2024-07-27 13:26:37,411 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 13:26:37,761 Running on GPU
2024-07-27 13:26:40,655 Found 6 citations for tools or databases
2024-07-27 13:26:40,655 Query 1/1: SOX12_KCTD9 (length 704)
2024-07-27 13:26:41,097 Sleeping for 5s. Reason: PENDING
2024-07-27 13:26:46,503 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:26:55,932 Sleeping for 6s. Reason: RUNNING
2024-07-27 13:27:02,346 Sleeping for 5s. Reason: RUNNING
2024-07-27 13:27:07,809 Sleeping for 8s. Reason: RUNNING
2024-07-27 13:27:16,242 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:27:23,682 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:27:33,116 Sleeping for 6s. Reason: RUNNING
2024-07-27 13:27:41,232 Sleeping for 7s. Reason: PENDING
2024-07-27 13:27:48,657 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:27:58,092 Sleeping for 10s. Reason: RUNNING
2024-07-27 13:28:08,550 Sleeping for 6s. Reason: RUNNING
2024-07-27 13:28:14,975 Sleeping for 6s. Reason: RUNNING
2024-07-27 13:28:24,476 Setting max_seq=508, max_extra_seq=2048
2024-07-27 13:31:20,563 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.3 pTM=0.339 ipTM=0.154
2024-07-27 13:31:32,013 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.9 pTM=0.34 ipTM=0.168 tol=8.05
2024-07-27 13:31:43,451 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.5 pTM=0.345 ipTM=0.245 tol=8.95
2024-07-27 13:31:54,917 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.4 pTM=0.346 ipTM=0.276 tol=7.66
2024-07-27 13:32:06,364 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.7 pTM=0.343 ipTM=0.235 tol=5.78
2024-07-27 13:32:17,850 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59 pTM=0.339 ipTM=0.19 tol=6.05
2024-07-27 13:32:29,344 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59 pTM=0.334 ipTM=0.158 tol=4.44
2024-07-27 13:32:40,790 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.332 ipTM=0.13 tol=4.66
2024-07-27 13:32:52,241 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.1 pTM=0.33 ipTM=0.127 tol=3.64
2024-07-27 13:33:03,716 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.2 pTM=0.331 ipTM=0.125 tol=2.39
2024-07-27 13:33:15,184 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.4 pTM=0.329 ipTM=0.127 tol=2.48
2024-07-27 13:33:26,646 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.333 ipTM=0.13 tol=3.22
2024-07-27 13:33:38,110 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.2 pTM=0.332 ipTM=0.126 tol=2.75
2024-07-27 13:33:49,609 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.5 pTM=0.33 ipTM=0.122 tol=2.25
2024-07-27 13:34:01,093 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59 pTM=0.328 ipTM=0.121 tol=5.09
2024-07-27 13:34:12,568 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.4 pTM=0.327 ipTM=0.119 tol=8.38
2024-07-27 13:34:24,039 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.5 pTM=0.329 ipTM=0.12 tol=3.57
2024-07-27 13:34:35,596 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.6 pTM=0.33 ipTM=0.124 tol=2.4
2024-07-27 13:34:47,102 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.4 pTM=0.331 ipTM=0.125 tol=2.37
2024-07-27 13:34:58,587 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.4 pTM=0.33 ipTM=0.128 tol=1.77
2024-07-27 13:35:10,070 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.1 pTM=0.329 ipTM=0.123 tol=2.37
2024-07-27 13:35:21,577 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.2 pTM=0.331 ipTM=0.121 tol=5.5
2024-07-27 13:35:33,065 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.1 pTM=0.329 ipTM=0.122 tol=5.86
2024-07-27 13:35:44,622 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.7 pTM=0.33 ipTM=0.128 tol=3.99
2024-07-27 13:35:56,115 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59 pTM=0.328 ipTM=0.124 tol=3.21
2024-07-27 13:36:07,613 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.4 pTM=0.329 ipTM=0.125 tol=3.31
2024-07-27 13:36:19,100 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.5 pTM=0.328 ipTM=0.121 tol=3.68
2024-07-27 13:36:30,612 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.9 pTM=0.326 ipTM=0.12 tol=3.34
2024-07-27 13:36:42,105 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.8 pTM=0.329 ipTM=0.122 tol=6.48
2024-07-27 13:36:53,598 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.8 pTM=0.328 ipTM=0.122 tol=7.37
2024-07-27 13:37:05,111 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59 pTM=0.328 ipTM=0.124 tol=5.83
2024-07-27 13:37:05,111 alphafold2_multimer_v3_model_1_seed_000 took 513.5s (30 recycles)
2024-07-27 13:37:16,993 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59 pTM=0.337 ipTM=0.12
2024-07-27 13:37:28,458 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61 pTM=0.354 ipTM=0.168 tol=10.2
2024-07-27 13:37:39,935 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.9 pTM=0.342 ipTM=0.151 tol=8.49
2024-07-27 13:37:51,454 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.2 pTM=0.34 ipTM=0.14 tol=4.24
2024-07-27 13:38:02,993 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60 pTM=0.341 ipTM=0.151 tol=3.22
2024-07-27 13:38:14,462 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.4 pTM=0.343 ipTM=0.149 tol=2.16
2024-07-27 13:38:25,939 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.2 pTM=0.343 ipTM=0.139 tol=2.24
2024-07-27 13:38:37,448 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.5 pTM=0.342 ipTM=0.146 tol=2.42
2024-07-27 13:38:48,938 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.8 pTM=0.343 ipTM=0.152 tol=1.16
2024-07-27 13:39:00,414 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.2 pTM=0.341 ipTM=0.143 tol=1.48
2024-07-27 13:39:11,898 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.2 pTM=0.34 ipTM=0.138 tol=1.49
2024-07-27 13:39:23,389 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.5 pTM=0.341 ipTM=0.147 tol=1.8
2024-07-27 13:39:34,879 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.1 pTM=0.34 ipTM=0.139 tol=3.17
2024-07-27 13:39:46,415 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.2 pTM=0.34 ipTM=0.143 tol=1.56
2024-07-27 13:39:57,914 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.7 pTM=0.339 ipTM=0.147 tol=2.29
2024-07-27 13:40:09,449 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.3 pTM=0.34 ipTM=0.147 tol=2.13
2024-07-27 13:40:20,969 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.1 pTM=0.339 ipTM=0.137 tol=1.37
2024-07-27 13:40:32,476 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.2 pTM=0.34 ipTM=0.149 tol=1.24
2024-07-27 13:40:43,980 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.5 pTM=0.34 ipTM=0.135 tol=1.59
2024-07-27 13:40:55,474 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.3 pTM=0.339 ipTM=0.135 tol=1.95
2024-07-27 13:41:06,969 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.1 pTM=0.341 ipTM=0.137 tol=3.57
2024-07-27 13:41:18,501 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.3 pTM=0.341 ipTM=0.149 tol=2.17
2024-07-27 13:41:30,047 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.5 pTM=0.34 ipTM=0.142 tol=3
2024-07-27 13:41:41,553 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.3 pTM=0.338 ipTM=0.133 tol=2.66
2024-07-27 13:41:53,047 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.1 pTM=0.338 ipTM=0.137 tol=1.67
2024-07-27 13:42:04,536 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.3 pTM=0.34 ipTM=0.141 tol=2.19
2024-07-27 13:42:16,035 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.4 pTM=0.34 ipTM=0.137 tol=1.49
2024-07-27 13:42:27,552 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60 pTM=0.339 ipTM=0.136 tol=1.45
2024-07-27 13:42:39,058 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.2 pTM=0.339 ipTM=0.138 tol=1.57
2024-07-27 13:42:50,532 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.6 pTM=0.337 ipTM=0.139 tol=1.8
2024-07-27 13:43:02,048 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.1 pTM=0.338 ipTM=0.134 tol=1.66
2024-07-27 13:43:02,049 alphafold2_multimer_v3_model_2_seed_000 took 356.5s (30 recycles)
2024-07-27 13:43:13,995 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.6 pTM=0.344 ipTM=0.171
2024-07-27 13:43:25,501 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.5 pTM=0.344 ipTM=0.155 tol=13
2024-07-27 13:43:37,017 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60 pTM=0.345 ipTM=0.184 tol=7.43
2024-07-27 13:43:48,564 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.2 pTM=0.344 ipTM=0.162 tol=3.11
2024-07-27 13:44:00,086 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.4 pTM=0.342 ipTM=0.151 tol=3.2
2024-07-27 13:44:11,591 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.4 pTM=0.347 ipTM=0.176 tol=2.64
2024-07-27 13:44:23,130 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.4 pTM=0.347 ipTM=0.164 tol=2.22
2024-07-27 13:44:34,681 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.5 pTM=0.345 ipTM=0.164 tol=3.59
2024-07-27 13:44:46,196 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.5 pTM=0.343 ipTM=0.157 tol=2.77
2024-07-27 13:44:57,709 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.4 pTM=0.343 ipTM=0.158 tol=2.51
2024-07-27 13:45:09,261 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.2 pTM=0.342 ipTM=0.154 tol=2.28
2024-07-27 13:45:20,827 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.8 pTM=0.348 ipTM=0.177 tol=1.38
2024-07-27 13:45:32,372 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.5 pTM=0.347 ipTM=0.157 tol=1.58
2024-07-27 13:45:43,917 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.8 pTM=0.348 ipTM=0.179 tol=3.12
2024-07-27 13:45:55,520 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.3 pTM=0.343 ipTM=0.15 tol=3.85
2024-07-27 13:46:07,046 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.9 pTM=0.348 ipTM=0.184 tol=1.78
2024-07-27 13:46:18,556 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.4 pTM=0.344 ipTM=0.155 tol=1.6
2024-07-27 13:46:30,096 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61 pTM=0.347 ipTM=0.191 tol=2.98
2024-07-27 13:46:41,643 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61 pTM=0.346 ipTM=0.156 tol=1.43
2024-07-27 13:46:53,162 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61 pTM=0.35 ipTM=0.179 tol=2.25
2024-07-27 13:47:04,669 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.6 pTM=0.346 ipTM=0.164 tol=1.88
2024-07-27 13:47:16,211 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.3 pTM=0.352 ipTM=0.184 tol=2.31
2024-07-27 13:47:27,764 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.7 pTM=0.347 ipTM=0.163 tol=2.18
2024-07-27 13:47:39,271 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.8 pTM=0.348 ipTM=0.169 tol=2.12
2024-07-27 13:47:50,779 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.8 pTM=0.346 ipTM=0.154 tol=1.12
2024-07-27 13:48:02,354 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.2 pTM=0.35 ipTM=0.176 tol=2.54
2024-07-27 13:48:13,905 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61 pTM=0.347 ipTM=0.15 tol=1.74
2024-07-27 13:48:25,413 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.6 pTM=0.346 ipTM=0.171 tol=1.93
2024-07-27 13:48:36,926 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.6 pTM=0.349 ipTM=0.172 tol=2.32
2024-07-27 13:48:48,449 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.7 pTM=0.35 ipTM=0.169 tol=1.43
2024-07-27 13:48:59,954 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.5 pTM=0.346 ipTM=0.145 tol=2.33
2024-07-27 13:48:59,955 alphafold2_multimer_v3_model_3_seed_000 took 357.5s (30 recycles)
2024-07-27 13:49:11,880 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.8 pTM=0.333 ipTM=0.142
2024-07-27 13:49:23,411 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.4 pTM=0.347 ipTM=0.233 tol=8.21
2024-07-27 13:49:34,921 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.9 pTM=0.348 ipTM=0.185 tol=11.5
2024-07-27 13:49:46,423 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.1 pTM=0.339 ipTM=0.14 tol=9.7
2024-07-27 13:49:57,937 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59 pTM=0.333 ipTM=0.12 tol=6.13
2024-07-27 13:50:09,449 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.1 pTM=0.34 ipTM=0.131 tol=4.52
2024-07-27 13:50:20,957 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.5 pTM=0.337 ipTM=0.125 tol=3.99
2024-07-27 13:50:32,465 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.2 pTM=0.338 ipTM=0.124 tol=3.83
2024-07-27 13:50:43,978 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.3 pTM=0.341 ipTM=0.132 tol=4.61
2024-07-27 13:50:55,487 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.7 pTM=0.337 ipTM=0.128 tol=6.47
2024-07-27 13:51:06,989 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.4 pTM=0.337 ipTM=0.128 tol=3.93
2024-07-27 13:51:18,507 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.7 pTM=0.339 ipTM=0.129 tol=3.07
2024-07-27 13:51:30,018 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.5 pTM=0.341 ipTM=0.132 tol=2.66
2024-07-27 13:51:41,559 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59 pTM=0.337 ipTM=0.13 tol=2.77
2024-07-27 13:51:53,082 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.6 pTM=0.337 ipTM=0.129 tol=2.53
2024-07-27 13:52:04,608 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.9 pTM=0.338 ipTM=0.127 tol=1.54
2024-07-27 13:52:16,135 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.3 pTM=0.337 ipTM=0.131 tol=1.5
2024-07-27 13:52:27,684 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.7 pTM=0.336 ipTM=0.124 tol=3.37
2024-07-27 13:52:39,223 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.5 pTM=0.336 ipTM=0.13 tol=1.86
2024-07-27 13:52:50,754 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.2 pTM=0.337 ipTM=0.13 tol=2.94
2024-07-27 13:53:02,284 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.7 pTM=0.337 ipTM=0.131 tol=2.28
2024-07-27 13:53:13,823 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.3 pTM=0.337 ipTM=0.127 tol=2.21
2024-07-27 13:53:25,353 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.2 pTM=0.339 ipTM=0.132 tol=3.46
2024-07-27 13:53:36,896 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.9 pTM=0.333 ipTM=0.124 tol=3.74
2024-07-27 13:53:48,421 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.8 pTM=0.336 ipTM=0.13 tol=4.93
2024-07-27 13:53:59,953 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.1 pTM=0.337 ipTM=0.13 tol=3.14
2024-07-27 13:54:11,491 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.7 pTM=0.342 ipTM=0.137 tol=2.37
2024-07-27 13:54:23,021 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.9 pTM=0.335 ipTM=0.127 tol=3.87
2024-07-27 13:54:34,544 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59 pTM=0.339 ipTM=0.136 tol=3.42
2024-07-27 13:54:46,077 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.9 pTM=0.335 ipTM=0.126 tol=2.78
2024-07-27 13:54:57,608 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59 pTM=0.34 ipTM=0.135 tol=2.87
2024-07-27 13:54:57,609 alphafold2_multimer_v3_model_4_seed_000 took 357.2s (30 recycles)
2024-07-27 13:55:09,530 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.2 pTM=0.332 ipTM=0.136
2024-07-27 13:55:21,061 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.2 pTM=0.335 ipTM=0.15 tol=10.1
2024-07-27 13:55:32,589 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.7 pTM=0.333 ipTM=0.115 tol=10.3
2024-07-27 13:55:44,120 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60 pTM=0.338 ipTM=0.124 tol=9.3
2024-07-27 13:55:55,662 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.6 pTM=0.337 ipTM=0.127 tol=5.77
2024-07-27 13:56:07,199 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.6 pTM=0.337 ipTM=0.132 tol=6.54
2024-07-27 13:56:18,725 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.2 pTM=0.334 ipTM=0.126 tol=7.11
2024-07-27 13:56:30,258 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60 pTM=0.335 ipTM=0.125 tol=4.08
2024-07-27 13:56:41,775 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.4 pTM=0.336 ipTM=0.13 tol=6.16
2024-07-27 13:56:53,288 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.6 pTM=0.336 ipTM=0.127 tol=6.18
2024-07-27 13:57:04,803 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.5 pTM=0.337 ipTM=0.128 tol=3.9
2024-07-27 13:57:16,326 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.6 pTM=0.339 ipTM=0.135 tol=6.62
2024-07-27 13:57:27,844 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.4 pTM=0.338 ipTM=0.131 tol=2.47
2024-07-27 13:57:39,359 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.4 pTM=0.338 ipTM=0.127 tol=5.02
2024-07-27 13:57:50,884 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.3 pTM=0.338 ipTM=0.128 tol=1.68
2024-07-27 13:58:02,399 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.3 pTM=0.34 ipTM=0.134 tol=6.05
2024-07-27 13:58:13,925 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.6 pTM=0.336 ipTM=0.127 tol=4.52
2024-07-27 13:58:25,451 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.8 pTM=0.336 ipTM=0.124 tol=5.05
2024-07-27 13:58:36,974 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.7 pTM=0.337 ipTM=0.127 tol=6.92
2024-07-27 13:58:48,499 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.5 pTM=0.338 ipTM=0.128 tol=4.6
2024-07-27 13:59:00,021 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.9 pTM=0.335 ipTM=0.128 tol=4.68
2024-07-27 13:59:11,557 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.3 pTM=0.337 ipTM=0.129 tol=1.98
2024-07-27 13:59:23,085 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.3 pTM=0.337 ipTM=0.131 tol=1.84
2024-07-27 13:59:34,602 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.9 pTM=0.336 ipTM=0.133 tol=4.34
2024-07-27 13:59:46,125 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.4 pTM=0.335 ipTM=0.127 tol=4.06
2024-07-27 13:59:57,651 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.5 pTM=0.337 ipTM=0.128 tol=5.99
2024-07-27 14:00:09,183 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.4 pTM=0.335 ipTM=0.13 tol=5.63
2024-07-27 14:00:20,697 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.7 pTM=0.333 ipTM=0.13 tol=2.41
2024-07-27 14:00:32,224 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.2 pTM=0.336 ipTM=0.127 tol=1.74
2024-07-27 14:00:43,752 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59 pTM=0.335 ipTM=0.128 tol=2.56
2024-07-27 14:00:55,273 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.9 pTM=0.335 ipTM=0.128 tol=2.66
2024-07-27 14:00:55,274 alphafold2_multimer_v3_model_5_seed_000 took 357.3s (30 recycles)
2024-07-27 14:00:55,678 reranking models by 'multimer' metric
2024-07-27 14:00:59,027 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 14:01:52,065 Relaxation took 56.4s
2024-07-27 14:01:52,065 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.5 pTM=0.346 ipTM=0.145
2024-07-27 14:03:06,895 Relaxation took 74.8s
2024-07-27 14:03:06,895 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59 pTM=0.34 ipTM=0.135
2024-07-27 14:03:52,379 Relaxation took 45.5s
2024-07-27 14:03:52,379 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.1 pTM=0.338 ipTM=0.134
2024-07-27 14:04:37,204 Relaxation took 44.8s
2024-07-27 14:04:37,204 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.9 pTM=0.335 ipTM=0.128
2024-07-27 14:05:36,797 Relaxation took 59.6s
2024-07-27 14:05:36,797 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59 pTM=0.328 ipTM=0.124
2024-07-27 14:05:38,548 Done