2024-07-27 13:21:59,679 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 13:22:00,010 Running on GPU
2024-07-27 13:22:03,483 Found 6 citations for tools or databases
2024-07-27 13:22:03,483 Query 1/1: SOX12_KCTD6 (length 552)
2024-07-27 13:22:03,944 Sleeping for 10s. Reason: PENDING
2024-07-27 13:22:14,372 Sleeping for 10s. Reason: RUNNING
2024-07-27 13:22:24,803 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:22:32,244 Sleeping for 8s. Reason: RUNNING
2024-07-27 13:22:40,662 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:22:50,090 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:22:57,524 Sleeping for 10s. Reason: RUNNING
2024-07-27 13:23:09,625 Sleeping for 6s. Reason: PENDING
2024-07-27 13:23:16,037 Sleeping for 8s. Reason: RUNNING
2024-07-27 13:23:24,479 Sleeping for 10s. Reason: RUNNING
2024-07-27 13:23:34,888 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:23:46,685 Setting max_seq=508, max_extra_seq=2048
2024-07-27 13:26:06,657 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.313 ipTM=0.177
2024-07-27 13:26:12,786 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.1 pTM=0.321 ipTM=0.288 tol=14.7
2024-07-27 13:26:18,932 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.1 pTM=0.307 ipTM=0.193 tol=6.62
2024-07-27 13:26:25,059 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.5 pTM=0.313 ipTM=0.168 tol=4.43
2024-07-27 13:26:31,185 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.2 pTM=0.305 ipTM=0.197 tol=4.58
2024-07-27 13:26:37,319 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.7 pTM=0.307 ipTM=0.205 tol=3
2024-07-27 13:26:43,459 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.5 pTM=0.301 ipTM=0.195 tol=3.4
2024-07-27 13:26:49,600 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.3 pTM=0.308 ipTM=0.212 tol=4.64
2024-07-27 13:26:55,736 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.6 pTM=0.305 ipTM=0.205 tol=3.74
2024-07-27 13:27:01,873 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.3 pTM=0.318 ipTM=0.241 tol=4.95
2024-07-27 13:27:08,023 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.3 pTM=0.305 ipTM=0.199 tol=2.15
2024-07-27 13:27:14,161 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.2 pTM=0.31 ipTM=0.169 tol=2.32
2024-07-27 13:27:20,316 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.7 pTM=0.302 ipTM=0.191 tol=2.51
2024-07-27 13:27:26,454 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.2 pTM=0.312 ipTM=0.216 tol=2.15
2024-07-27 13:27:32,606 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.6 pTM=0.302 ipTM=0.206 tol=4.46
2024-07-27 13:27:38,770 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52 pTM=0.307 ipTM=0.224 tol=2.36
2024-07-27 13:27:44,925 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.7 pTM=0.309 ipTM=0.214 tol=3.44
2024-07-27 13:27:51,081 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.4 pTM=0.314 ipTM=0.22 tol=2.84
2024-07-27 13:27:57,246 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.4 pTM=0.303 ipTM=0.206 tol=3.55
2024-07-27 13:28:03,409 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.9 pTM=0.314 ipTM=0.222 tol=3.44
2024-07-27 13:28:09,573 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.1 pTM=0.304 ipTM=0.197 tol=3.99
2024-07-27 13:28:15,735 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.7 pTM=0.312 ipTM=0.188 tol=3.89
2024-07-27 13:28:21,901 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.2 pTM=0.306 ipTM=0.213 tol=3.42
2024-07-27 13:28:28,055 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.323 ipTM=0.236 tol=2.4
2024-07-27 13:28:34,224 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.9 pTM=0.303 ipTM=0.206 tol=2.68
2024-07-27 13:28:40,386 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.1 pTM=0.312 ipTM=0.175 tol=2.93
2024-07-27 13:28:46,551 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.9 pTM=0.301 ipTM=0.182 tol=3.44
2024-07-27 13:28:52,716 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.7 pTM=0.317 ipTM=0.234 tol=2.72
2024-07-27 13:28:58,895 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.3 pTM=0.305 ipTM=0.197 tol=5.11
2024-07-27 13:29:05,063 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.8 pTM=0.308 ipTM=0.164 tol=3.71
2024-07-27 13:29:11,231 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.4 pTM=0.301 ipTM=0.191 tol=2.16
2024-07-27 13:29:11,231 alphafold2_multimer_v3_model_1_seed_000 took 319.7s (30 recycles)
2024-07-27 13:29:17,612 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.2 pTM=0.358 ipTM=0.365
2024-07-27 13:29:23,797 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.2 pTM=0.286 ipTM=0.148 tol=17.4
2024-07-27 13:29:29,980 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.3 pTM=0.297 ipTM=0.151 tol=14.7
2024-07-27 13:29:36,161 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.6 pTM=0.311 ipTM=0.19 tol=8.16
2024-07-27 13:29:42,349 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.9 pTM=0.302 ipTM=0.148 tol=4.12
2024-07-27 13:29:48,531 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.9 pTM=0.311 ipTM=0.17 tol=4.88
2024-07-27 13:29:54,718 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.7 pTM=0.313 ipTM=0.156 tol=4.16
2024-07-27 13:30:00,897 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.8 pTM=0.349 ipTM=0.292 tol=3.6
2024-07-27 13:30:07,085 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.8 pTM=0.33 ipTM=0.213 tol=4.23
2024-07-27 13:30:13,268 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.7 pTM=0.334 ipTM=0.215 tol=3.05
2024-07-27 13:30:19,455 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.8 pTM=0.364 ipTM=0.326 tol=2.9
2024-07-27 13:30:25,637 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.3 pTM=0.336 ipTM=0.257 tol=1.98
2024-07-27 13:30:31,820 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.2 pTM=0.352 ipTM=0.276 tol=2.33
2024-07-27 13:30:37,996 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.5 pTM=0.329 ipTM=0.236 tol=1.5
2024-07-27 13:30:44,183 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.6 pTM=0.336 ipTM=0.225 tol=2.66
2024-07-27 13:30:50,368 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.8 pTM=0.335 ipTM=0.24 tol=2.77
2024-07-27 13:30:56,560 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54 pTM=0.351 ipTM=0.289 tol=2.19
2024-07-27 13:31:02,748 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.8 pTM=0.329 ipTM=0.219 tol=2.26
2024-07-27 13:31:08,934 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54 pTM=0.337 ipTM=0.235 tol=1.98
2024-07-27 13:31:15,123 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.1 pTM=0.359 ipTM=0.317 tol=2.57
2024-07-27 13:31:21,305 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.6 pTM=0.362 ipTM=0.349 tol=1.63
2024-07-27 13:31:27,493 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54 pTM=0.353 ipTM=0.314 tol=1.75
2024-07-27 13:31:33,683 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.2 pTM=0.353 ipTM=0.292 tol=1.97
2024-07-27 13:31:39,874 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.8 pTM=0.34 ipTM=0.251 tol=2.18
2024-07-27 13:31:46,067 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.7 pTM=0.341 ipTM=0.229 tol=2.97
2024-07-27 13:31:52,253 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.9 pTM=0.357 ipTM=0.313 tol=2.39
2024-07-27 13:31:58,452 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.6 pTM=0.362 ipTM=0.339 tol=1.88
2024-07-27 13:32:04,634 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.8 pTM=0.337 ipTM=0.268 tol=1.87
2024-07-27 13:32:10,820 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.8 pTM=0.34 ipTM=0.241 tol=2.34
2024-07-27 13:32:17,012 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.4 pTM=0.325 ipTM=0.215 tol=2.58
2024-07-27 13:32:23,194 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.5 pTM=0.335 ipTM=0.242 tol=2.65
2024-07-27 13:32:23,194 alphafold2_multimer_v3_model_2_seed_000 took 191.8s (30 recycles)
2024-07-27 13:32:29,627 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.1 pTM=0.306 ipTM=0.187
2024-07-27 13:32:35,837 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.4 pTM=0.373 ipTM=0.379 tol=9.09
2024-07-27 13:32:42,050 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.1 pTM=0.32 ipTM=0.21 tol=6.99
2024-07-27 13:32:48,254 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.9 pTM=0.331 ipTM=0.224 tol=8.73
2024-07-27 13:32:54,467 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.3 pTM=0.306 ipTM=0.144 tol=6.55
2024-07-27 13:33:00,678 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52 pTM=0.304 ipTM=0.16 tol=4.1
2024-07-27 13:33:06,892 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.8 pTM=0.299 ipTM=0.15 tol=4.63
2024-07-27 13:33:13,104 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.9 pTM=0.294 ipTM=0.156 tol=2.84
2024-07-27 13:33:19,313 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.1 pTM=0.303 ipTM=0.146 tol=3.76
2024-07-27 13:33:25,527 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.5 pTM=0.301 ipTM=0.165 tol=6.73
2024-07-27 13:33:31,744 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.2 pTM=0.297 ipTM=0.143 tol=4.73
2024-07-27 13:33:37,951 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.6 pTM=0.292 ipTM=0.151 tol=6.22
2024-07-27 13:33:44,162 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51 pTM=0.291 ipTM=0.14 tol=2.76
2024-07-27 13:33:50,369 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.4 pTM=0.296 ipTM=0.157 tol=2.85
2024-07-27 13:33:56,581 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.3 pTM=0.293 ipTM=0.14 tol=2.23
2024-07-27 13:34:02,785 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.2 pTM=0.294 ipTM=0.161 tol=1.7
2024-07-27 13:34:08,994 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.1 pTM=0.299 ipTM=0.142 tol=3.03
2024-07-27 13:34:15,212 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.1 pTM=0.302 ipTM=0.159 tol=3.53
2024-07-27 13:34:21,432 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52 pTM=0.302 ipTM=0.152 tol=3.36
2024-07-27 13:34:27,646 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.9 pTM=0.304 ipTM=0.173 tol=2.73
2024-07-27 13:34:33,851 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.8 pTM=0.327 ipTM=0.416 tol=10.4
2024-07-27 13:34:40,049 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.4 pTM=0.317 ipTM=0.364 tol=11.1
2024-07-27 13:34:46,248 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.2 pTM=0.313 ipTM=0.343 tol=8.54
2024-07-27 13:34:52,461 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.9 pTM=0.315 ipTM=0.341 tol=10.5
2024-07-27 13:34:58,669 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.8 pTM=0.316 ipTM=0.336 tol=6.59
2024-07-27 13:35:04,878 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.3 pTM=0.31 ipTM=0.322 tol=6.46
2024-07-27 13:35:11,090 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.7 pTM=0.314 ipTM=0.333 tol=5.2
2024-07-27 13:35:17,304 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.8 pTM=0.314 ipTM=0.319 tol=3.62
2024-07-27 13:35:23,525 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54 pTM=0.319 ipTM=0.338 tol=3.27
2024-07-27 13:35:29,746 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.8 pTM=0.315 ipTM=0.332 tol=4.57
2024-07-27 13:35:35,960 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.8 pTM=0.319 ipTM=0.327 tol=4.65
2024-07-27 13:35:35,960 alphafold2_multimer_v3_model_3_seed_000 took 192.6s (30 recycles)
2024-07-27 13:35:42,360 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.1 pTM=0.332 ipTM=0.24
2024-07-27 13:35:48,552 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.9 pTM=0.312 ipTM=0.183 tol=18.4
2024-07-27 13:35:54,742 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.2 pTM=0.324 ipTM=0.344 tol=13
2024-07-27 13:36:00,939 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.5 pTM=0.313 ipTM=0.291 tol=7.38
2024-07-27 13:36:07,135 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.9 pTM=0.31 ipTM=0.274 tol=7.8
2024-07-27 13:36:13,331 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.7 pTM=0.316 ipTM=0.335 tol=6.48
2024-07-27 13:36:19,528 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.9 pTM=0.318 ipTM=0.359 tol=5.29
2024-07-27 13:36:25,721 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51 pTM=0.313 ipTM=0.319 tol=4.01
2024-07-27 13:36:31,907 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.3 pTM=0.312 ipTM=0.3 tol=3.04
2024-07-27 13:36:38,097 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.2 pTM=0.316 ipTM=0.329 tol=3.14
2024-07-27 13:36:44,280 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.7 pTM=0.321 ipTM=0.353 tol=2.79
2024-07-27 13:36:50,466 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.9 pTM=0.313 ipTM=0.314 tol=4.4
2024-07-27 13:36:56,656 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50 pTM=0.309 ipTM=0.304 tol=3.53
2024-07-27 13:37:02,843 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.2 pTM=0.313 ipTM=0.354 tol=3.52
2024-07-27 13:37:09,029 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.6 pTM=0.313 ipTM=0.354 tol=3.04
2024-07-27 13:37:15,215 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.7 pTM=0.306 ipTM=0.314 tol=1.98
2024-07-27 13:37:21,400 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.5 pTM=0.315 ipTM=0.372 tol=3.59
2024-07-27 13:37:27,586 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.9 pTM=0.312 ipTM=0.365 tol=4.1
2024-07-27 13:37:33,766 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.9 pTM=0.313 ipTM=0.338 tol=2.38
2024-07-27 13:37:39,944 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.8 pTM=0.313 ipTM=0.329 tol=2.71
2024-07-27 13:37:46,124 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.8 pTM=0.311 ipTM=0.312 tol=2.81
2024-07-27 13:37:52,305 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51 pTM=0.312 ipTM=0.329 tol=1.98
2024-07-27 13:37:58,488 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.7 pTM=0.306 ipTM=0.306 tol=2.79
2024-07-27 13:38:04,672 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.2 pTM=0.3 ipTM=0.271 tol=4.45
2024-07-27 13:38:10,856 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.1 pTM=0.302 ipTM=0.284 tol=4.98
2024-07-27 13:38:17,045 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.1 pTM=0.309 ipTM=0.339 tol=7.93
2024-07-27 13:38:23,233 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.5 pTM=0.304 ipTM=0.301 tol=3.65
2024-07-27 13:38:29,402 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.7 pTM=0.309 ipTM=0.319 tol=1.7
2024-07-27 13:38:35,586 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.7 pTM=0.317 ipTM=0.373 tol=2.68
2024-07-27 13:38:41,770 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.3 pTM=0.32 ipTM=0.369 tol=3.36
2024-07-27 13:38:47,946 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.8 pTM=0.318 ipTM=0.337 tol=3.26
2024-07-27 13:38:47,946 alphafold2_multimer_v3_model_4_seed_000 took 191.8s (30 recycles)
2024-07-27 13:38:54,381 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.9 pTM=0.294 ipTM=0.145
2024-07-27 13:39:00,606 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.1 pTM=0.332 ipTM=0.228 tol=15.4
2024-07-27 13:39:06,814 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.4 pTM=0.347 ipTM=0.279 tol=9.8
2024-07-27 13:39:13,028 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.9 pTM=0.33 ipTM=0.214 tol=7.52
2024-07-27 13:39:19,239 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.1 pTM=0.363 ipTM=0.3 tol=7.92
2024-07-27 13:39:25,447 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.3 pTM=0.362 ipTM=0.313 tol=4.88
2024-07-27 13:39:31,661 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.2 pTM=0.36 ipTM=0.315 tol=4.9
2024-07-27 13:39:37,872 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.5 pTM=0.372 ipTM=0.346 tol=1.95
2024-07-27 13:39:44,077 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.3 pTM=0.364 ipTM=0.329 tol=4.73
2024-07-27 13:39:50,284 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.8 pTM=0.376 ipTM=0.356 tol=5.27
2024-07-27 13:39:56,492 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.7 pTM=0.37 ipTM=0.347 tol=3.34
2024-07-27 13:40:02,707 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55 pTM=0.372 ipTM=0.343 tol=5.07
2024-07-27 13:40:08,912 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.4 pTM=0.387 ipTM=0.375 tol=3.39
2024-07-27 13:40:15,116 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.7 pTM=0.392 ipTM=0.383 tol=4.75
2024-07-27 13:40:21,319 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.4 pTM=0.414 ipTM=0.452 tol=11.8
2024-07-27 13:40:27,515 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57 pTM=0.41 ipTM=0.433 tol=8.23
2024-07-27 13:40:33,708 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.8 pTM=0.421 ipTM=0.429 tol=5.32
2024-07-27 13:40:39,900 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.2 pTM=0.432 ipTM=0.432 tol=5.07
2024-07-27 13:40:46,087 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.6 pTM=0.449 ipTM=0.429 tol=4.9
2024-07-27 13:40:52,270 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.2 pTM=0.452 ipTM=0.443 tol=3.71
2024-07-27 13:40:58,448 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.9 pTM=0.44 ipTM=0.418 tol=2.38
2024-07-27 13:41:04,630 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.3 pTM=0.456 ipTM=0.441 tol=2.45
2024-07-27 13:41:10,820 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.8 pTM=0.458 ipTM=0.441 tol=2.69
2024-07-27 13:41:17,002 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.6 pTM=0.45 ipTM=0.442 tol=2.18
2024-07-27 13:41:23,179 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.7 pTM=0.456 ipTM=0.443 tol=2.22
2024-07-27 13:41:29,353 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.4 pTM=0.448 ipTM=0.431 tol=2.92
2024-07-27 13:41:35,542 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.6 pTM=0.448 ipTM=0.437 tol=2.52
2024-07-27 13:41:41,727 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.8 pTM=0.449 ipTM=0.43 tol=1.55
2024-07-27 13:41:47,907 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.5 pTM=0.449 ipTM=0.434 tol=1.97
2024-07-27 13:41:54,090 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.4 pTM=0.444 ipTM=0.422 tol=3.03
2024-07-27 13:42:00,274 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59 pTM=0.454 ipTM=0.446 tol=2.68
2024-07-27 13:42:00,274 alphafold2_multimer_v3_model_5_seed_000 took 192.1s (30 recycles)
2024-07-27 13:42:00,482 reranking models by 'multimer' metric
2024-07-27 13:42:03,292 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 13:42:39,461 Relaxation took 39.0s
2024-07-27 13:42:39,461 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59 pTM=0.454 ipTM=0.446
2024-07-27 13:43:12,549 Relaxation took 33.1s
2024-07-27 13:43:12,550 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.8 pTM=0.318 ipTM=0.337
2024-07-27 13:43:45,017 Relaxation took 32.5s
2024-07-27 13:43:45,017 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.8 pTM=0.319 ipTM=0.327
2024-07-27 13:44:23,556 Relaxation took 38.5s
2024-07-27 13:44:23,556 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.5 pTM=0.335 ipTM=0.242
2024-07-27 13:44:54,090 Relaxation took 30.5s
2024-07-27 13:44:54,090 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.4 pTM=0.301 ipTM=0.191
2024-07-27 13:44:55,196 Done