2024-07-27 13:00:18,917 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 13:00:19,232 Running on GPU 2024-07-27 13:00:22,494 Found 6 citations for tools or databases 2024-07-27 13:00:22,495 Query 1/1: SOX12_FBXO33 (length 870) 2024-07-27 13:00:22,939 Sleeping for 5s. Reason: PENDING 2024-07-27 13:00:28,352 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:00:37,780 Sleeping for 5s. Reason: RUNNING 2024-07-27 13:00:43,207 Sleeping for 5s. Reason: RUNNING 2024-07-27 13:00:48,623 Sleeping for 10s. Reason: RUNNING 2024-07-27 13:00:59,043 Sleeping for 6s. Reason: RUNNING 2024-07-27 13:01:05,468 Sleeping for 6s. Reason: RUNNING 2024-07-27 13:01:11,881 Sleeping for 6s. Reason: RUNNING 2024-07-27 13:01:18,307 Sleeping for 7s. Reason: RUNNING 2024-07-27 13:01:25,750 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:01:34,180 Sleeping for 7s. Reason: RUNNING 2024-07-27 13:01:41,606 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:01:51,697 Sleeping for 7s. Reason: PENDING 2024-07-27 13:01:59,101 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:02:07,529 Sleeping for 10s. Reason: RUNNING 2024-07-27 13:02:17,935 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:02:26,349 Sleeping for 5s. Reason: RUNNING 2024-07-27 13:02:31,766 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:02:43,717 Setting max_seq=508, max_extra_seq=2048 2024-07-27 13:05:50,076 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.4 pTM=0.584 ipTM=0.217 2024-07-27 13:06:05,830 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.8 pTM=0.589 ipTM=0.199 tol=8.62 2024-07-27 13:06:21,634 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.1 pTM=0.59 ipTM=0.198 tol=3.65 2024-07-27 13:06:37,479 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.3 pTM=0.592 ipTM=0.204 tol=3.6 2024-07-27 13:06:53,384 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.3 pTM=0.59 ipTM=0.197 tol=4.27 2024-07-27 13:07:09,328 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.7 pTM=0.594 ipTM=0.202 tol=3.14 2024-07-27 13:07:25,271 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.7 pTM=0.59 ipTM=0.195 tol=1.87 2024-07-27 13:07:41,258 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.7 pTM=0.596 ipTM=0.235 tol=2.16 2024-07-27 13:07:57,246 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.6 pTM=0.591 ipTM=0.199 tol=1.61 2024-07-27 13:08:13,228 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.5 pTM=0.589 ipTM=0.195 tol=1.68 2024-07-27 13:08:29,240 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.5 pTM=0.591 ipTM=0.22 tol=1.85 2024-07-27 13:08:45,255 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.594 ipTM=0.207 tol=1.69 2024-07-27 13:09:01,276 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.8 pTM=0.593 ipTM=0.205 tol=1.62 2024-07-27 13:09:17,313 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.7 pTM=0.594 ipTM=0.204 tol=1.89 2024-07-27 13:09:33,354 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.8 pTM=0.595 ipTM=0.209 tol=1.37 2024-07-27 13:09:49,399 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.7 pTM=0.593 ipTM=0.201 tol=2.97 2024-07-27 13:10:05,465 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.1 pTM=0.598 ipTM=0.214 tol=2.34 2024-07-27 13:10:21,531 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.9 pTM=0.594 ipTM=0.222 tol=1.96 2024-07-27 13:10:37,579 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.8 pTM=0.593 ipTM=0.205 tol=2.37 2024-07-27 13:10:53,606 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.8 pTM=0.594 ipTM=0.204 tol=3.04 2024-07-27 13:11:09,609 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.6 pTM=0.594 ipTM=0.213 tol=2.3 2024-07-27 13:11:25,626 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.7 pTM=0.593 ipTM=0.204 tol=1.98 2024-07-27 13:11:41,652 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.8 pTM=0.593 ipTM=0.21 tol=1.96 2024-07-27 13:11:57,666 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.8 pTM=0.595 ipTM=0.209 tol=2.1 2024-07-27 13:12:13,679 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.9 pTM=0.595 ipTM=0.211 tol=1.62 2024-07-27 13:12:29,686 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.8 pTM=0.592 ipTM=0.204 tol=1.48 2024-07-27 13:12:45,706 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.8 pTM=0.593 ipTM=0.205 tol=2.31 2024-07-27 13:13:01,726 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.7 pTM=0.594 ipTM=0.233 tol=4.28 2024-07-27 13:13:17,742 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.6 pTM=0.593 ipTM=0.204 tol=2.48 2024-07-27 13:13:33,762 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.7 pTM=0.594 ipTM=0.203 tol=3.61 2024-07-27 13:13:49,789 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60 pTM=0.595 ipTM=0.214 tol=3.16 2024-07-27 13:13:49,790 alphafold2_multimer_v3_model_1_seed_000 took 662.5s (30 recycles) 2024-07-27 13:14:06,302 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.1 pTM=0.583 ipTM=0.208 2024-07-27 13:14:22,404 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.9 pTM=0.595 ipTM=0.208 tol=7.43 2024-07-27 13:14:38,490 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.7 pTM=0.592 ipTM=0.217 tol=4.57 2024-07-27 13:14:54,601 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.7 pTM=0.59 ipTM=0.193 tol=2.67 2024-07-27 13:15:10,702 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.7 pTM=0.591 ipTM=0.192 tol=4.12 2024-07-27 13:15:26,810 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.8 pTM=0.591 ipTM=0.188 tol=3.74 2024-07-27 13:15:42,919 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.8 pTM=0.59 ipTM=0.187 tol=2.5 2024-07-27 13:15:59,008 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.9 pTM=0.591 ipTM=0.188 tol=1.61 2024-07-27 13:16:15,078 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60 pTM=0.591 ipTM=0.19 tol=1.98 2024-07-27 13:16:31,175 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.9 pTM=0.589 ipTM=0.185 tol=1.59 2024-07-27 13:16:47,256 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.1 pTM=0.592 ipTM=0.273 tol=2.25 2024-07-27 13:17:03,356 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.9 pTM=0.595 ipTM=0.205 tol=1.99 2024-07-27 13:17:19,437 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60 pTM=0.592 ipTM=0.188 tol=2.17 2024-07-27 13:17:35,512 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.8 pTM=0.593 ipTM=0.193 tol=2.07 2024-07-27 13:17:51,597 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60 pTM=0.593 ipTM=0.193 tol=4.37 2024-07-27 13:18:07,676 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.1 pTM=0.591 ipTM=0.187 tol=3.64 2024-07-27 13:18:23,734 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.2 pTM=0.594 ipTM=0.192 tol=1.77 2024-07-27 13:18:39,816 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.1 pTM=0.591 ipTM=0.186 tol=3.13 2024-07-27 13:18:55,893 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.2 pTM=0.592 ipTM=0.189 tol=1.97 2024-07-27 13:19:11,964 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.2 pTM=0.593 ipTM=0.189 tol=1.37 2024-07-27 13:19:28,055 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.1 pTM=0.594 ipTM=0.19 tol=1.78 2024-07-27 13:19:44,106 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.9 pTM=0.595 ipTM=0.196 tol=2.15 2024-07-27 13:20:00,192 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.1 pTM=0.593 ipTM=0.19 tol=4.63 2024-07-27 13:20:16,266 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60 pTM=0.592 ipTM=0.193 tol=3.08 2024-07-27 13:20:32,344 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.9 pTM=0.595 ipTM=0.2 tol=2.1 2024-07-27 13:20:48,423 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.8 pTM=0.593 ipTM=0.191 tol=1.76 2024-07-27 13:21:04,501 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.2 pTM=0.595 ipTM=0.195 tol=1.22 2024-07-27 13:21:20,567 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60 pTM=0.594 ipTM=0.192 tol=1.55 2024-07-27 13:21:36,620 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60 pTM=0.597 ipTM=0.29 tol=1.49 2024-07-27 13:21:52,662 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60 pTM=0.595 ipTM=0.191 tol=3.21 2024-07-27 13:22:08,714 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.1 pTM=0.596 ipTM=0.19 tol=2.57 2024-07-27 13:22:08,714 alphafold2_multimer_v3_model_2_seed_000 took 498.5s (30 recycles) 2024-07-27 13:22:25,262 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.3 pTM=0.592 ipTM=0.234 2024-07-27 13:22:41,390 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.4 pTM=0.612 ipTM=0.356 tol=5.96 2024-07-27 13:22:57,521 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60 pTM=0.603 ipTM=0.273 tol=4.85 2024-07-27 13:23:13,632 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.9 pTM=0.596 ipTM=0.245 tol=4.8 2024-07-27 13:23:29,730 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.8 pTM=0.597 ipTM=0.26 tol=2.25 2024-07-27 13:23:45,827 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.8 pTM=0.595 ipTM=0.238 tol=2.1 2024-07-27 13:24:01,899 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.4 pTM=0.598 ipTM=0.262 tol=4.33 2024-07-27 13:24:17,978 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.5 pTM=0.594 ipTM=0.224 tol=3.07 2024-07-27 13:24:34,051 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.593 ipTM=0.228 tol=2.87 2024-07-27 13:24:50,109 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.4 pTM=0.591 ipTM=0.223 tol=2.45 2024-07-27 13:25:06,153 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.4 pTM=0.592 ipTM=0.229 tol=4.6 2024-07-27 13:25:22,234 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.7 pTM=0.596 ipTM=0.231 tol=1.91 2024-07-27 13:25:38,314 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.6 pTM=0.596 ipTM=0.226 tol=1.91 2024-07-27 13:25:54,371 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.2 pTM=0.59 ipTM=0.203 tol=2.1 2024-07-27 13:26:10,456 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.2 pTM=0.594 ipTM=0.208 tol=3.51 2024-07-27 13:26:26,554 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.3 pTM=0.591 ipTM=0.197 tol=2.54 2024-07-27 13:26:42,663 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.8 pTM=0.592 ipTM=0.195 tol=4.19 2024-07-27 13:26:58,754 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.6 pTM=0.593 ipTM=0.209 tol=3.15 2024-07-27 13:27:14,845 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.5 pTM=0.592 ipTM=0.214 tol=1.67 2024-07-27 13:27:30,956 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.3 pTM=0.591 ipTM=0.196 tol=2.36 2024-07-27 13:27:47,060 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.4 pTM=0.593 ipTM=0.203 tol=1.85 2024-07-27 13:28:03,149 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.5 pTM=0.591 ipTM=0.203 tol=2.32 2024-07-27 13:28:19,241 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.5 pTM=0.595 ipTM=0.207 tol=2.13 2024-07-27 13:28:35,355 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.6 pTM=0.594 ipTM=0.205 tol=1.73 2024-07-27 13:28:51,455 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.2 pTM=0.596 ipTM=0.217 tol=2.99 2024-07-27 13:29:07,570 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.6 pTM=0.591 ipTM=0.203 tol=2.36 2024-07-27 13:29:23,654 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.4 pTM=0.592 ipTM=0.228 tol=1.98 2024-07-27 13:29:39,731 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.5 pTM=0.591 ipTM=0.212 tol=1.84 2024-07-27 13:29:55,803 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.4 pTM=0.597 ipTM=0.239 tol=1.84 2024-07-27 13:30:11,899 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.8 pTM=0.594 ipTM=0.225 tol=1.88 2024-07-27 13:30:27,996 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.4 pTM=0.598 ipTM=0.234 tol=1.83 2024-07-27 13:30:27,997 alphafold2_multimer_v3_model_3_seed_000 took 498.8s (30 recycles) 2024-07-27 13:30:44,497 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.6 pTM=0.592 ipTM=0.235 2024-07-27 13:31:00,596 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.8 pTM=0.594 ipTM=0.226 tol=8.7 2024-07-27 13:31:16,730 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.8 pTM=0.589 ipTM=0.208 tol=5.54 2024-07-27 13:31:32,850 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.9 pTM=0.586 ipTM=0.208 tol=4.55 2024-07-27 13:31:48,960 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.7 pTM=0.587 ipTM=0.197 tol=4.55 2024-07-27 13:32:05,058 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.1 pTM=0.591 ipTM=0.198 tol=2.92 2024-07-27 13:32:21,169 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.2 pTM=0.593 ipTM=0.202 tol=2.61 2024-07-27 13:32:37,265 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59 pTM=0.592 ipTM=0.2 tol=4.59 2024-07-27 13:32:53,369 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.3 pTM=0.59 ipTM=0.195 tol=6.02 2024-07-27 13:33:09,458 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.1 pTM=0.588 ipTM=0.195 tol=4.86 2024-07-27 13:33:25,548 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.2 pTM=0.587 ipTM=0.191 tol=2.91 2024-07-27 13:33:41,651 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.4 pTM=0.589 ipTM=0.197 tol=3.79 2024-07-27 13:33:57,745 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.4 pTM=0.589 ipTM=0.199 tol=5.54 2024-07-27 13:34:13,819 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.2 pTM=0.588 ipTM=0.197 tol=5.33 2024-07-27 13:34:29,916 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.7 pTM=0.589 ipTM=0.205 tol=4.45 2024-07-27 13:34:46,013 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.7 pTM=0.586 ipTM=0.201 tol=3.53 2024-07-27 13:35:02,134 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.8 pTM=0.588 ipTM=0.199 tol=6.71 2024-07-27 13:35:18,242 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.8 pTM=0.589 ipTM=0.21 tol=5.31 2024-07-27 13:35:34,359 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.5 pTM=0.583 ipTM=0.192 tol=3.55 2024-07-27 13:35:50,486 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.4 pTM=0.587 ipTM=0.198 tol=5.86 2024-07-27 13:36:06,588 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.4 pTM=0.585 ipTM=0.19 tol=6.17 2024-07-27 13:36:22,699 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.4 pTM=0.586 ipTM=0.198 tol=2.34 2024-07-27 13:36:38,798 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.5 pTM=0.587 ipTM=0.194 tol=3.75 2024-07-27 13:36:54,899 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.5 pTM=0.587 ipTM=0.198 tol=2.47 2024-07-27 13:37:10,995 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.2 pTM=0.583 ipTM=0.192 tol=3.69 2024-07-27 13:37:27,095 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.4 pTM=0.585 ipTM=0.193 tol=4.3 2024-07-27 13:37:43,191 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.2 pTM=0.584 ipTM=0.195 tol=3.65 2024-07-27 13:37:59,287 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.4 pTM=0.587 ipTM=0.192 tol=5 2024-07-27 13:38:15,381 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.7 pTM=0.591 ipTM=0.2 tol=2.42 2024-07-27 13:38:31,465 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.7 pTM=0.593 ipTM=0.208 tol=2.49 2024-07-27 13:38:47,570 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.596 ipTM=0.212 tol=4.5 2024-07-27 13:38:47,571 alphafold2_multimer_v3_model_4_seed_000 took 499.1s (30 recycles) 2024-07-27 13:39:04,079 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.3 pTM=0.586 ipTM=0.239 2024-07-27 13:39:20,159 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.1 pTM=0.615 ipTM=0.349 tol=6.77 2024-07-27 13:39:36,262 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.602 ipTM=0.234 tol=3.37 2024-07-27 13:39:52,364 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.2 pTM=0.608 ipTM=0.264 tol=2.8 2024-07-27 13:40:08,470 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.8 pTM=0.6 ipTM=0.211 tol=1.51 2024-07-27 13:40:24,605 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.8 pTM=0.601 ipTM=0.226 tol=1.74 2024-07-27 13:40:40,703 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.7 pTM=0.601 ipTM=0.248 tol=2.6 2024-07-27 13:40:56,809 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.9 pTM=0.601 ipTM=0.222 tol=1.14 2024-07-27 13:41:12,922 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.7 pTM=0.6 ipTM=0.213 tol=2.08 2024-07-27 13:41:29,032 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.5 pTM=0.6 ipTM=0.233 tol=2.32 2024-07-27 13:41:45,137 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.5 pTM=0.596 ipTM=0.213 tol=2.23 2024-07-27 13:42:01,240 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.6 pTM=0.599 ipTM=0.229 tol=1.79 2024-07-27 13:42:17,346 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.6 pTM=0.595 ipTM=0.212 tol=2.32 2024-07-27 13:42:33,466 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.5 pTM=0.593 ipTM=0.215 tol=2 2024-07-27 13:42:49,596 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.8 pTM=0.597 ipTM=0.216 tol=1.62 2024-07-27 13:43:05,729 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.8 pTM=0.598 ipTM=0.226 tol=1.65 2024-07-27 13:43:21,844 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.8 pTM=0.598 ipTM=0.218 tol=2 2024-07-27 13:43:37,966 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.8 pTM=0.597 ipTM=0.229 tol=2.16 2024-07-27 13:43:54,089 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.6 pTM=0.596 ipTM=0.215 tol=1.84 2024-07-27 13:44:10,199 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.8 pTM=0.596 ipTM=0.216 tol=1.34 2024-07-27 13:44:26,337 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.8 pTM=0.597 ipTM=0.219 tol=2.72 2024-07-27 13:44:42,452 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.6 pTM=0.598 ipTM=0.233 tol=2.75 2024-07-27 13:44:58,565 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.7 pTM=0.597 ipTM=0.218 tol=1.68 2024-07-27 13:45:14,670 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.7 pTM=0.599 ipTM=0.24 tol=2.12 2024-07-27 13:45:30,773 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.5 pTM=0.597 ipTM=0.226 tol=2.12 2024-07-27 13:45:46,899 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.6 pTM=0.601 ipTM=0.228 tol=2.76 2024-07-27 13:46:03,011 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.6 pTM=0.595 ipTM=0.215 tol=2.35 2024-07-27 13:46:19,142 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.4 pTM=0.598 ipTM=0.23 tol=1.89 2024-07-27 13:46:35,274 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.8 pTM=0.597 ipTM=0.225 tol=2.86 2024-07-27 13:46:51,391 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.6 pTM=0.618 ipTM=0.434 tol=3.78 2024-07-27 13:47:07,515 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.9 pTM=0.596 ipTM=0.219 tol=3.4 2024-07-27 13:47:07,516 alphafold2_multimer_v3_model_5_seed_000 took 499.5s (30 recycles) 2024-07-27 13:47:07,989 reranking models by 'multimer' metric 2024-07-27 13:47:08,845 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 13:49:11,505 Relaxation took 123.5s 2024-07-27 13:49:11,506 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.4 pTM=0.598 ipTM=0.234 2024-07-27 13:50:16,182 Relaxation took 64.7s 2024-07-27 13:50:16,182 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.9 pTM=0.596 ipTM=0.219 2024-07-27 13:51:21,638 Relaxation took 65.5s 2024-07-27 13:51:21,638 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60 pTM=0.595 ipTM=0.214 2024-07-27 14:01:11,380 Relaxation took 589.7s 2024-07-27 14:01:11,380 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.596 ipTM=0.212 2024-07-27 14:02:04,816 Relaxation took 53.4s 2024-07-27 14:02:04,816 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.1 pTM=0.596 ipTM=0.19 2024-07-27 14:02:06,493 Done