.65
2024-07-27 12:41:25,790 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=75.6 pTM=0.506 ipTM=0.17 tol=1.7
2024-07-27 12:41:43,115 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.7 pTM=0.505 ipTM=0.167 tol=1.08
2024-07-27 12:41:43,115 alphafold2_multimer_v3_model_4_seed_000 took 536.7s (30 recycles)
2024-07-27 12:42:00,881 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.8 pTM=0.485 ipTM=0.187
2024-07-27 12:42:18,182 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.9 pTM=0.506 ipTM=0.174 tol=4.73
2024-07-27 12:42:35,504 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.1 pTM=0.498 ipTM=0.157 tol=3.89
2024-07-27 12:42:52,821 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75 pTM=0.495 ipTM=0.156 tol=1.41
2024-07-27 12:43:10,154 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.6 pTM=0.499 ipTM=0.157 tol=3.2
2024-07-27 12:43:27,474 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.4 pTM=0.5 ipTM=0.16 tol=1.65
2024-07-27 12:43:44,792 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.2 pTM=0.498 ipTM=0.16 tol=1.5
2024-07-27 12:44:02,116 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.4 pTM=0.496 ipTM=0.155 tol=1.02
2024-07-27 12:44:19,450 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.4 pTM=0.497 ipTM=0.155 tol=1.93
2024-07-27 12:44:36,778 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.2 pTM=0.497 ipTM=0.16 tol=1.97
2024-07-27 12:44:54,122 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.4 pTM=0.499 ipTM=0.157 tol=1.71
2024-07-27 12:45:11,452 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.5 pTM=0.497 ipTM=0.155 tol=1.19
2024-07-27 12:45:28,790 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.4 pTM=0.498 ipTM=0.157 tol=1.33
2024-07-27 12:45:46,132 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.3 pTM=0.498 ipTM=0.16 tol=1.21
2024-07-27 12:46:03,465 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=75.3 pTM=0.496 ipTM=0.158 tol=0.804
2024-07-27 12:46:20,792 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.2 pTM=0.496 ipTM=0.159 tol=1.53
2024-07-27 12:46:38,117 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.2 pTM=0.497 ipTM=0.16 tol=1.82
2024-07-27 12:46:55,434 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.2 pTM=0.497 ipTM=0.16 tol=0.874
2024-07-27 12:47:12,760 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.1 pTM=0.496 ipTM=0.158 tol=1.41
2024-07-27 12:47:30,070 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.1 pTM=0.496 ipTM=0.159 tol=1.78
2024-07-27 12:47:47,385 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.1 pTM=0.497 ipTM=0.16 tol=1.37
2024-07-27 12:48:04,675 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.2 pTM=0.497 ipTM=0.156 tol=1.23
2024-07-27 12:48:21,970 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.1 pTM=0.495 ipTM=0.157 tol=1.88
2024-07-27 12:48:39,282 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.2 pTM=0.498 ipTM=0.16 tol=1.79
2024-07-27 12:48:56,595 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.1 pTM=0.497 ipTM=0.161 tol=2.04
2024-07-27 12:49:13,928 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.3 pTM=0.496 ipTM=0.154 tol=1.48
2024-07-27 12:49:31,258 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.3 pTM=0.497 ipTM=0.158 tol=1.62
2024-07-27 12:49:48,580 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.2 pTM=0.495 ipTM=0.158 tol=2.08
2024-07-27 12:50:05,894 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.1 pTM=0.496 ipTM=0.161 tol=0.78
2024-07-27 12:50:23,223 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.2 pTM=0.496 ipTM=0.161 tol=1.02
2024-07-27 12:50:40,551 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75.1 pTM=0.496 ipTM=0.161 tol=1.67
2024-07-27 12:50:40,552 alphafold2_multimer_v3_model_5_seed_000 took 536.9s (30 recycles)
2024-07-27 12:50:41,051 reranking models by 'multimer' metric
2024-07-27 12:50:44,261 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 12:51:58,101 Relaxation took 77.1s
2024-07-27 12:51:58,101 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.2 pTM=0.519 ipTM=0.204
2024-07-27 12:53:15,680 Relaxation took 77.6s
2024-07-27 12:53:15,680 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.7 pTM=0.505 ipTM=0.167
2024-07-27 12:54:25,238 Relaxation took 69.6s
2024-07-27 12:54:25,239 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.1 pTM=0.496 ipTM=0.161
2024-07-27 12:55:50,711 Relaxation took 85.5s
2024-07-27 12:55:50,712 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.6 pTM=0.489 ipTM=0.151
2024-07-27 12:57:01,234 Relaxation took 70.5s
2024-07-27 12:57:01,234 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.6 pTM=0.491 ipTM=0.142
2024-07-27 12:57:02,848 Done