2024-07-27 12:40:58,940 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 12:40:59,258 Running on GPU
2024-07-27 12:41:02,665 Found 6 citations for tools or databases
2024-07-27 12:41:02,665 Query 1/1: SOX12_COPS8 (length 524)
2024-07-27 12:41:03,121 Sleeping for 7s. Reason: PENDING
2024-07-27 12:41:10,551 Sleeping for 8s. Reason: RUNNING
2024-07-27 12:41:19,021 Sleeping for 9s. Reason: RUNNING
2024-07-27 12:41:28,425 Sleeping for 10s. Reason: RUNNING
2024-07-27 12:41:38,864 Sleeping for 5s. Reason: RUNNING
2024-07-27 12:41:44,295 Sleeping for 8s. Reason: RUNNING
2024-07-27 12:41:52,724 Sleeping for 7s. Reason: RUNNING
2024-07-27 12:42:01,771 Sleeping for 9s. Reason: PENDING
2024-07-27 12:42:11,183 Sleeping for 7s. Reason: RUNNING
2024-07-27 12:42:18,661 Sleeping for 5s. Reason: RUNNING
2024-07-27 12:42:24,089 Sleeping for 6s. Reason: RUNNING
2024-07-27 12:42:32,463 Setting max_seq=508, max_extra_seq=2048
2024-07-27 12:45:09,409 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.39 ipTM=0.175
2024-07-27 12:45:15,504 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.2 pTM=0.385 ipTM=0.18 tol=12.2
2024-07-27 12:45:21,583 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.6 pTM=0.397 ipTM=0.19 tol=9.73
2024-07-27 12:45:27,654 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.1 pTM=0.408 ipTM=0.176 tol=3.86
2024-07-27 12:45:33,728 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.7 pTM=0.415 ipTM=0.21 tol=2.6
2024-07-27 12:45:39,811 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.8 pTM=0.422 ipTM=0.253 tol=3.76
2024-07-27 12:45:45,887 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.8 pTM=0.426 ipTM=0.278 tol=4.67
2024-07-27 12:45:51,989 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.2 pTM=0.439 ipTM=0.321 tol=4.97
2024-07-27 12:45:58,076 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.6 pTM=0.446 ipTM=0.346 tol=2.87
2024-07-27 12:46:04,166 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.9 pTM=0.458 ipTM=0.386 tol=1.74
2024-07-27 12:46:10,266 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.1 pTM=0.466 ipTM=0.401 tol=1.48
2024-07-27 12:46:16,377 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.3 pTM=0.468 ipTM=0.415 tol=1.17
2024-07-27 12:46:22,478 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.1 pTM=0.466 ipTM=0.415 tol=0.736
2024-07-27 12:46:28,579 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.3 pTM=0.466 ipTM=0.42 tol=0.808
2024-07-27 12:46:34,678 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.2 pTM=0.469 ipTM=0.426 tol=0.896
2024-07-27 12:46:40,780 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.3 pTM=0.475 ipTM=0.442 tol=1.1
2024-07-27 12:46:46,887 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.5 pTM=0.473 ipTM=0.443 tol=0.872
2024-07-27 12:46:52,987 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.4 pTM=0.478 ipTM=0.455 tol=0.782
2024-07-27 12:46:59,095 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.6 pTM=0.478 ipTM=0.455 tol=0.8
2024-07-27 12:47:05,192 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.5 pTM=0.475 ipTM=0.45 tol=1.24
2024-07-27 12:47:11,296 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.6 pTM=0.478 ipTM=0.456 tol=1.91
2024-07-27 12:47:17,391 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.1 pTM=0.47 ipTM=0.42 tol=1.84
2024-07-27 12:47:23,502 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.4 pTM=0.48 ipTM=0.458 tol=0.907
2024-07-27 12:47:29,617 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.5 pTM=0.479 ipTM=0.456 tol=0.961
2024-07-27 12:47:35,718 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.6 pTM=0.478 ipTM=0.454 tol=1.02
2024-07-27 12:47:41,827 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.8 pTM=0.477 ipTM=0.455 tol=0.851
2024-07-27 12:47:47,943 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.6 pTM=0.475 ipTM=0.451 tol=0.883
2024-07-27 12:47:54,043 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.6 pTM=0.475 ipTM=0.456 tol=1.04
2024-07-27 12:48:00,141 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.5 pTM=0.472 ipTM=0.443 tol=0.924
2024-07-27 12:48:06,256 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.6 pTM=0.473 ipTM=0.449 tol=0.77
2024-07-27 12:48:12,377 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.6 pTM=0.475 ipTM=0.456 tol=1.16
2024-07-27 12:48:12,378 alphafold2_multimer_v3_model_1_seed_000 took 335.1s (30 recycles)
2024-07-27 12:48:18,686 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.2 pTM=0.388 ipTM=0.13
2024-07-27 12:48:24,826 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.9 pTM=0.378 ipTM=0.131 tol=17.6
2024-07-27 12:48:30,960 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.5 pTM=0.375 ipTM=0.116 tol=5.8
2024-07-27 12:48:37,096 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.1 pTM=0.374 ipTM=0.109 tol=7.09
2024-07-27 12:48:43,249 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.2 pTM=0.378 ipTM=0.116 tol=3.31
2024-07-27 12:48:49,414 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55 pTM=0.376 ipTM=0.111 tol=5.55
2024-07-27 12:48:55,560 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55 pTM=0.376 ipTM=0.112 tol=6.04
2024-07-27 12:49:01,714 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.8 pTM=0.377 ipTM=0.115 tol=7.54
2024-07-27 12:49:07,863 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.2 pTM=0.374 ipTM=0.111 tol=7.68
2024-07-27 12:49:14,000 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.1 pTM=0.376 ipTM=0.114 tol=6.05
2024-07-27 12:49:20,158 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.4 pTM=0.377 ipTM=0.114 tol=7.96
2024-07-27 12:49:26,309 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55 pTM=0.381 ipTM=0.119 tol=6.36
2024-07-27 12:49:32,447 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.9 pTM=0.379 ipTM=0.118 tol=5.57
2024-07-27 12:49:38,600 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.1 pTM=0.378 ipTM=0.117 tol=5.14
2024-07-27 12:49:44,746 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.9 pTM=0.381 ipTM=0.123 tol=1.76
2024-07-27 12:49:50,883 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.2 pTM=0.382 ipTM=0.125 tol=1.75
2024-07-27 12:49:57,036 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.1 pTM=0.382 ipTM=0.124 tol=5.05
2024-07-27 12:50:03,186 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55 pTM=0.38 ipTM=0.122 tol=2.48
2024-07-27 12:50:09,333 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.2 pTM=0.383 ipTM=0.124 tol=1.79
2024-07-27 12:50:15,475 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.9 pTM=0.383 ipTM=0.125 tol=2.62
2024-07-27 12:50:21,614 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.8 pTM=0.384 ipTM=0.126 tol=5.51
2024-07-27 12:50:27,749 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.9 pTM=0.385 ipTM=0.129 tol=5.53
2024-07-27 12:50:33,894 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.1 pTM=0.39 ipTM=0.137 tol=7.41
2024-07-27 12:50:40,046 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.2 pTM=0.394 ipTM=0.151 tol=3.14
2024-07-27 12:50:46,200 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.3 pTM=0.401 ipTM=0.179 tol=1.87
2024-07-27 12:50:52,330 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.2 pTM=0.407 ipTM=0.204 tol=2.72
2024-07-27 12:50:58,476 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.3 pTM=0.407 ipTM=0.198 tol=2.91
2024-07-27 12:51:04,609 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.3 pTM=0.408 ipTM=0.21 tol=4.72
2024-07-27 12:51:10,749 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.3 pTM=0.406 ipTM=0.19 tol=1.27
2024-07-27 12:51:16,898 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.2 pTM=0.406 ipTM=0.18 tol=4.54
2024-07-27 12:51:23,048 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.3 pTM=0.408 ipTM=0.192 tol=1.25
2024-07-27 12:51:23,048 alphafold2_multimer_v3_model_2_seed_000 took 190.5s (30 recycles)
2024-07-27 12:51:29,370 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52 pTM=0.387 ipTM=0.196
2024-07-27 12:51:35,519 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.6 pTM=0.386 ipTM=0.149 tol=8.13
2024-07-27 12:51:41,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.4 pTM=0.393 ipTM=0.158 tol=4.64
2024-07-27 12:51:47,857 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.4 pTM=0.391 ipTM=0.157 tol=3.61
2024-07-27 12:51:54,021 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.5 pTM=0.39 ipTM=0.149 tol=2.67
2024-07-27 12:52:00,191 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.2 pTM=0.389 ipTM=0.141 tol=4.18
2024-07-27 12:52:06,339 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.8 pTM=0.387 ipTM=0.138 tol=2.43
2024-07-27 12:52:12,501 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54 pTM=0.388 ipTM=0.144 tol=2.37
2024-07-27 12:52:18,669 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.1 pTM=0.386 ipTM=0.144 tol=1.47
2024-07-27 12:52:24,820 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.9 pTM=0.387 ipTM=0.148 tol=1.94
2024-07-27 12:52:30,968 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54 pTM=0.389 ipTM=0.183 tol=1.99
2024-07-27 12:52:37,121 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.1 pTM=0.39 ipTM=0.148 tol=1.76
2024-07-27 12:52:43,260 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.8 pTM=0.387 ipTM=0.145 tol=1.48
2024-07-27 12:52:49,432 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.6 pTM=0.386 ipTM=0.146 tol=1.21
2024-07-27 12:52:55,600 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.6 pTM=0.385 ipTM=0.183 tol=2.38
2024-07-27 12:53:01,737 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.5 pTM=0.385 ipTM=0.195 tol=1.92
2024-07-27 12:53:07,902 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.5 pTM=0.385 ipTM=0.184 tol=2.08
2024-07-27 12:53:14,040 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.4 pTM=0.386 ipTM=0.194 tol=2.05
2024-07-27 12:53:20,172 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.7 pTM=0.385 ipTM=0.209 tol=2.39
2024-07-27 12:53:26,325 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.7 pTM=0.385 ipTM=0.2 tol=1.9
2024-07-27 12:53:32,479 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.8 pTM=0.386 ipTM=0.191 tol=2.35
2024-07-27 12:53:38,622 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.7 pTM=0.384 ipTM=0.191 tol=1.45
2024-07-27 12:53:44,793 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.1 pTM=0.388 ipTM=0.184 tol=3.22
2024-07-27 12:53:50,926 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.8 pTM=0.387 ipTM=0.217 tol=3.48
2024-07-27 12:53:57,058 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.8 pTM=0.388 ipTM=0.205 tol=1.76
2024-07-27 12:54:03,191 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.8 pTM=0.389 ipTM=0.215 tol=1.65
2024-07-27 12:54:09,318 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.9 pTM=0.39 ipTM=0.203 tol=2.45
2024-07-27 12:54:15,442 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.6 pTM=0.39 ipTM=0.199 tol=3.6
2024-07-27 12:54:21,566 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.9 pTM=0.389 ipTM=0.194 tol=2.69
2024-07-27 12:54:27,698 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.3 pTM=0.394 ipTM=0.236 tol=1.57
2024-07-27 12:54:33,838 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.1 pTM=0.394 ipTM=0.22 tol=1.67
2024-07-27 12:54:33,838 alphafold2_multimer_v3_model_3_seed_000 took 190.6s (30 recycles)
2024-07-27 12:54:40,122 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.5 pTM=0.38 ipTM=0.151
2024-07-27 12:54:46,251 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.5 pTM=0.369 ipTM=0.155 tol=12.7
2024-07-27 12:54:52,395 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.5 pTM=0.383 ipTM=0.194 tol=18.1
2024-07-27 12:54:58,542 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.6 pTM=0.368 ipTM=0.125 tol=7.3
2024-07-27 12:55:04,679 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53 pTM=0.381 ipTM=0.158 tol=7.39
2024-07-27 12:55:10,831 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.6 pTM=0.367 ipTM=0.128 tol=6.36
2024-07-27 12:55:16,978 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.9 pTM=0.371 ipTM=0.135 tol=6.52
2024-07-27 12:55:23,122 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.7 pTM=0.371 ipTM=0.129 tol=3.82
2024-07-27 12:55:29,259 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.5 pTM=0.378 ipTM=0.143 tol=4.15
2024-07-27 12:55:35,402 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.5 pTM=0.376 ipTM=0.167 tol=4.04
2024-07-27 12:55:41,532 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.3 pTM=0.381 ipTM=0.171 tol=4.58
2024-07-27 12:55:47,668 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.4 pTM=0.39 ipTM=0.182 tol=5.09
2024-07-27 12:55:53,808 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52 pTM=0.379 ipTM=0.157 tol=2.87
2024-07-27 12:55:59,962 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.1 pTM=0.384 ipTM=0.175 tol=3.8
2024-07-27 12:56:06,098 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.4 pTM=0.383 ipTM=0.157 tol=7.89
2024-07-27 12:56:12,223 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.3 pTM=0.386 ipTM=0.164 tol=5.04
2024-07-27 12:56:18,353 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.4 pTM=0.38 ipTM=0.154 tol=2.07
2024-07-27 12:56:24,486 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.2 pTM=0.384 ipTM=0.163 tol=1.82
2024-07-27 12:56:30,620 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.6 pTM=0.381 ipTM=0.15 tol=3.45
2024-07-27 12:56:36,759 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.9 pTM=0.378 ipTM=0.151 tol=3.01
2024-07-27 12:56:42,891 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53 pTM=0.375 ipTM=0.158 tol=1.79
2024-07-27 12:56:49,005 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.5 pTM=0.38 ipTM=0.149 tol=4.09
2024-07-27 12:56:55,142 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.2 pTM=0.383 ipTM=0.171 tol=3.21
2024-07-27 12:57:01,268 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53 pTM=0.378 ipTM=0.153 tol=2.47
2024-07-27 12:57:07,396 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.1 pTM=0.377 ipTM=0.15 tol=1.94
2024-07-27 12:57:13,529 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.1 pTM=0.378 ipTM=0.158 tol=1.68
2024-07-27 12:57:19,653 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.4 pTM=0.379 ipTM=0.155 tol=1.51
2024-07-27 12:57:25,781 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.4 pTM=0.379 ipTM=0.155 tol=1.4
2024-07-27 12:57:31,901 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.8 pTM=0.378 ipTM=0.15 tol=2.27
2024-07-27 12:57:38,025 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.1 pTM=0.382 ipTM=0.17 tol=2.59
2024-07-27 12:57:44,161 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.1 pTM=0.378 ipTM=0.165 tol=2.43
2024-07-27 12:57:44,162 alphafold2_multimer_v3_model_4_seed_000 took 190.1s (30 recycles)
2024-07-27 12:57:50,488 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.8 pTM=0.38 ipTM=0.161
2024-07-27 12:57:56,655 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.5 pTM=0.375 ipTM=0.113 tol=23.2
2024-07-27 12:58:02,814 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.5 pTM=0.368 ipTM=0.0923 tol=15.6
2024-07-27 12:58:08,972 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.5 pTM=0.372 ipTM=0.103 tol=9.34
2024-07-27 12:58:15,131 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.7 pTM=0.373 ipTM=0.105 tol=5.46
2024-07-27 12:58:21,295 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.7 pTM=0.37 ipTM=0.102 tol=3.25
2024-07-27 12:58:27,458 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.6 pTM=0.369 ipTM=0.106 tol=2.84
2024-07-27 12:58:33,623 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.8 pTM=0.372 ipTM=0.104 tol=8.29
2024-07-27 12:58:39,777 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.7 pTM=0.37 ipTM=0.108 tol=6.71
2024-07-27 12:58:45,939 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.8 pTM=0.37 ipTM=0.101 tol=2.03
2024-07-27 12:58:52,099 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.4 pTM=0.369 ipTM=0.102 tol=9.52
2024-07-27 12:58:58,258 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.4 pTM=0.368 ipTM=0.0981 tol=4.13
2024-07-27 12:59:04,423 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.2 pTM=0.367 ipTM=0.0981 tol=2.4
2024-07-27 12:59:10,575 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.2 pTM=0.367 ipTM=0.0983 tol=6.23
2024-07-27 12:59:16,723 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.1 pTM=0.368 ipTM=0.102 tol=2.66
2024-07-27 12:59:22,876 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.1 pTM=0.368 ipTM=0.105 tol=1.28
2024-07-27 12:59:29,038 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.5 pTM=0.368 ipTM=0.105 tol=1.54
2024-07-27 12:59:35,196 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.5 pTM=0.368 ipTM=0.102 tol=8.77
2024-07-27 12:59:41,360 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.5 pTM=0.366 ipTM=0.102 tol=3.86
2024-07-27 12:59:47,510 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.5 pTM=0.367 ipTM=0.104 tol=4.64
2024-07-27 12:59:53,665 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.5 pTM=0.367 ipTM=0.107 tol=1.54
2024-07-27 12:59:59,810 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.3 pTM=0.367 ipTM=0.105 tol=1.23
2024-07-27 13:00:05,968 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.6 pTM=0.369 ipTM=0.107 tol=1.63
2024-07-27 13:00:12,128 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.4 pTM=0.368 ipTM=0.1 tol=1.56
2024-07-27 13:00:18,284 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.2 pTM=0.368 ipTM=0.1 tol=1.96
2024-07-27 13:00:24,453 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.2 pTM=0.365 ipTM=0.101 tol=3.04
2024-07-27 13:00:30,649 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.3 pTM=0.368 ipTM=0.101 tol=9.7
2024-07-27 13:00:36,859 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.3 pTM=0.369 ipTM=0.101 tol=8.88
2024-07-27 13:00:43,069 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.3 pTM=0.367 ipTM=0.0968 tol=2.26
2024-07-27 13:00:49,277 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.5 pTM=0.366 ipTM=0.095 tol=6.98
2024-07-27 13:00:55,478 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.4 pTM=0.368 ipTM=0.101 tol=6.82
2024-07-27 13:00:55,479 alphafold2_multimer_v3_model_5_seed_000 took 191.1s (30 recycles)
2024-07-27 13:00:55,663 reranking models by 'multimer' metric
2024-07-27 13:00:58,350 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 13:01:31,543 Relaxation took 35.9s
2024-07-27 13:01:31,543 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.6 pTM=0.475 ipTM=0.456
2024-07-27 13:01:54,246 Relaxation took 22.7s
2024-07-27 13:01:54,246 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.1 pTM=0.394 ipTM=0.22
2024-07-27 13:02:26,367 Relaxation took 32.1s
2024-07-27 13:02:26,367 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.3 pTM=0.408 ipTM=0.192
2024-07-27 13:05:36,496 Relaxation took 190.1s
2024-07-27 13:05:36,496 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.1 pTM=0.378 ipTM=0.165
2024-07-27 13:05:59,421 Relaxation took 22.9s
2024-07-27 13:05:59,421 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.4 pTM=0.368 ipTM=0.101
2024-07-27 13:06:00,569 Done