2024-07-27 13:41:22,730 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 13:41:23,058 Running on GPU
2024-07-27 13:41:26,437 Found 6 citations for tools or databases
2024-07-27 13:41:26,437 Query 1/1: SOX9_FBXL22 (length 756)
2024-07-27 13:41:26,940 Sleeping for 6s. Reason: PENDING
2024-07-27 13:41:33,361 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:41:40,817 Sleeping for 10s. Reason: RUNNING
2024-07-27 13:41:51,237 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:42:00,652 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:42:08,075 Sleeping for 6s. Reason: RUNNING
2024-07-27 13:42:14,509 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:42:21,952 Sleeping for 5s. Reason: RUNNING
2024-07-27 13:42:27,359 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:42:38,450 Sleeping for 8s. Reason: PENDING
2024-07-27 13:42:46,888 Sleeping for 10s. Reason: RUNNING
2024-07-27 13:42:57,312 Sleeping for 9s. Reason: RUNNING
2024-07-27 13:43:06,735 Sleeping for 7s. Reason: RUNNING
2024-07-27 13:43:16,497 Setting max_seq=508, max_extra_seq=2048
2024-07-27 13:45:57,243 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=35.4 pTM=0.228 ipTM=0.237
2024-07-27 13:46:08,658 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=33.3 pTM=0.223 ipTM=0.182 tol=15.7
2024-07-27 13:46:20,074 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=33 pTM=0.225 ipTM=0.198 tol=7.34
2024-07-27 13:46:31,518 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=33.6 pTM=0.225 ipTM=0.152 tol=6.5
2024-07-27 13:46:42,983 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.3 pTM=0.23 ipTM=0.139 tol=8.58
2024-07-27 13:46:54,461 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=34.5 pTM=0.238 ipTM=0.145 tol=6.66
2024-07-27 13:47:05,942 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=34.9 pTM=0.247 ipTM=0.148 tol=4.77
2024-07-27 13:47:17,428 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=35.2 pTM=0.244 ipTM=0.149 tol=4.46
2024-07-27 13:47:28,929 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=35 pTM=0.246 ipTM=0.148 tol=3.76
2024-07-27 13:47:40,443 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=35.4 pTM=0.248 ipTM=0.151 tol=4.29
2024-07-27 13:47:51,961 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=35.2 pTM=0.25 ipTM=0.148 tol=3.46
2024-07-27 13:48:03,498 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=35.4 pTM=0.254 ipTM=0.154 tol=4.89
2024-07-27 13:48:15,040 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=35.1 pTM=0.249 ipTM=0.146 tol=4.86
2024-07-27 13:48:26,568 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=35.1 pTM=0.248 ipTM=0.149 tol=2.38
2024-07-27 13:48:38,104 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=35.2 pTM=0.247 ipTM=0.148 tol=2.4
2024-07-27 13:48:49,655 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=35.6 pTM=0.247 ipTM=0.146 tol=3
2024-07-27 13:49:01,197 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=35.2 pTM=0.249 ipTM=0.147 tol=3.19
2024-07-27 13:49:12,740 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=35.3 pTM=0.247 ipTM=0.148 tol=3.09
2024-07-27 13:49:24,295 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=35.2 pTM=0.247 ipTM=0.145 tol=2.93
2024-07-27 13:49:35,846 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=35.3 pTM=0.245 ipTM=0.149 tol=2.64
2024-07-27 13:49:47,406 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=35.3 pTM=0.245 ipTM=0.149 tol=3.31
2024-07-27 13:49:58,965 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=35.7 pTM=0.247 ipTM=0.148 tol=4.17
2024-07-27 13:50:10,534 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=35.2 pTM=0.248 ipTM=0.145 tol=3.49
2024-07-27 13:50:22,098 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=35.3 pTM=0.247 ipTM=0.149 tol=2.76
2024-07-27 13:50:33,668 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=35.5 pTM=0.249 ipTM=0.143 tol=3.3
2024-07-27 13:50:45,229 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=35.6 pTM=0.247 ipTM=0.147 tol=3.55
2024-07-27 13:50:56,797 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=35.6 pTM=0.247 ipTM=0.144 tol=2.74
2024-07-27 13:51:08,374 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=35.5 pTM=0.247 ipTM=0.147 tol=3.35
2024-07-27 13:51:19,933 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=35.1 pTM=0.247 ipTM=0.145 tol=2.19
2024-07-27 13:51:31,491 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=35.3 pTM=0.245 ipTM=0.145 tol=3.04
2024-07-27 13:51:43,062 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=35.4 pTM=0.246 ipTM=0.144 tol=1.84
2024-07-27 13:51:43,062 alphafold2_multimer_v3_model_1_seed_000 took 501.9s (30 recycles)
2024-07-27 13:51:54,962 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=35.9 pTM=0.25 ipTM=0.283
2024-07-27 13:52:06,509 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=35.2 pTM=0.249 ipTM=0.189 tol=11.9
2024-07-27 13:52:18,062 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=36.6 pTM=0.248 ipTM=0.158 tol=8.84
2024-07-27 13:52:29,629 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=36.1 pTM=0.246 ipTM=0.146 tol=5.14
2024-07-27 13:52:41,203 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=36.5 pTM=0.246 ipTM=0.144 tol=4.75
2024-07-27 13:52:52,769 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=36.5 pTM=0.245 ipTM=0.141 tol=3.86
2024-07-27 13:53:04,349 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=36.4 pTM=0.243 ipTM=0.139 tol=2.62
2024-07-27 13:53:15,915 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=36.8 pTM=0.242 ipTM=0.137 tol=2.73
2024-07-27 13:53:27,479 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=36.2 pTM=0.24 ipTM=0.129 tol=4.27
2024-07-27 13:53:39,054 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=36.5 pTM=0.243 ipTM=0.14 tol=5.23
2024-07-27 13:53:50,631 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=36.2 pTM=0.241 ipTM=0.134 tol=3.81
2024-07-27 13:54:02,215 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=36.4 pTM=0.244 ipTM=0.139 tol=6.09
2024-07-27 13:54:13,788 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=36.3 pTM=0.24 ipTM=0.134 tol=5.44
2024-07-27 13:54:25,360 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=36.4 pTM=0.241 ipTM=0.141 tol=3.03
2024-07-27 13:54:36,937 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=36.1 pTM=0.238 ipTM=0.129 tol=3.51
2024-07-27 13:54:48,548 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=36.6 pTM=0.241 ipTM=0.131 tol=3.99
2024-07-27 13:55:00,135 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=36.1 pTM=0.239 ipTM=0.128 tol=5.27
2024-07-27 13:55:11,718 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=36.1 pTM=0.239 ipTM=0.128 tol=5.23
2024-07-27 13:55:23,287 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=36 pTM=0.24 ipTM=0.13 tol=2.89
2024-07-27 13:55:34,864 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=36.2 pTM=0.24 ipTM=0.128 tol=4.05
2024-07-27 13:55:46,458 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=36.1 pTM=0.239 ipTM=0.131 tol=2.34
2024-07-27 13:55:58,026 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=36.2 pTM=0.239 ipTM=0.129 tol=3.62
2024-07-27 13:56:09,604 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=35.9 pTM=0.239 ipTM=0.128 tol=3.01
2024-07-27 13:56:21,177 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=36.1 pTM=0.239 ipTM=0.129 tol=4.23
2024-07-27 13:56:32,761 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=36 pTM=0.238 ipTM=0.128 tol=3.81
2024-07-27 13:56:44,348 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=36.3 pTM=0.24 ipTM=0.133 tol=3.41
2024-07-27 13:56:55,942 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=36.6 pTM=0.239 ipTM=0.134 tol=5.03
2024-07-27 13:57:07,535 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=36.2 pTM=0.239 ipTM=0.13 tol=6.83
2024-07-27 13:57:19,131 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=36.2 pTM=0.24 ipTM=0.128 tol=7.34
2024-07-27 13:57:30,719 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=36.4 pTM=0.243 ipTM=0.135 tol=3.98
2024-07-27 13:57:42,314 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=36.5 pTM=0.24 ipTM=0.126 tol=3.87
2024-07-27 13:57:42,314 alphafold2_multimer_v3_model_2_seed_000 took 358.9s (30 recycles)
2024-07-27 13:57:54,333 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.8 pTM=0.223 ipTM=0.179
2024-07-27 13:58:05,993 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=35.7 pTM=0.248 ipTM=0.262 tol=15.4
2024-07-27 13:58:17,638 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=35.8 pTM=0.255 ipTM=0.213 tol=12.9
2024-07-27 13:58:29,313 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=35.1 pTM=0.242 ipTM=0.199 tol=9.75
2024-07-27 13:58:40,968 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=35.8 pTM=0.25 ipTM=0.17 tol=8.2
2024-07-27 13:58:52,638 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=35.9 pTM=0.25 ipTM=0.173 tol=7.05
2024-07-27 13:59:04,299 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=35.8 pTM=0.248 ipTM=0.156 tol=10.7
2024-07-27 13:59:15,949 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=35.8 pTM=0.252 ipTM=0.151 tol=5.87
2024-07-27 13:59:27,606 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=36 pTM=0.262 ipTM=0.15 tol=6.11
2024-07-27 13:59:39,267 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=37 pTM=0.274 ipTM=0.182 tol=6.49
2024-07-27 13:59:50,927 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=36.7 pTM=0.267 ipTM=0.148 tol=5.26
2024-07-27 14:00:02,594 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=37.5 pTM=0.273 ipTM=0.175 tol=5.41
2024-07-27 14:00:14,271 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=37.1 pTM=0.269 ipTM=0.163 tol=5.65
2024-07-27 14:00:25,950 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=37.5 pTM=0.273 ipTM=0.182 tol=5.4
2024-07-27 14:00:37,631 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=37.1 pTM=0.268 ipTM=0.157 tol=4.46
2024-07-27 14:00:49,316 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=37.6 pTM=0.272 ipTM=0.176 tol=4.71
2024-07-27 14:01:00,981 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=37.2 pTM=0.269 ipTM=0.16 tol=3.6
2024-07-27 14:01:12,658 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=37.3 pTM=0.271 ipTM=0.166 tol=4.68
2024-07-27 14:01:24,323 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=37.1 pTM=0.268 ipTM=0.154 tol=8.15
2024-07-27 14:01:35,978 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=37 pTM=0.269 ipTM=0.152 tol=7.17
2024-07-27 14:01:47,652 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=37.2 pTM=0.268 ipTM=0.149 tol=3.68
2024-07-27 14:01:59,335 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=37.2 pTM=0.27 ipTM=0.161 tol=8.43
2024-07-27 14:02:11,011 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=36.9 pTM=0.27 ipTM=0.153 tol=3.1
2024-07-27 14:02:22,692 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=37.1 pTM=0.27 ipTM=0.164 tol=4
2024-07-27 14:02:34,378 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=37.2 pTM=0.268 ipTM=0.15 tol=7.46
2024-07-27 14:02:46,067 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=37.2 pTM=0.271 ipTM=0.172 tol=9.28
2024-07-27 14:02:57,754 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=37.2 pTM=0.267 ipTM=0.147 tol=4.06
2024-07-27 14:03:09,434 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=37.2 pTM=0.271 ipTM=0.165 tol=7.86
2024-07-27 14:03:21,118 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=37 pTM=0.269 ipTM=0.143 tol=8.48
2024-07-27 14:03:32,807 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=37 pTM=0.268 ipTM=0.145 tol=8.03
2024-07-27 14:03:44,505 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=37.2 pTM=0.27 ipTM=0.157 tol=2.55
2024-07-27 14:03:44,505 alphafold2_multimer_v3_model_3_seed_000 took 361.8s (30 recycles)
2024-07-27 14:03:56,480 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=34.8 pTM=0.26 ipTM=0.14
2024-07-27 14:04:08,105 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=35.9 pTM=0.26 ipTM=0.155 tol=17.2
2024-07-27 14:04:19,734 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36.3 pTM=0.261 ipTM=0.163 tol=13.6
2024-07-27 14:04:31,367 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=35.6 pTM=0.251 ipTM=0.153 tol=11.3
2024-07-27 14:04:43,006 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=37.4 pTM=0.264 ipTM=0.151 tol=6.57
2024-07-27 14:04:54,635 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=37.3 pTM=0.268 ipTM=0.153 tol=7.46
2024-07-27 14:05:06,257 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=37.8 pTM=0.274 ipTM=0.154 tol=4.06
2024-07-27 14:05:17,875 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=37.7 pTM=0.277 ipTM=0.155 tol=4.5
2024-07-27 14:05:29,514 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=37.7 pTM=0.276 ipTM=0.151 tol=4.84
2024-07-27 14:05:41,183 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=37.7 pTM=0.278 ipTM=0.155 tol=9.98
2024-07-27 14:05:52,831 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38 pTM=0.273 ipTM=0.147 tol=7.96
2024-07-27 14:06:04,440 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.2 pTM=0.279 ipTM=0.15 tol=6.43
2024-07-27 14:06:16,048 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=37.7 pTM=0.272 ipTM=0.146 tol=5.74
2024-07-27 14:06:27,654 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=37.6 pTM=0.273 ipTM=0.151 tol=3.65
2024-07-27 14:06:39,270 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=37.7 pTM=0.272 ipTM=0.147 tol=4.87
2024-07-27 14:06:50,899 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=38 pTM=0.276 ipTM=0.15 tol=5.78
2024-07-27 14:07:02,526 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=37.8 pTM=0.273 ipTM=0.146 tol=6.2
2024-07-27 14:07:14,174 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=37.7 pTM=0.273 ipTM=0.146 tol=6.16
2024-07-27 14:07:25,798 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=37.8 pTM=0.274 ipTM=0.149 tol=6.57
2024-07-27 14:07:37,418 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=37.8 pTM=0.275 ipTM=0.147 tol=5.94
2024-07-27 14:07:49,024 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=37.9 pTM=0.274 ipTM=0.148 tol=5.45
2024-07-27 14:08:00,641 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=37.6 pTM=0.274 ipTM=0.145 tol=6.88
2024-07-27 14:08:12,271 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=37.5 pTM=0.274 ipTM=0.144 tol=8.36
2024-07-27 14:08:23,895 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=37.7 pTM=0.274 ipTM=0.14 tol=4.84
2024-07-27 14:08:35,541 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=37.6 pTM=0.271 ipTM=0.138 tol=6.36
2024-07-27 14:08:47,173 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=37.6 pTM=0.275 ipTM=0.14 tol=5.37
2024-07-27 14:08:58,804 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=37.7 pTM=0.271 ipTM=0.14 tol=4.79
2024-07-27 14:09:10,450 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=37.7 pTM=0.273 ipTM=0.146 tol=6.2
2024-07-27 14:09:22,070 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=37.4 pTM=0.272 ipTM=0.144 tol=9.56
2024-07-27 14:09:33,684 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=37.8 pTM=0.275 ipTM=0.148 tol=5.69
2024-07-27 14:09:45,290 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=37.7 pTM=0.272 ipTM=0.147 tol=6.12
2024-07-27 14:09:45,290 alphafold2_multimer_v3_model_4_seed_000 took 360.4s (30 recycles)
2024-07-27 14:09:57,352 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=34.8 pTM=0.227 ipTM=0.122
2024-07-27 14:10:09,041 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=36.3 pTM=0.24 ipTM=0.129 tol=16.2
2024-07-27 14:10:20,719 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=36.7 pTM=0.243 ipTM=0.129 tol=9.68
2024-07-27 14:10:32,376 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=37.5 pTM=0.263 ipTM=0.134 tol=14.2
2024-07-27 14:10:44,024 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=37.8 pTM=0.269 ipTM=0.138 tol=10.1
2024-07-27 14:10:55,680 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=38.1 pTM=0.272 ipTM=0.138 tol=10.1
2024-07-27 14:11:07,330 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=38.2 pTM=0.27 ipTM=0.142 tol=4.56
2024-07-27 14:11:18,980 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=38.9 pTM=0.273 ipTM=0.143 tol=5.88
2024-07-27 14:11:30,651 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=38.5 pTM=0.269 ipTM=0.141 tol=4.66
2024-07-27 14:11:42,316 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=38.9 pTM=0.272 ipTM=0.143 tol=6.79
2024-07-27 14:11:53,993 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=38.5 pTM=0.27 ipTM=0.14 tol=4.49
2024-07-27 14:12:05,664 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=39.1 pTM=0.271 ipTM=0.142 tol=4.48
2024-07-27 14:12:17,330 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=38.6 pTM=0.27 ipTM=0.143 tol=3.38
2024-07-27 14:12:29,006 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=38.8 pTM=0.271 ipTM=0.142 tol=5.87
2024-07-27 14:12:40,679 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=38.5 pTM=0.269 ipTM=0.142 tol=5.55
2024-07-27 14:12:52,371 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=38.8 pTM=0.27 ipTM=0.139 tol=5.14
2024-07-27 14:13:04,061 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=38.6 pTM=0.268 ipTM=0.142 tol=4.23
2024-07-27 14:13:15,719 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=38.7 pTM=0.269 ipTM=0.141 tol=2.88
2024-07-27 14:13:27,388 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=38.6 pTM=0.27 ipTM=0.144 tol=2.33
2024-07-27 14:13:39,059 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=38.6 pTM=0.269 ipTM=0.144 tol=3.07
2024-07-27 14:13:50,740 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=38.5 pTM=0.267 ipTM=0.141 tol=4.04
2024-07-27 14:14:02,415 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=38.7 pTM=0.27 ipTM=0.142 tol=4.43
2024-07-27 14:14:14,094 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=38.2 pTM=0.27 ipTM=0.14 tol=2.3
2024-07-27 14:14:25,758 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=38.7 pTM=0.271 ipTM=0.144 tol=3.43
2024-07-27 14:14:37,424 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=38.3 pTM=0.27 ipTM=0.144 tol=3.09
2024-07-27 14:14:49,096 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=38.8 pTM=0.271 ipTM=0.143 tol=3.06
2024-07-27 14:15:00,757 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=38.5 pTM=0.268 ipTM=0.144 tol=3.45
2024-07-27 14:15:12,426 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=38.8 pTM=0.271 ipTM=0.141 tol=3.2
2024-07-27 14:15:24,093 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=38.5 pTM=0.268 ipTM=0.14 tol=4.2
2024-07-27 14:15:35,753 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=38.6 pTM=0.268 ipTM=0.139 tol=2.86
2024-07-27 14:15:47,415 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=38.5 pTM=0.269 ipTM=0.139 tol=4.67
2024-07-27 14:15:47,416 alphafold2_multimer_v3_model_5_seed_000 took 361.8s (30 recycles)
2024-07-27 14:15:47,788 reranking models by 'multimer' metric
2024-07-27 14:15:49,771 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 14:16:57,597 Relaxation took 69.8s
2024-07-27 14:16:57,597 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=37.2 pTM=0.27 ipTM=0.157
2024-07-27 14:18:08,095 Relaxation took 70.5s
2024-07-27 14:18:08,095 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=37.7 pTM=0.272 ipTM=0.147
2024-07-27 14:19:05,340 Relaxation took 57.2s
2024-07-27 14:19:05,340 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=38.5 pTM=0.269 ipTM=0.139
2024-07-27 14:19:57,272 Relaxation took 51.9s
2024-07-27 14:19:57,272 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=35.4 pTM=0.246 ipTM=0.144
2024-07-27 14:21:07,169 Relaxation took 69.9s
2024-07-27 14:21:07,170 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=36.5 pTM=0.24 ipTM=0.126
2024-07-27 14:21:08,530 Done