2024-07-27 12:19:42,287 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 12:19:42,610 Running on GPU 2024-07-27 12:19:46,477 Found 6 citations for tools or databases 2024-07-27 12:19:46,477 Query 1/1: SNPH_FBXL7 (length 985) 2024-07-27 12:19:46,926 Sleeping for 6s. Reason: PENDING 2024-07-27 12:19:53,343 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:19:58,750 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:20:09,171 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:20:14,608 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:20:25,033 Sleeping for 8s. Reason: RUNNING 2024-07-27 12:20:33,471 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:20:43,893 Sleeping for 8s. Reason: RUNNING 2024-07-27 12:20:52,309 Sleeping for 8s. Reason: RUNNING 2024-07-27 12:21:00,736 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:21:12,667 Sleeping for 8s. Reason: PENDING 2024-07-27 12:21:21,096 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:21:31,522 Sleeping for 7s. Reason: RUNNING 2024-07-27 12:21:38,941 Sleeping for 8s. Reason: RUNNING 2024-07-27 12:21:47,359 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:21:52,794 Sleeping for 8s. Reason: RUNNING 2024-07-27 12:22:01,203 Sleeping for 6s. Reason: RUNNING 2024-07-27 12:22:07,638 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:22:20,271 Setting max_seq=508, max_extra_seq=2048 2024-07-27 12:25:57,232 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.7 pTM=0.469 ipTM=0.353 2024-07-27 12:26:19,284 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.4 pTM=0.482 ipTM=0.584 tol=17.1 2024-07-27 12:26:41,395 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.9 pTM=0.496 ipTM=0.609 tol=7.05 2024-07-27 12:27:03,555 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.8 pTM=0.489 ipTM=0.58 tol=4.52 2024-07-27 12:27:25,776 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.9 pTM=0.49 ipTM=0.571 tol=5.67 2024-07-27 12:27:48,013 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.1 pTM=0.491 ipTM=0.576 tol=4.23 2024-07-27 12:28:10,283 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.1 pTM=0.497 ipTM=0.588 tol=4.09 2024-07-27 12:28:32,577 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.5 pTM=0.498 ipTM=0.6 tol=3.86 2024-07-27 12:28:54,884 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.2 pTM=0.495 ipTM=0.593 tol=2.29 2024-07-27 12:29:17,186 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.5 pTM=0.498 ipTM=0.605 tol=3.48 2024-07-27 12:29:39,486 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.6 pTM=0.497 ipTM=0.614 tol=2.68 2024-07-27 12:30:01,796 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.5 pTM=0.497 ipTM=0.621 tol=2.69 2024-07-27 12:30:24,095 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.7 pTM=0.499 ipTM=0.613 tol=2.37 2024-07-27 12:30:46,418 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.3 pTM=0.496 ipTM=0.607 tol=4.32 2024-07-27 12:31:08,750 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.3 pTM=0.494 ipTM=0.592 tol=2.29 2024-07-27 12:31:31,082 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.6 pTM=0.5 ipTM=0.607 tol=2.69 2024-07-27 12:31:53,421 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.8 pTM=0.5 ipTM=0.613 tol=2.56 2024-07-27 12:32:15,781 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.5 pTM=0.496 ipTM=0.608 tol=1.84 2024-07-27 12:32:38,149 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.5 pTM=0.497 ipTM=0.615 tol=2.09 2024-07-27 12:33:00,509 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.5 pTM=0.496 ipTM=0.605 tol=1.86 2024-07-27 12:33:22,872 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.6 pTM=0.499 ipTM=0.615 tol=3.16 2024-07-27 12:33:45,212 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.4 pTM=0.494 ipTM=0.597 tol=4.15 2024-07-27 12:34:07,576 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.9 pTM=0.5 ipTM=0.61 tol=2.07 2024-07-27 12:34:29,956 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.6 pTM=0.497 ipTM=0.608 tol=2.91 2024-07-27 12:34:52,309 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.8 pTM=0.497 ipTM=0.61 tol=3.4 2024-07-27 12:35:14,650 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.8 pTM=0.498 ipTM=0.6 tol=3.67 2024-07-27 12:35:37,013 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.8 pTM=0.5 ipTM=0.611 tol=2.82 2024-07-27 12:35:59,385 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.5 pTM=0.495 ipTM=0.599 tol=2.05 2024-07-27 12:36:21,763 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.8 pTM=0.498 ipTM=0.593 tol=2.42 2024-07-27 12:36:44,155 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.4 pTM=0.493 ipTM=0.589 tol=2.69 2024-07-27 12:37:06,544 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.7 pTM=0.498 ipTM=0.597 tol=2 2024-07-27 12:37:06,544 alphafold2_multimer_v3_model_1_seed_000 took 881.2s (30 recycles) 2024-07-27 12:37:29,594 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.2 pTM=0.465 ipTM=0.268 2024-07-27 12:37:52,049 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55 pTM=0.496 ipTM=0.635 tol=15.6 2024-07-27 12:38:14,488 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.4 pTM=0.499 ipTM=0.661 tol=7.42 2024-07-27 12:38:36,915 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.498 ipTM=0.649 tol=7.42 2024-07-27 12:38:59,363 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.4 pTM=0.496 ipTM=0.638 tol=4.4 2024-07-27 12:39:21,830 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.4 pTM=0.496 ipTM=0.646 tol=3.73 2024-07-27 12:39:44,292 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.5 pTM=0.495 ipTM=0.638 tol=4.21 2024-07-27 12:40:06,723 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.5 pTM=0.494 ipTM=0.638 tol=3.17 2024-07-27 12:40:29,168 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.5 pTM=0.496 ipTM=0.642 tol=3.37 2024-07-27 12:40:51,599 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.7 pTM=0.499 ipTM=0.656 tol=3.3 2024-07-27 12:41:14,046 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.8 pTM=0.498 ipTM=0.651 tol=5.97 2024-07-27 12:41:36,494 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56 pTM=0.5 ipTM=0.664 tol=5.8 2024-07-27 12:41:58,954 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.8 pTM=0.498 ipTM=0.654 tol=3.82 2024-07-27 12:42:21,404 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.8 pTM=0.499 ipTM=0.658 tol=4.56 2024-07-27 12:42:43,837 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.7 pTM=0.497 ipTM=0.645 tol=3.2 2024-07-27 12:43:06,255 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.8 pTM=0.498 ipTM=0.655 tol=2.07 2024-07-27 12:43:28,686 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.8 pTM=0.498 ipTM=0.65 tol=1.67 2024-07-27 12:43:51,110 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.8 pTM=0.499 ipTM=0.657 tol=1.47 2024-07-27 12:44:13,537 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.7 pTM=0.497 ipTM=0.648 tol=2.2 2024-07-27 12:44:35,969 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.9 pTM=0.499 ipTM=0.652 tol=2.08 2024-07-27 12:44:58,393 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.7 pTM=0.497 ipTM=0.647 tol=1.98 2024-07-27 12:45:20,806 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.7 pTM=0.497 ipTM=0.646 tol=1.92 2024-07-27 12:45:43,244 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.8 pTM=0.497 ipTM=0.636 tol=1.91 2024-07-27 12:46:05,682 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.8 pTM=0.498 ipTM=0.647 tol=1.79 2024-07-27 12:46:28,125 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.8 pTM=0.496 ipTM=0.644 tol=1.53 2024-07-27 12:46:50,555 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.7 pTM=0.498 ipTM=0.644 tol=1.57 2024-07-27 12:47:12,993 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.7 pTM=0.498 ipTM=0.647 tol=2.18 2024-07-27 12:47:35,427 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.8 pTM=0.498 ipTM=0.649 tol=1.69 2024-07-27 12:47:57,846 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.7 pTM=0.497 ipTM=0.643 tol=3.66 2024-07-27 12:48:20,262 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.9 pTM=0.498 ipTM=0.65 tol=2.63 2024-07-27 12:48:42,678 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.8 pTM=0.497 ipTM=0.636 tol=1.78 2024-07-27 12:48:42,679 alphafold2_multimer_v3_model_2_seed_000 took 695.5s (30 recycles) 2024-07-27 12:49:05,749 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.5 pTM=0.457 ipTM=0.279 2024-07-27 12:49:28,182 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.2 pTM=0.485 ipTM=0.544 tol=17.1 2024-07-27 12:49:50,614 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.1 pTM=0.481 ipTM=0.516 tol=8.91 2024-07-27 12:50:13,046 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.5 pTM=0.486 ipTM=0.537 tol=5.26 2024-07-27 12:50:35,493 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.8 pTM=0.49 ipTM=0.54 tol=4.44 2024-07-27 12:50:57,937 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.9 pTM=0.491 ipTM=0.552 tol=8.44 2024-07-27 12:51:20,385 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.8 pTM=0.49 ipTM=0.537 tol=3.89 2024-07-27 12:51:42,843 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55 pTM=0.493 ipTM=0.551 tol=3.19 2024-07-27 12:52:05,286 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.1 pTM=0.495 ipTM=0.562 tol=4.25 2024-07-27 12:52:27,696 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.1 pTM=0.494 ipTM=0.558 tol=2.95 2024-07-27 12:52:50,115 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55.1 pTM=0.494 ipTM=0.561 tol=4.62 2024-07-27 12:53:12,513 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55 pTM=0.495 ipTM=0.552 tol=4.04 2024-07-27 12:53:34,903 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55 pTM=0.492 ipTM=0.554 tol=2.67 2024-07-27 12:53:57,310 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55 pTM=0.493 ipTM=0.554 tol=2.95 2024-07-27 12:54:19,722 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.7 pTM=0.49 ipTM=0.538 tol=2.59 2024-07-27 12:54:42,161 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55 pTM=0.493 ipTM=0.555 tol=4.05 2024-07-27 12:55:04,576 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55 pTM=0.493 ipTM=0.556 tol=4.27 2024-07-27 12:55:27,000 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.7 pTM=0.49 ipTM=0.542 tol=5 2024-07-27 12:55:49,433 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.9 pTM=0.492 ipTM=0.541 tol=5.09 2024-07-27 12:56:11,857 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.8 pTM=0.491 ipTM=0.541 tol=4.62 2024-07-27 12:56:34,289 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55 pTM=0.493 ipTM=0.552 tol=3.88 2024-07-27 12:56:56,741 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55 pTM=0.495 ipTM=0.554 tol=3.41 2024-07-27 12:57:19,191 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55 pTM=0.493 ipTM=0.544 tol=2.68 2024-07-27 12:57:41,638 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55 pTM=0.491 ipTM=0.546 tol=2.69 2024-07-27 12:58:04,097 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.9 pTM=0.487 ipTM=0.542 tol=4.01 2024-07-27 12:58:26,540 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.7 pTM=0.486 ipTM=0.536 tol=3.46 2024-07-27 12:58:48,988 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55 pTM=0.486 ipTM=0.538 tol=4.88 2024-07-27 12:59:11,435 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.8 pTM=0.485 ipTM=0.536 tol=3.69 2024-07-27 12:59:33,874 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.8 pTM=0.485 ipTM=0.539 tol=2.33 2024-07-27 12:59:56,334 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55 pTM=0.486 ipTM=0.542 tol=2.66 2024-07-27 13:00:18,794 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.9 pTM=0.487 ipTM=0.54 tol=3.53 2024-07-27 13:00:18,795 alphafold2_multimer_v3_model_3_seed_000 took 695.5s (30 recycles) 2024-07-27 13:00:41,837 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51 pTM=0.479 ipTM=0.502 2024-07-27 13:01:04,289 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.3 pTM=0.481 ipTM=0.574 tol=22 2024-07-27 13:01:26,735 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.3 pTM=0.493 ipTM=0.613 tol=15.1 2024-07-27 13:01:49,192 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=53 pTM=0.488 ipTM=0.581 tol=7 2024-07-27 13:02:11,675 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.7 pTM=0.49 ipTM=0.606 tol=5.84 2024-07-27 13:02:34,145 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.4 pTM=0.486 ipTM=0.596 tol=4.57 2024-07-27 13:02:56,626 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.4 pTM=0.487 ipTM=0.617 tol=5.2 2024-07-27 13:03:19,072 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.6 pTM=0.487 ipTM=0.596 tol=7.02 2024-07-27 13:03:41,527 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.7 pTM=0.489 ipTM=0.612 tol=5.31 2024-07-27 13:04:03,965 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.5 pTM=0.486 ipTM=0.591 tol=5.48 2024-07-27 13:04:26,403 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.7 pTM=0.49 ipTM=0.625 tol=3.47 2024-07-27 13:04:48,818 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.6 pTM=0.49 ipTM=0.612 tol=8.59 2024-07-27 13:05:11,257 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.3 pTM=0.489 ipTM=0.623 tol=11.1 2024-07-27 13:05:33,699 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.5 pTM=0.49 ipTM=0.614 tol=8.15 2024-07-27 13:05:56,163 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.9 pTM=0.488 ipTM=0.624 tol=3.83 2024-07-27 13:06:18,634 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.4 pTM=0.489 ipTM=0.607 tol=4.51 2024-07-27 13:06:41,120 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.1 pTM=0.487 ipTM=0.614 tol=2.88 2024-07-27 13:07:03,577 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.5 pTM=0.488 ipTM=0.595 tol=2.95 2024-07-27 13:07:26,035 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.3 pTM=0.491 ipTM=0.621 tol=2.91 2024-07-27 13:07:48,471 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.2 pTM=0.487 ipTM=0.604 tol=4.88 2024-07-27 13:08:10,938 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.1 pTM=0.487 ipTM=0.624 tol=7.86 2024-07-27 13:08:33,403 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.3 pTM=0.487 ipTM=0.608 tol=6.19 2024-07-27 13:08:55,835 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.6 pTM=0.491 ipTM=0.621 tol=4.65 2024-07-27 13:09:18,260 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.4 pTM=0.486 ipTM=0.611 tol=6.55 2024-07-27 13:09:40,740 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53 pTM=0.484 ipTM=0.624 tol=8.34 2024-07-27 13:10:03,199 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.3 pTM=0.486 ipTM=0.606 tol=4.75 2024-07-27 13:10:25,661 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.7 pTM=0.49 ipTM=0.621 tol=7.41 2024-07-27 13:10:48,102 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.5 pTM=0.487 ipTM=0.591 tol=7.87 2024-07-27 13:11:10,538 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.3 pTM=0.486 ipTM=0.605 tol=3.82 2024-07-27 13:11:32,958 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.2 pTM=0.485 ipTM=0.604 tol=4.08 2024-07-27 13:11:55,390 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.9 pTM=0.484 ipTM=0.615 tol=9.13 2024-07-27 13:11:55,391 alphafold2_multimer_v3_model_4_seed_000 took 696.0s (30 recycles) 2024-07-27 13:12:18,458 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.3 pTM=0.456 ipTM=0.364 2024-07-27 13:12:40,848 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.1 pTM=0.497 ipTM=0.617 tol=16.5 2024-07-27 13:13:03,239 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.3 pTM=0.496 ipTM=0.621 tol=7.79 2024-07-27 13:13:25,655 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.8 pTM=0.502 ipTM=0.627 tol=5.25 2024-07-27 13:13:48,101 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.9 pTM=0.5 ipTM=0.634 tol=6.32 2024-07-27 13:14:10,545 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.2 pTM=0.504 ipTM=0.654 tol=7.04 2024-07-27 13:14:32,979 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.1 pTM=0.5 ipTM=0.634 tol=6.18 2024-07-27 13:14:55,420 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.4 pTM=0.505 ipTM=0.647 tol=3.73 2024-07-27 13:15:17,863 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.1 pTM=0.501 ipTM=0.636 tol=4.07 2024-07-27 13:15:40,311 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.3 pTM=0.503 ipTM=0.642 tol=3.29 2024-07-27 13:16:02,742 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.2 pTM=0.501 ipTM=0.645 tol=6.21 2024-07-27 13:16:25,174 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.3 pTM=0.503 ipTM=0.641 tol=7.29 2024-07-27 13:16:47,621 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55 pTM=0.5 ipTM=0.638 tol=6.36 2024-07-27 13:17:10,070 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.1 pTM=0.502 ipTM=0.641 tol=7.62 2024-07-27 13:17:32,492 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55 pTM=0.5 ipTM=0.635 tol=4.91 2024-07-27 13:17:54,916 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.2 pTM=0.504 ipTM=0.647 tol=5.37 2024-07-27 13:18:17,340 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55 pTM=0.5 ipTM=0.636 tol=7.28 2024-07-27 13:18:39,758 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.1 pTM=0.503 ipTM=0.647 tol=5.93 2024-07-27 13:19:02,171 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.1 pTM=0.502 ipTM=0.637 tol=3.25 2024-07-27 13:19:24,593 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.2 pTM=0.503 ipTM=0.646 tol=3.35 2024-07-27 13:19:47,014 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.1 pTM=0.501 ipTM=0.641 tol=1.96 2024-07-27 13:20:09,426 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.5 pTM=0.506 ipTM=0.653 tol=1.99 2024-07-27 13:20:31,815 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.3 pTM=0.504 ipTM=0.64 tol=3.43 2024-07-27 13:20:54,214 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.3 pTM=0.504 ipTM=0.64 tol=3.29 2024-07-27 13:21:16,600 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.2 pTM=0.501 ipTM=0.647 tol=4.8 2024-07-27 13:21:38,996 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.1 pTM=0.502 ipTM=0.64 tol=4.52 2024-07-27 13:22:01,394 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.2 pTM=0.501 ipTM=0.646 tol=6.34 2024-07-27 13:22:23,789 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.2 pTM=0.502 ipTM=0.635 tol=8.91 2024-07-27 13:22:46,169 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55 pTM=0.501 ipTM=0.633 tol=5.2 2024-07-27 13:23:08,589 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.2 pTM=0.502 ipTM=0.635 tol=6.17 2024-07-27 13:23:30,989 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.1 pTM=0.499 ipTM=0.633 tol=5.8 2024-07-27 13:23:30,990 alphafold2_multimer_v3_model_5_seed_000 took 695.0s (30 recycles) 2024-07-27 13:23:31,586 reranking models by 'multimer' metric 2024-07-27 13:23:32,865 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 13:24:40,370 Relaxation took 68.8s 2024-07-27 13:24:40,370 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.8 pTM=0.497 ipTM=0.636 2024-07-27 13:25:43,652 Relaxation took 63.3s 2024-07-27 13:25:43,652 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.1 pTM=0.499 ipTM=0.633 2024-07-27 13:26:44,955 Relaxation took 61.3s 2024-07-27 13:26:44,955 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.9 pTM=0.484 ipTM=0.615 2024-07-27 13:28:08,110 Relaxation took 83.2s 2024-07-27 13:28:08,110 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.7 pTM=0.498 ipTM=0.597 2024-07-27 13:29:15,471 Relaxation took 67.4s 2024-07-27 13:29:15,472 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.9 pTM=0.487 ipTM=0.54 2024-07-27 13:29:17,264 Done