2024-07-27 12:57:38,708 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 12:57:39,025 Running on GPU 2024-07-27 12:57:42,729 Found 6 citations for tools or databases 2024-07-27 12:57:42,729 Query 1/1: SOX12_FBXL3 (length 743) 2024-07-27 12:57:43,195 Sleeping for 5s. Reason: PENDING 2024-07-27 12:57:48,612 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:57:54,027 Sleeping for 6s. Reason: RUNNING 2024-07-27 12:58:00,479 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:58:05,920 Sleeping for 7s. Reason: RUNNING 2024-07-27 12:58:13,343 Sleeping for 6s. Reason: RUNNING 2024-07-27 12:58:19,772 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:58:25,179 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:58:35,617 Sleeping for 9s. Reason: RUNNING 2024-07-27 12:58:45,034 Sleeping for 7s. Reason: RUNNING 2024-07-27 12:58:52,460 Sleeping for 6s. Reason: RUNNING 2024-07-27 12:59:00,550 Sleeping for 6s. Reason: PENDING 2024-07-27 12:59:06,997 Sleeping for 6s. Reason: RUNNING 2024-07-27 12:59:13,404 Sleeping for 9s. Reason: RUNNING 2024-07-27 12:59:22,832 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:59:33,276 Sleeping for 5s. Reason: RUNNING 2024-07-27 12:59:38,709 Sleeping for 10s. Reason: RUNNING 2024-07-27 12:59:51,484 Setting max_seq=508, max_extra_seq=2048 2024-07-27 13:03:05,028 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.2 pTM=0.556 ipTM=0.198 2024-07-27 13:03:16,057 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60 pTM=0.58 ipTM=0.235 tol=9.17 2024-07-27 13:03:27,111 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.5 pTM=0.577 ipTM=0.211 tol=4.75 2024-07-27 13:03:38,179 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.3 pTM=0.576 ipTM=0.21 tol=3.8 2024-07-27 13:03:49,247 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.6 pTM=0.577 ipTM=0.214 tol=3.99 2024-07-27 13:04:00,338 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.7 pTM=0.576 ipTM=0.213 tol=3.09 2024-07-27 13:04:11,439 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.6 pTM=0.577 ipTM=0.215 tol=2.88 2024-07-27 13:04:22,555 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61 pTM=0.58 ipTM=0.22 tol=1.73 2024-07-27 13:04:33,673 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.8 pTM=0.576 ipTM=0.212 tol=1.6 2024-07-27 13:04:44,806 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61 pTM=0.579 ipTM=0.217 tol=1.45 2024-07-27 13:04:55,945 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.5 pTM=0.577 ipTM=0.216 tol=1.92 2024-07-27 13:05:07,084 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61 pTM=0.584 ipTM=0.225 tol=3.12 2024-07-27 13:05:18,231 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.7 pTM=0.585 ipTM=0.233 tol=3.18 2024-07-27 13:05:29,389 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.9 pTM=0.586 ipTM=0.23 tol=2.6 2024-07-27 13:05:40,559 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.9 pTM=0.583 ipTM=0.226 tol=1.54 2024-07-27 13:05:51,735 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.6 pTM=0.582 ipTM=0.224 tol=1.75 2024-07-27 13:06:02,908 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.5 pTM=0.579 ipTM=0.22 tol=2.38 2024-07-27 13:06:14,096 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.1 pTM=0.585 ipTM=0.228 tol=1.96 2024-07-27 13:06:25,296 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.3 pTM=0.586 ipTM=0.228 tol=1.02 2024-07-27 13:06:36,487 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61 pTM=0.589 ipTM=0.234 tol=2.56 2024-07-27 13:06:47,667 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.5 pTM=0.583 ipTM=0.23 tol=4.07 2024-07-27 13:06:58,856 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.8 pTM=0.583 ipTM=0.229 tol=3.52 2024-07-27 13:07:10,044 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.8 pTM=0.582 ipTM=0.224 tol=2.28 2024-07-27 13:07:21,237 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.2 pTM=0.584 ipTM=0.229 tol=1.03 2024-07-27 13:07:32,428 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.8 pTM=0.581 ipTM=0.221 tol=1.89 2024-07-27 13:07:43,614 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.6 pTM=0.58 ipTM=0.225 tol=1.71 2024-07-27 13:07:54,794 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.8 pTM=0.582 ipTM=0.225 tol=1.83 2024-07-27 13:08:05,986 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61 pTM=0.584 ipTM=0.229 tol=2.71 2024-07-27 13:08:17,168 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.9 pTM=0.583 ipTM=0.226 tol=2.54 2024-07-27 13:08:28,360 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.2 pTM=0.587 ipTM=0.253 tol=2.04 2024-07-27 13:08:39,551 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.9 pTM=0.583 ipTM=0.223 tol=1.81 2024-07-27 13:08:39,552 alphafold2_multimer_v3_model_1_seed_000 took 523.1s (30 recycles) 2024-07-27 13:08:51,084 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.7 pTM=0.583 ipTM=0.246 2024-07-27 13:09:02,303 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.8 pTM=0.591 ipTM=0.237 tol=8.89 2024-07-27 13:09:13,529 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.6 pTM=0.589 ipTM=0.227 tol=5.79 2024-07-27 13:09:24,754 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.2 pTM=0.588 ipTM=0.269 tol=6.18 2024-07-27 13:09:35,993 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.3 pTM=0.586 ipTM=0.22 tol=3.86 2024-07-27 13:09:47,223 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61 pTM=0.583 ipTM=0.226 tol=1.93 2024-07-27 13:09:58,469 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61 pTM=0.585 ipTM=0.225 tol=3.51 2024-07-27 13:10:09,719 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.2 pTM=0.58 ipTM=0.232 tol=4.55 2024-07-27 13:10:20,965 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.3 pTM=0.583 ipTM=0.225 tol=4.21 2024-07-27 13:10:32,203 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.4 pTM=0.58 ipTM=0.232 tol=2.66 2024-07-27 13:10:43,446 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.1 pTM=0.584 ipTM=0.227 tol=3.56 2024-07-27 13:10:54,695 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.2 pTM=0.58 ipTM=0.244 tol=5.93 2024-07-27 13:11:05,936 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.3 pTM=0.583 ipTM=0.224 tol=3.14 2024-07-27 13:11:17,173 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.2 pTM=0.583 ipTM=0.235 tol=3 2024-07-27 13:11:28,423 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.9 pTM=0.583 ipTM=0.22 tol=3.13 2024-07-27 13:11:39,652 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.1 pTM=0.585 ipTM=0.226 tol=2.5 2024-07-27 13:11:50,888 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.8 pTM=0.581 ipTM=0.216 tol=3.68 2024-07-27 13:12:02,132 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.3 pTM=0.583 ipTM=0.252 tol=2.54 2024-07-27 13:12:13,384 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.4 pTM=0.586 ipTM=0.228 tol=1.81 2024-07-27 13:12:24,633 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.4 pTM=0.586 ipTM=0.241 tol=3.23 2024-07-27 13:12:35,881 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.8 pTM=0.586 ipTM=0.217 tol=2.46 2024-07-27 13:12:47,132 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.1 pTM=0.586 ipTM=0.27 tol=3.64 2024-07-27 13:12:58,393 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61 pTM=0.589 ipTM=0.23 tol=2.3 2024-07-27 13:13:09,648 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.9 pTM=0.582 ipTM=0.219 tol=2.7 2024-07-27 13:13:20,906 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.8 pTM=0.587 ipTM=0.213 tol=2.02 2024-07-27 13:13:32,165 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.6 pTM=0.58 ipTM=0.229 tol=4.1 2024-07-27 13:13:43,440 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61 pTM=0.583 ipTM=0.228 tol=5.17 2024-07-27 13:13:54,695 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61 pTM=0.582 ipTM=0.253 tol=1.71 2024-07-27 13:14:05,943 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.8 pTM=0.584 ipTM=0.226 tol=2.48 2024-07-27 13:14:17,196 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.8 pTM=0.582 ipTM=0.242 tol=3.76 2024-07-27 13:14:28,454 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.7 pTM=0.585 ipTM=0.226 tol=2.9 2024-07-27 13:14:28,455 alphafold2_multimer_v3_model_2_seed_000 took 348.5s (30 recycles) 2024-07-27 13:14:40,048 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.4 pTM=0.562 ipTM=0.246 2024-07-27 13:14:51,321 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.9 pTM=0.589 ipTM=0.426 tol=7.88 2024-07-27 13:15:02,597 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.1 pTM=0.578 ipTM=0.268 tol=8.38 2024-07-27 13:15:13,853 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.8 pTM=0.58 ipTM=0.21 tol=8.5 2024-07-27 13:15:25,114 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.6 pTM=0.576 ipTM=0.197 tol=5.99 2024-07-27 13:15:36,383 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.5 pTM=0.571 ipTM=0.21 tol=7.66 2024-07-27 13:15:47,654 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.2 pTM=0.581 ipTM=0.217 tol=5.19 2024-07-27 13:15:58,926 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.1 pTM=0.573 ipTM=0.24 tol=3.42 2024-07-27 13:16:10,198 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.8 pTM=0.59 ipTM=0.394 tol=9.4 2024-07-27 13:16:21,485 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.8 pTM=0.566 ipTM=0.173 tol=6.13 2024-07-27 13:16:32,782 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.6 pTM=0.576 ipTM=0.218 tol=6.15 2024-07-27 13:16:44,067 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.8 pTM=0.57 ipTM=0.183 tol=3.74 2024-07-27 13:16:55,353 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.6 pTM=0.583 ipTM=0.309 tol=3.66 2024-07-27 13:17:06,633 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.7 pTM=0.568 ipTM=0.183 tol=3.78 2024-07-27 13:17:17,923 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.6 pTM=0.571 ipTM=0.188 tol=3.21 2024-07-27 13:17:29,204 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.6 pTM=0.571 ipTM=0.188 tol=2.98 2024-07-27 13:17:40,494 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.5 pTM=0.576 ipTM=0.253 tol=3.44 2024-07-27 13:17:51,797 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.8 pTM=0.57 ipTM=0.208 tol=3.14 2024-07-27 13:18:03,106 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.8 pTM=0.592 ipTM=0.428 tol=5.7 2024-07-27 13:18:14,410 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.6 pTM=0.568 ipTM=0.182 tol=4.34 2024-07-27 13:18:25,702 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.5 pTM=0.578 ipTM=0.263 tol=4.78 2024-07-27 13:18:37,007 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.5 pTM=0.568 ipTM=0.179 tol=5.82 2024-07-27 13:18:48,312 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.7 pTM=0.581 ipTM=0.284 tol=5.2 2024-07-27 13:18:59,606 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.1 pTM=0.568 ipTM=0.177 tol=5.85 2024-07-27 13:19:10,889 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61 pTM=0.58 ipTM=0.277 tol=3.51 2024-07-27 13:19:22,177 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.1 pTM=0.57 ipTM=0.182 tol=3.3 2024-07-27 13:19:33,460 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61 pTM=0.581 ipTM=0.244 tol=2.94 2024-07-27 13:19:44,748 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61 pTM=0.573 ipTM=0.205 tol=2.96 2024-07-27 13:19:56,025 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.1 pTM=0.588 ipTM=0.339 tol=3.41 2024-07-27 13:20:07,300 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.2 pTM=0.572 ipTM=0.2 tol=3.95 2024-07-27 13:20:18,578 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61 pTM=0.577 ipTM=0.206 tol=3.24 2024-07-27 13:20:18,578 alphafold2_multimer_v3_model_3_seed_000 took 349.8s (30 recycles) 2024-07-27 13:20:30,281 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.4 pTM=0.581 ipTM=0.239 2024-07-27 13:20:41,523 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.5 pTM=0.59 ipTM=0.341 tol=4.86 2024-07-27 13:20:52,769 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.6 pTM=0.583 ipTM=0.376 tol=7.95 2024-07-27 13:21:04,007 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.1 pTM=0.586 ipTM=0.353 tol=4.13 2024-07-27 13:21:15,259 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.1 pTM=0.589 ipTM=0.325 tol=4.68 2024-07-27 13:21:26,497 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.8 pTM=0.583 ipTM=0.244 tol=4.57 2024-07-27 13:21:37,742 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.4 pTM=0.576 ipTM=0.212 tol=3.59 2024-07-27 13:21:48,990 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.9 pTM=0.58 ipTM=0.204 tol=11.8 2024-07-27 13:22:00,233 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.2 pTM=0.575 ipTM=0.205 tol=3.68 2024-07-27 13:22:11,492 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.4 pTM=0.577 ipTM=0.215 tol=3.34 2024-07-27 13:22:22,742 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.3 pTM=0.575 ipTM=0.211 tol=2.76 2024-07-27 13:22:33,973 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60 pTM=0.578 ipTM=0.201 tol=4.05 2024-07-27 13:22:45,213 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.6 pTM=0.574 ipTM=0.214 tol=2.5 2024-07-27 13:22:56,451 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.1 pTM=0.576 ipTM=0.207 tol=4.64 2024-07-27 13:23:07,727 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.6 pTM=0.576 ipTM=0.21 tol=3.73 2024-07-27 13:23:18,969 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.1 pTM=0.578 ipTM=0.211 tol=2.79 2024-07-27 13:23:30,221 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.9 pTM=0.577 ipTM=0.211 tol=4.54 2024-07-27 13:23:41,485 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.2 pTM=0.572 ipTM=0.193 tol=4.8 2024-07-27 13:23:52,738 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.4 pTM=0.573 ipTM=0.2 tol=2.33 2024-07-27 13:24:04,018 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.4 pTM=0.577 ipTM=0.206 tol=2.17 2024-07-27 13:24:15,258 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60 pTM=0.575 ipTM=0.202 tol=2.56 2024-07-27 13:24:26,527 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.4 pTM=0.574 ipTM=0.196 tol=2.88 2024-07-27 13:24:37,795 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.3 pTM=0.575 ipTM=0.19 tol=6.68 2024-07-27 13:24:49,053 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.3 pTM=0.573 ipTM=0.191 tol=3.12 2024-07-27 13:25:00,323 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60 pTM=0.573 ipTM=0.203 tol=3.43 2024-07-27 13:25:11,615 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.1 pTM=0.573 ipTM=0.208 tol=3.04 2024-07-27 13:25:22,879 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.1 pTM=0.575 ipTM=0.191 tol=4.39 2024-07-27 13:25:34,149 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.5 pTM=0.572 ipTM=0.192 tol=3.49 2024-07-27 13:25:45,400 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60 pTM=0.571 ipTM=0.19 tol=3.58 2024-07-27 13:25:56,651 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.4 pTM=0.573 ipTM=0.201 tol=3.5 2024-07-27 13:26:07,901 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.576 ipTM=0.195 tol=1.95 2024-07-27 13:26:07,901 alphafold2_multimer_v3_model_4_seed_000 took 348.8s (30 recycles) 2024-07-27 13:26:19,484 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.8 pTM=0.564 ipTM=0.257 2024-07-27 13:26:30,757 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.6 pTM=0.598 ipTM=0.402 tol=12.2 2024-07-27 13:26:42,035 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.569 ipTM=0.191 tol=5.45 2024-07-27 13:26:53,299 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.1 pTM=0.581 ipTM=0.211 tol=7.21 2024-07-27 13:27:04,559 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.2 pTM=0.59 ipTM=0.286 tol=5.58 2024-07-27 13:27:15,823 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.7 pTM=0.578 ipTM=0.203 tol=7.38 2024-07-27 13:27:27,089 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.6 pTM=0.582 ipTM=0.21 tol=4.51 2024-07-27 13:27:38,352 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.4 pTM=0.596 ipTM=0.308 tol=4.46 2024-07-27 13:27:49,613 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.7 pTM=0.608 ipTM=0.422 tol=4.12 2024-07-27 13:28:00,869 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.5 pTM=0.607 ipTM=0.451 tol=6.93 2024-07-27 13:28:12,103 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.8 pTM=0.612 ipTM=0.459 tol=1.82 2024-07-27 13:28:23,342 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.2 pTM=0.617 ipTM=0.48 tol=1.47 2024-07-27 13:28:34,592 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.2 pTM=0.617 ipTM=0.468 tol=3.69 2024-07-27 13:28:45,842 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.4 pTM=0.616 ipTM=0.501 tol=3.47 2024-07-27 13:28:57,101 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.2 pTM=0.611 ipTM=0.458 tol=2.66 2024-07-27 13:29:08,354 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.4 pTM=0.615 ipTM=0.496 tol=0.941 2024-07-27 13:29:19,622 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.8 pTM=0.603 ipTM=0.38 tol=2.37 2024-07-27 13:29:30,888 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.9 pTM=0.622 ipTM=0.538 tol=3.19 2024-07-27 13:29:42,159 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.6 pTM=0.607 ipTM=0.436 tol=3.27 2024-07-27 13:29:53,416 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.7 pTM=0.617 ipTM=0.483 tol=3.85 2024-07-27 13:30:04,675 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.2 pTM=0.604 ipTM=0.375 tol=1.63 2024-07-27 13:30:15,933 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.6 pTM=0.614 ipTM=0.469 tol=2.63 2024-07-27 13:30:27,192 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.4 pTM=0.604 ipTM=0.379 tol=2.75 2024-07-27 13:30:38,460 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.9 pTM=0.617 ipTM=0.51 tol=1.08 2024-07-27 13:30:49,715 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.3 pTM=0.605 ipTM=0.426 tol=2.94 2024-07-27 13:31:00,974 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.5 pTM=0.612 ipTM=0.49 tol=2.8 2024-07-27 13:31:12,219 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.3 pTM=0.604 ipTM=0.445 tol=1.4 2024-07-27 13:31:23,471 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.2 pTM=0.605 ipTM=0.42 tol=1.63 2024-07-27 13:31:34,718 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.5 pTM=0.595 ipTM=0.327 tol=3.09 2024-07-27 13:31:45,975 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.8 pTM=0.601 ipTM=0.352 tol=2.95 2024-07-27 13:31:57,230 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.7 pTM=0.598 ipTM=0.334 tol=0.887 2024-07-27 13:31:57,230 alphafold2_multimer_v3_model_5_seed_000 took 349.0s (30 recycles) 2024-07-27 13:31:57,587 reranking models by 'multimer' metric 2024-07-27 13:31:59,562 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 13:33:24,529 Relaxation took 86.9s 2024-07-27 13:33:24,530 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.7 pTM=0.598 ipTM=0.334 2024-07-27 13:34:29,452 Relaxation took 64.9s 2024-07-27 13:34:29,452 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.7 pTM=0.585 ipTM=0.226 2024-07-27 13:35:55,255 Relaxation took 85.8s 2024-07-27 13:35:55,255 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.9 pTM=0.583 ipTM=0.223 2024-07-27 13:37:14,312 Relaxation took 79.1s 2024-07-27 13:37:14,313 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61 pTM=0.577 ipTM=0.206 2024-07-27 13:38:15,684 Relaxation took 61.4s 2024-07-27 13:38:15,684 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.576 ipTM=0.195 2024-07-27 13:38:17,182 Done