2024-07-27 13:06:33,393 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 13:06:33,718 Running on GPU 2024-07-27 13:06:37,261 Found 6 citations for tools or databases 2024-07-27 13:06:37,261 Query 1/1: SOX12_FBXW9 (length 773) 2024-07-27 13:06:37,714 Sleeping for 7s. Reason: PENDING 2024-07-27 13:06:45,160 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:06:53,592 Sleeping for 10s. Reason: RUNNING 2024-07-27 13:07:04,020 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:07:12,441 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:07:20,876 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:07:30,317 Sleeping for 7s. Reason: RUNNING 2024-07-27 13:07:37,755 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:07:46,184 Sleeping for 7s. Reason: RUNNING 2024-07-27 13:07:53,657 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:08:02,085 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:08:10,500 Sleeping for 5s. Reason: RUNNING 2024-07-27 13:08:15,932 Sleeping for 10s. Reason: RUNNING 2024-07-27 13:08:26,355 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:08:35,789 Sleeping for 10s. Reason: RUNNING 2024-07-27 13:08:46,246 Sleeping for 6s. Reason: RUNNING 2024-07-27 13:08:52,706 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:09:02,134 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:09:13,202 Sleeping for 9s. Reason: PENDING 2024-07-27 13:09:22,637 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:09:31,081 Sleeping for 6s. Reason: RUNNING 2024-07-27 13:09:37,517 Sleeping for 6s. Reason: RUNNING 2024-07-27 13:09:43,969 Sleeping for 9s. Reason: RUNNING 2024-07-27 13:09:53,387 Sleeping for 5s. Reason: RUNNING 2024-07-27 13:09:58,820 Sleeping for 7s. Reason: RUNNING 2024-07-27 13:10:06,246 Sleeping for 8s. Reason: RUNNING 2024-07-27 13:10:14,699 Sleeping for 10s. Reason: RUNNING 2024-07-27 13:10:27,508 Setting max_seq=508, max_extra_seq=2048 2024-07-27 13:13:54,864 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.4 pTM=0.542 ipTM=0.279 2024-07-27 13:14:06,993 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.7 pTM=0.543 ipTM=0.264 tol=5.21 2024-07-27 13:14:19,177 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.4 pTM=0.543 ipTM=0.496 tol=4.88 2024-07-27 13:14:31,372 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.8 pTM=0.542 ipTM=0.453 tol=4.05 2024-07-27 13:14:43,595 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.9 pTM=0.544 ipTM=0.463 tol=3.07 2024-07-27 13:14:55,815 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.9 pTM=0.542 ipTM=0.429 tol=3 2024-07-27 13:15:08,027 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.2 pTM=0.542 ipTM=0.469 tol=2.95 2024-07-27 13:15:20,238 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.2 pTM=0.542 ipTM=0.457 tol=1.25 2024-07-27 13:15:32,472 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.5 pTM=0.543 ipTM=0.446 tol=2.64 2024-07-27 13:15:44,698 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.4 pTM=0.542 ipTM=0.437 tol=2.23 2024-07-27 13:15:56,924 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.1 pTM=0.541 ipTM=0.453 tol=2.01 2024-07-27 13:16:09,159 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.6 pTM=0.542 ipTM=0.442 tol=1.2 2024-07-27 13:16:21,415 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.2 pTM=0.54 ipTM=0.433 tol=2.56 2024-07-27 13:16:33,669 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.2 pTM=0.542 ipTM=0.435 tol=3.74 2024-07-27 13:16:45,923 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.2 pTM=0.543 ipTM=0.455 tol=1.41 2024-07-27 13:16:58,183 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.2 pTM=0.542 ipTM=0.438 tol=2.28 2024-07-27 13:17:10,437 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.4 pTM=0.549 ipTM=0.478 tol=3.32 2024-07-27 13:17:22,672 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.5 pTM=0.55 ipTM=0.445 tol=1.97 2024-07-27 13:17:34,930 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.3 pTM=0.552 ipTM=0.467 tol=1.11 2024-07-27 13:17:47,186 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.1 pTM=0.549 ipTM=0.471 tol=0.984 2024-07-27 13:17:59,456 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.4 pTM=0.551 ipTM=0.465 tol=1.8 2024-07-27 13:18:11,729 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.4 pTM=0.548 ipTM=0.446 tol=2.25 2024-07-27 13:18:23,992 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.3 pTM=0.551 ipTM=0.476 tol=1.56 2024-07-27 13:18:36,256 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.3 pTM=0.549 ipTM=0.444 tol=2.58 2024-07-27 13:18:48,539 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.5 pTM=0.553 ipTM=0.479 tol=0.959 2024-07-27 13:19:00,825 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.4 pTM=0.551 ipTM=0.475 tol=2.46 2024-07-27 13:19:13,088 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.4 pTM=0.552 ipTM=0.461 tol=3.32 2024-07-27 13:19:25,350 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.4 pTM=0.551 ipTM=0.45 tol=4.6 2024-07-27 13:19:37,616 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.4 pTM=0.554 ipTM=0.477 tol=2.71 2024-07-27 13:19:49,882 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.1 pTM=0.549 ipTM=0.453 tol=3.27 2024-07-27 13:20:02,155 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.1 pTM=0.55 ipTM=0.46 tol=2.78 2024-07-27 13:20:02,155 alphafold2_multimer_v3_model_1_seed_000 took 569.7s (30 recycles) 2024-07-27 13:20:14,842 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.8 pTM=0.548 ipTM=0.505 2024-07-27 13:20:27,165 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.3 pTM=0.541 ipTM=0.307 tol=11 2024-07-27 13:20:39,507 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.1 pTM=0.541 ipTM=0.285 tol=14.4 2024-07-27 13:20:51,842 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.5 pTM=0.544 ipTM=0.429 tol=6.24 2024-07-27 13:21:04,197 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.8 pTM=0.548 ipTM=0.422 tol=4.33 2024-07-27 13:21:16,559 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.1 pTM=0.545 ipTM=0.424 tol=5.46 2024-07-27 13:21:28,895 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.3 pTM=0.548 ipTM=0.462 tol=5.77 2024-07-27 13:21:41,216 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.2 pTM=0.546 ipTM=0.434 tol=4.88 2024-07-27 13:21:53,529 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.3 pTM=0.548 ipTM=0.408 tol=3.96 2024-07-27 13:22:05,849 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.2 pTM=0.543 ipTM=0.408 tol=2.66 2024-07-27 13:22:18,182 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.3 pTM=0.544 ipTM=0.462 tol=2.02 2024-07-27 13:22:30,540 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.5 pTM=0.547 ipTM=0.491 tol=4.28 2024-07-27 13:22:42,863 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.2 pTM=0.543 ipTM=0.44 tol=2.81 2024-07-27 13:22:55,224 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.7 pTM=0.546 ipTM=0.452 tol=3.59 2024-07-27 13:23:07,546 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.3 pTM=0.545 ipTM=0.461 tol=2.21 2024-07-27 13:23:19,885 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.4 pTM=0.549 ipTM=0.468 tol=2.23 2024-07-27 13:23:32,225 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.5 pTM=0.551 ipTM=0.47 tol=3.54 2024-07-27 13:23:44,579 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.8 pTM=0.55 ipTM=0.462 tol=1.44 2024-07-27 13:23:56,870 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.5 pTM=0.549 ipTM=0.473 tol=1.16 2024-07-27 13:24:09,178 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.7 pTM=0.549 ipTM=0.496 tol=2.6 2024-07-27 13:24:21,478 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.6 pTM=0.55 ipTM=0.488 tol=2.54 2024-07-27 13:24:33,761 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.6 pTM=0.547 ipTM=0.466 tol=1.72 2024-07-27 13:24:46,064 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.5 pTM=0.547 ipTM=0.475 tol=1.79 2024-07-27 13:24:58,384 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.8 pTM=0.549 ipTM=0.493 tol=2.16 2024-07-27 13:25:10,673 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.6 pTM=0.551 ipTM=0.497 tol=2.08 2024-07-27 13:25:22,980 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.4 pTM=0.549 ipTM=0.488 tol=2.15 2024-07-27 13:25:35,277 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.7 pTM=0.548 ipTM=0.496 tol=2.05 2024-07-27 13:25:47,577 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.5 pTM=0.548 ipTM=0.486 tol=1.58 2024-07-27 13:25:59,868 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.5 pTM=0.547 ipTM=0.486 tol=1.49 2024-07-27 13:26:12,172 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.4 pTM=0.549 ipTM=0.479 tol=1.19 2024-07-27 13:26:24,487 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.4 pTM=0.548 ipTM=0.474 tol=2.03 2024-07-27 13:26:24,487 alphafold2_multimer_v3_model_2_seed_000 took 382.0s (30 recycles) 2024-07-27 13:26:37,199 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60 pTM=0.564 ipTM=0.26 2024-07-27 13:26:49,533 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.7 pTM=0.547 ipTM=0.202 tol=13.8 2024-07-27 13:27:01,866 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.9 pTM=0.544 ipTM=0.198 tol=12.7 2024-07-27 13:27:14,191 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59 pTM=0.542 ipTM=0.24 tol=5.66 2024-07-27 13:27:26,541 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.2 pTM=0.546 ipTM=0.262 tol=5.9 2024-07-27 13:27:38,885 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.3 pTM=0.547 ipTM=0.266 tol=5.53 2024-07-27 13:27:51,222 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.2 pTM=0.549 ipTM=0.254 tol=4.32 2024-07-27 13:28:03,569 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.1 pTM=0.548 ipTM=0.225 tol=5.68 2024-07-27 13:28:15,942 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.6 pTM=0.551 ipTM=0.238 tol=3.14 2024-07-27 13:28:28,292 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.2 pTM=0.548 ipTM=0.219 tol=2.02 2024-07-27 13:28:40,663 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.3 pTM=0.55 ipTM=0.219 tol=1.64 2024-07-27 13:28:53,017 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.4 pTM=0.55 ipTM=0.213 tol=1.79 2024-07-27 13:29:05,361 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.4 pTM=0.549 ipTM=0.232 tol=3.42 2024-07-27 13:29:17,701 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.3 pTM=0.55 ipTM=0.233 tol=3.32 2024-07-27 13:29:30,028 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.2 pTM=0.548 ipTM=0.231 tol=2.77 2024-07-27 13:29:42,362 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.3 pTM=0.552 ipTM=0.249 tol=1.79 2024-07-27 13:29:54,703 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.4 pTM=0.554 ipTM=0.253 tol=2.23 2024-07-27 13:30:07,027 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.2 pTM=0.553 ipTM=0.24 tol=2.32 2024-07-27 13:30:19,374 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.5 pTM=0.554 ipTM=0.233 tol=1.67 2024-07-27 13:30:31,712 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.1 pTM=0.551 ipTM=0.241 tol=1.84 2024-07-27 13:30:44,038 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.1 pTM=0.552 ipTM=0.236 tol=2.41 2024-07-27 13:30:56,378 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.3 pTM=0.552 ipTM=0.241 tol=1.07 2024-07-27 13:31:08,705 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.3 pTM=0.551 ipTM=0.232 tol=2.04 2024-07-27 13:31:21,045 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.4 pTM=0.552 ipTM=0.232 tol=1.53 2024-07-27 13:31:33,387 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.9 pTM=0.549 ipTM=0.23 tol=2.01 2024-07-27 13:31:45,722 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59 pTM=0.549 ipTM=0.229 tol=1.9 2024-07-27 13:31:58,071 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.2 pTM=0.548 ipTM=0.234 tol=1.6 2024-07-27 13:32:10,390 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59 pTM=0.549 ipTM=0.227 tol=2.32 2024-07-27 13:32:22,736 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59 pTM=0.547 ipTM=0.231 tol=2.96 2024-07-27 13:32:35,075 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.1 pTM=0.548 ipTM=0.237 tol=1.8 2024-07-27 13:32:47,415 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.1 pTM=0.546 ipTM=0.244 tol=2.51 2024-07-27 13:32:47,415 alphafold2_multimer_v3_model_3_seed_000 took 382.5s (30 recycles) 2024-07-27 13:33:00,118 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.6 pTM=0.554 ipTM=0.446 2024-07-27 13:33:12,442 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.5 pTM=0.542 ipTM=0.25 tol=8.56 2024-07-27 13:33:24,752 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.5 pTM=0.547 ipTM=0.198 tol=10 2024-07-27 13:33:37,072 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.561 ipTM=0.341 tol=5.61 2024-07-27 13:33:49,416 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60 pTM=0.549 ipTM=0.409 tol=4.22 2024-07-27 13:34:01,768 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.7 pTM=0.553 ipTM=0.403 tol=3.82 2024-07-27 13:34:14,120 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.8 pTM=0.554 ipTM=0.441 tol=3.5 2024-07-27 13:34:26,443 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.9 pTM=0.555 ipTM=0.423 tol=3.67 2024-07-27 13:34:38,769 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.2 pTM=0.555 ipTM=0.438 tol=3.35 2024-07-27 13:34:51,116 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.7 pTM=0.554 ipTM=0.426 tol=2.67 2024-07-27 13:35:03,454 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.7 pTM=0.557 ipTM=0.467 tol=2.19 2024-07-27 13:35:15,808 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.3 pTM=0.557 ipTM=0.441 tol=2.38 2024-07-27 13:35:28,172 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.1 pTM=0.557 ipTM=0.448 tol=1.94 2024-07-27 13:35:40,521 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.1 pTM=0.557 ipTM=0.452 tol=2.06 2024-07-27 13:35:52,877 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.7 pTM=0.561 ipTM=0.46 tol=2.02 2024-07-27 13:36:05,240 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.9 pTM=0.559 ipTM=0.437 tol=3.2 2024-07-27 13:36:17,599 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.3 pTM=0.561 ipTM=0.462 tol=3.44 2024-07-27 13:36:29,953 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.4 pTM=0.562 ipTM=0.459 tol=1.32 2024-07-27 13:36:42,304 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.3 pTM=0.56 ipTM=0.477 tol=1.78 2024-07-27 13:36:54,643 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61 pTM=0.561 ipTM=0.479 tol=2.02 2024-07-27 13:37:07,000 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.9 pTM=0.558 ipTM=0.489 tol=1.64 2024-07-27 13:37:19,356 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.1 pTM=0.56 ipTM=0.48 tol=1.32 2024-07-27 13:37:31,683 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.4 pTM=0.562 ipTM=0.497 tol=1.81 2024-07-27 13:37:44,029 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.5 pTM=0.563 ipTM=0.502 tol=1.37 2024-07-27 13:37:56,383 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.7 pTM=0.566 ipTM=0.508 tol=1.09 2024-07-27 13:38:08,743 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.8 pTM=0.566 ipTM=0.509 tol=1.6 2024-07-27 13:38:21,088 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.5 pTM=0.573 ipTM=0.517 tol=1.97 2024-07-27 13:38:33,423 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.1 pTM=0.568 ipTM=0.499 tol=2.03 2024-07-27 13:38:45,760 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.2 pTM=0.573 ipTM=0.509 tol=1.63 2024-07-27 13:38:58,092 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.4 pTM=0.574 ipTM=0.517 tol=1.7 2024-07-27 13:39:10,434 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.9 pTM=0.582 ipTM=0.518 tol=2.86 2024-07-27 13:39:10,435 alphafold2_multimer_v3_model_4_seed_000 took 382.6s (30 recycles) 2024-07-27 13:39:23,183 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.1 pTM=0.535 ipTM=0.18 2024-07-27 13:39:35,542 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.1 pTM=0.534 ipTM=0.184 tol=9.4 2024-07-27 13:39:47,908 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.8 pTM=0.53 ipTM=0.171 tol=4.39 2024-07-27 13:40:00,292 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.3 pTM=0.536 ipTM=0.221 tol=5.88 2024-07-27 13:40:12,668 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.5 pTM=0.54 ipTM=0.242 tol=4.11 2024-07-27 13:40:25,052 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.5 pTM=0.537 ipTM=0.201 tol=3.71 2024-07-27 13:40:37,442 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.4 pTM=0.537 ipTM=0.209 tol=3.52 2024-07-27 13:40:49,822 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.6 pTM=0.539 ipTM=0.195 tol=3.83 2024-07-27 13:41:02,219 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.8 pTM=0.538 ipTM=0.214 tol=3.74 2024-07-27 13:41:14,605 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.4 pTM=0.539 ipTM=0.211 tol=3.07 2024-07-27 13:41:26,983 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.6 pTM=0.54 ipTM=0.208 tol=4.87 2024-07-27 13:41:39,361 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.6 pTM=0.539 ipTM=0.229 tol=2.75 2024-07-27 13:41:51,752 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.5 pTM=0.538 ipTM=0.219 tol=3.1 2024-07-27 13:42:04,142 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.7 pTM=0.541 ipTM=0.207 tol=2.58 2024-07-27 13:42:16,527 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.5 pTM=0.54 ipTM=0.246 tol=3.71 2024-07-27 13:42:28,919 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.3 pTM=0.541 ipTM=0.213 tol=2.94 2024-07-27 13:42:41,322 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.6 pTM=0.542 ipTM=0.223 tol=1.81 2024-07-27 13:42:53,726 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.6 pTM=0.542 ipTM=0.246 tol=4.92 2024-07-27 13:43:06,122 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.5 pTM=0.544 ipTM=0.241 tol=3.3 2024-07-27 13:43:18,513 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.2 pTM=0.54 ipTM=0.233 tol=3.86 2024-07-27 13:43:30,906 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.5 pTM=0.542 ipTM=0.262 tol=2.25 2024-07-27 13:43:43,303 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.6 pTM=0.541 ipTM=0.214 tol=3.31 2024-07-27 13:43:55,694 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.4 pTM=0.539 ipTM=0.196 tol=2.7 2024-07-27 13:44:08,089 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.4 pTM=0.539 ipTM=0.207 tol=3.63 2024-07-27 13:44:20,492 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.3 pTM=0.538 ipTM=0.206 tol=3.46 2024-07-27 13:44:32,879 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.3 pTM=0.537 ipTM=0.191 tol=4.59 2024-07-27 13:44:45,270 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.7 pTM=0.537 ipTM=0.202 tol=2.96 2024-07-27 13:44:57,658 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.4 pTM=0.538 ipTM=0.193 tol=4.04 2024-07-27 13:45:10,035 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.6 pTM=0.538 ipTM=0.199 tol=3.23 2024-07-27 13:45:22,405 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.4 pTM=0.536 ipTM=0.202 tol=2.32 2024-07-27 13:45:34,777 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.2 pTM=0.539 ipTM=0.209 tol=6.41 2024-07-27 13:45:34,778 alphafold2_multimer_v3_model_5_seed_000 took 384.0s (30 recycles) 2024-07-27 13:45:35,160 reranking models by 'multimer' metric 2024-07-27 13:45:37,264 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 13:46:25,526 Relaxation took 50.4s 2024-07-27 13:46:25,527 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.9 pTM=0.582 ipTM=0.518 2024-07-27 13:54:09,928 Relaxation took 464.4s 2024-07-27 13:54:09,928 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.4 pTM=0.548 ipTM=0.474 2024-07-27 13:54:59,034 Relaxation took 49.1s 2024-07-27 13:54:59,034 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.1 pTM=0.55 ipTM=0.46 2024-07-27 13:55:55,552 Relaxation took 56.5s 2024-07-27 13:55:55,552 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.1 pTM=0.546 ipTM=0.244 2024-07-27 13:57:05,040 Relaxation took 69.5s 2024-07-27 13:57:05,040 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.2 pTM=0.539 ipTM=0.209 2024-07-27 13:57:06,820 Done