2024-07-27 14:48:18,289 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 14:48:18,607 Running on GPU 2024-07-27 14:48:22,209 Found 6 citations for tools or databases 2024-07-27 14:48:22,209 Query 1/1: TAF7_CCNF (length 1135) 2024-07-27 14:48:22,703 Sleeping for 5s. Reason: PENDING 2024-07-27 14:48:28,148 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:48:37,568 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:48:47,002 Sleeping for 5s. Reason: RUNNING 2024-07-27 14:48:52,423 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:49:01,879 Sleeping for 7s. Reason: RUNNING 2024-07-27 14:49:09,310 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:49:18,739 Sleeping for 6s. Reason: RUNNING 2024-07-27 14:49:25,165 Sleeping for 5s. Reason: RUNNING 2024-07-27 14:49:30,579 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:49:40,017 Sleeping for 7s. Reason: RUNNING 2024-07-27 14:49:47,445 Sleeping for 6s. Reason: RUNNING 2024-07-27 14:49:53,868 Sleeping for 10s. Reason: RUNNING 2024-07-27 14:50:05,975 Sleeping for 7s. Reason: PENDING 2024-07-27 14:50:13,417 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:50:22,837 Sleeping for 10s. Reason: RUNNING 2024-07-27 14:50:33,247 Sleeping for 9s. Reason: RUNNING 2024-07-27 14:50:42,678 Sleeping for 6s. Reason: RUNNING 2024-07-27 14:50:49,112 Sleeping for 6s. Reason: RUNNING 2024-07-27 14:50:55,534 Sleeping for 8s. Reason: RUNNING 2024-07-27 14:51:06,597 Setting max_seq=508, max_extra_seq=2048 2024-07-27 14:54:39,434 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.515 ipTM=0.161 2024-07-27 14:55:08,757 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.4 pTM=0.52 ipTM=0.18 tol=9.13 2024-07-27 14:55:38,246 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.6 pTM=0.517 ipTM=0.186 tol=7.83 2024-07-27 14:56:07,811 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.3 pTM=0.521 ipTM=0.192 tol=3.5 2024-07-27 14:56:37,458 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.5 pTM=0.521 ipTM=0.194 tol=3.62 2024-07-27 14:57:07,172 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.7 pTM=0.529 ipTM=0.414 tol=4.74 2024-07-27 14:57:36,917 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.9 pTM=0.521 ipTM=0.301 tol=3.68 2024-07-27 14:58:06,658 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.523 ipTM=0.216 tol=3.26 2024-07-27 14:58:36,447 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.6 pTM=0.529 ipTM=0.414 tol=3.22 2024-07-27 14:59:06,219 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.2 pTM=0.522 ipTM=0.292 tol=3.04 2024-07-27 14:59:35,995 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.1 pTM=0.522 ipTM=0.224 tol=2.54 2024-07-27 15:00:05,779 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.3 pTM=0.525 ipTM=0.326 tol=3.01 2024-07-27 15:00:35,555 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.524 ipTM=0.275 tol=3.36 2024-07-27 15:01:05,342 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.9 pTM=0.524 ipTM=0.257 tol=3.99 2024-07-27 15:01:35,084 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.526 ipTM=0.335 tol=2.66 2024-07-27 15:02:04,859 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.4 pTM=0.525 ipTM=0.3 tol=3.23 2024-07-27 15:02:34,623 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60 pTM=0.523 ipTM=0.298 tol=3.43 2024-07-27 15:03:04,404 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.1 pTM=0.525 ipTM=0.306 tol=3.7 2024-07-27 15:03:34,189 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.2 pTM=0.527 ipTM=0.371 tol=2.79 2024-07-27 15:04:03,966 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.525 ipTM=0.321 tol=2.65 2024-07-27 15:04:33,736 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60 pTM=0.528 ipTM=0.386 tol=4.3 2024-07-27 15:05:03,491 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.1 pTM=0.523 ipTM=0.315 tol=3.66 2024-07-27 15:05:33,277 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.1 pTM=0.528 ipTM=0.381 tol=2.77 2024-07-27 15:06:03,038 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.3 pTM=0.526 ipTM=0.351 tol=3.94 2024-07-27 15:06:32,795 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.2 pTM=0.53 ipTM=0.378 tol=3.56 2024-07-27 15:07:02,574 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.1 pTM=0.527 ipTM=0.324 tol=2.5 2024-07-27 15:07:32,308 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.531 ipTM=0.377 tol=1.21 2024-07-27 15:08:02,073 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60 pTM=0.527 ipTM=0.336 tol=2.18 2024-07-27 15:08:31,852 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.8 pTM=0.526 ipTM=0.293 tol=4.13 2024-07-27 15:09:01,663 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.1 pTM=0.527 ipTM=0.339 tol=2.05 2024-07-27 15:09:31,474 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.1 pTM=0.529 ipTM=0.336 tol=4.39 2024-07-27 15:09:31,475 alphafold2_multimer_v3_model_1_seed_000 took 1100.0s (30 recycles) 2024-07-27 15:10:02,100 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.6 pTM=0.517 ipTM=0.169 2024-07-27 15:10:31,961 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.6 pTM=0.516 ipTM=0.237 tol=9.06 2024-07-27 15:11:01,901 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.7 pTM=0.514 ipTM=0.191 tol=6.16 2024-07-27 15:11:31,799 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.9 pTM=0.517 ipTM=0.194 tol=4.65 2024-07-27 15:12:01,670 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.5 pTM=0.52 ipTM=0.227 tol=5.53 2024-07-27 15:12:31,523 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.6 pTM=0.519 ipTM=0.2 tol=6.52 2024-07-27 15:13:01,387 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.6 pTM=0.518 ipTM=0.197 tol=3.57 2024-07-27 15:13:31,241 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.8 pTM=0.521 ipTM=0.209 tol=2.74 2024-07-27 15:14:01,133 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.9 pTM=0.523 ipTM=0.24 tol=2.72 2024-07-27 15:14:31,021 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.7 pTM=0.532 ipTM=0.387 tol=4.68 2024-07-27 15:15:00,870 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.7 pTM=0.53 ipTM=0.366 tol=7.35 2024-07-27 15:15:30,679 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62 pTM=0.534 ipTM=0.408 tol=3.24 2024-07-27 15:16:00,507 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.9 pTM=0.534 ipTM=0.408 tol=2.55 2024-07-27 15:16:30,332 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.3 pTM=0.539 ipTM=0.455 tol=3.72 2024-07-27 15:17:00,171 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.2 pTM=0.537 ipTM=0.438 tol=3.01 2024-07-27 15:17:29,993 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.5 pTM=0.542 ipTM=0.454 tol=3.98 2024-07-27 15:17:59,818 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.5 pTM=0.541 ipTM=0.449 tol=2.35 2024-07-27 15:18:29,657 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.6 pTM=0.542 ipTM=0.457 tol=1.54 2024-07-27 15:18:59,495 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.6 pTM=0.542 ipTM=0.468 tol=3.15 2024-07-27 15:19:29,305 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.5 pTM=0.541 ipTM=0.458 tol=3.39 2024-07-27 15:19:59,127 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.4 pTM=0.541 ipTM=0.457 tol=1.34 2024-07-27 15:20:28,901 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.6 pTM=0.541 ipTM=0.465 tol=1.12 2024-07-27 15:20:58,712 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.5 pTM=0.539 ipTM=0.455 tol=1.23 2024-07-27 15:21:28,519 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.542 ipTM=0.467 tol=0.78 2024-07-27 15:21:58,341 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.6 pTM=0.542 ipTM=0.463 tol=3.6 2024-07-27 15:22:28,171 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.6 pTM=0.542 ipTM=0.476 tol=3.38 2024-07-27 15:22:57,980 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.6 pTM=0.542 ipTM=0.469 tol=1.09 2024-07-27 15:23:27,771 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.6 pTM=0.542 ipTM=0.462 tol=1.15 2024-07-27 15:23:57,561 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.7 pTM=0.542 ipTM=0.458 tol=1.26 2024-07-27 15:24:27,353 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.7 pTM=0.542 ipTM=0.465 tol=1.43 2024-07-27 15:24:57,128 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.5 pTM=0.54 ipTM=0.453 tol=1.15 2024-07-27 15:24:57,129 alphafold2_multimer_v3_model_2_seed_000 took 924.9s (30 recycles) 2024-07-27 15:25:27,701 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.4 pTM=0.527 ipTM=0.212 2024-07-27 15:25:57,510 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.8 pTM=0.523 ipTM=0.346 tol=14.4 2024-07-27 15:26:27,342 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.7 pTM=0.511 ipTM=0.166 tol=8.95 2024-07-27 15:26:57,176 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.4 pTM=0.516 ipTM=0.181 tol=4.65 2024-07-27 15:27:27,023 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.9 pTM=0.522 ipTM=0.383 tol=7.36 2024-07-27 15:27:56,886 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.8 pTM=0.516 ipTM=0.182 tol=4.48 2024-07-27 15:28:26,722 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.8 pTM=0.518 ipTM=0.187 tol=4.8 2024-07-27 15:28:56,573 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.1 pTM=0.516 ipTM=0.188 tol=4.22 2024-07-27 15:29:26,411 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60 pTM=0.517 ipTM=0.186 tol=5.01 2024-07-27 15:29:56,278 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.9 pTM=0.514 ipTM=0.18 tol=4.2 2024-07-27 15:30:26,188 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.9 pTM=0.511 ipTM=0.171 tol=2.88 2024-07-27 15:30:56,046 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.8 pTM=0.514 ipTM=0.179 tol=2.79 2024-07-27 15:31:25,936 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.1 pTM=0.518 ipTM=0.195 tol=3.02 2024-07-27 15:31:55,829 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.8 pTM=0.514 ipTM=0.179 tol=2.43 2024-07-27 15:32:25,672 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.7 pTM=0.509 ipTM=0.167 tol=2.45 2024-07-27 15:32:55,470 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.9 pTM=0.514 ipTM=0.176 tol=2.87 2024-07-27 15:33:25,253 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.8 pTM=0.511 ipTM=0.17 tol=2.72 2024-07-27 15:33:55,033 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.8 pTM=0.512 ipTM=0.17 tol=4.96 2024-07-27 15:34:24,812 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.8 pTM=0.511 ipTM=0.17 tol=2.24 2024-07-27 15:34:54,612 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.7 pTM=0.511 ipTM=0.17 tol=3.2 2024-07-27 15:35:24,437 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.5 pTM=0.511 ipTM=0.17 tol=2.37 2024-07-27 15:35:54,246 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.7 pTM=0.511 ipTM=0.172 tol=2.62 2024-07-27 15:36:24,068 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.5 pTM=0.51 ipTM=0.169 tol=2.37 2024-07-27 15:36:53,911 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.5 pTM=0.511 ipTM=0.172 tol=2.64 2024-07-27 15:37:23,752 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.4 pTM=0.512 ipTM=0.174 tol=2.52 2024-07-27 15:37:53,603 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.2 pTM=0.512 ipTM=0.178 tol=2.5 2024-07-27 15:38:23,460 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.5 pTM=0.513 ipTM=0.175 tol=2.87 2024-07-27 15:38:53,285 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.4 pTM=0.513 ipTM=0.177 tol=2.07 2024-07-27 15:39:23,105 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.4 pTM=0.511 ipTM=0.172 tol=1.99 2024-07-27 15:39:52,936 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.4 pTM=0.512 ipTM=0.173 tol=1.7 2024-07-27 15:40:22,760 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.3 pTM=0.511 ipTM=0.171 tol=1.38 2024-07-27 15:40:22,761 alphafold2_multimer_v3_model_3_seed_000 took 924.8s (30 recycles) 2024-07-27 15:40:53,295 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.6 pTM=0.521 ipTM=0.263 2024-07-27 15:41:23,122 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59 pTM=0.521 ipTM=0.182 tol=8.52 2024-07-27 15:41:52,990 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59 pTM=0.516 ipTM=0.177 tol=5.32 2024-07-27 15:42:22,850 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.1 pTM=0.519 ipTM=0.179 tol=3.74 2024-07-27 15:42:52,704 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.4 pTM=0.519 ipTM=0.182 tol=3.74 2024-07-27 15:43:22,555 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.5 pTM=0.519 ipTM=0.182 tol=4.02 2024-07-27 15:43:52,416 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.5 pTM=0.519 ipTM=0.18 tol=3.02 2024-07-27 15:44:22,287 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.7 pTM=0.519 ipTM=0.187 tol=4.11 2024-07-27 15:44:52,144 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.7 pTM=0.523 ipTM=0.204 tol=4.1 2024-07-27 15:45:21,990 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60 pTM=0.522 ipTM=0.2 tol=4.04 2024-07-27 15:45:51,863 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.9 pTM=0.522 ipTM=0.198 tol=3.11 2024-07-27 15:46:21,701 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.522 ipTM=0.199 tol=5.75 2024-07-27 15:46:51,550 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.9 pTM=0.523 ipTM=0.203 tol=5.71 2024-07-27 15:47:21,360 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60 pTM=0.525 ipTM=0.245 tol=5.34 2024-07-27 15:47:51,162 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60 pTM=0.524 ipTM=0.263 tol=4.62 2024-07-27 15:48:20,970 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.2 pTM=0.526 ipTM=0.237 tol=2.99 2024-07-27 15:48:50,805 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.8 pTM=0.523 ipTM=0.207 tol=2.81 2024-07-27 15:49:20,691 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.8 pTM=0.524 ipTM=0.209 tol=2.84 2024-07-27 15:49:50,586 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.8 pTM=0.521 ipTM=0.199 tol=2.53 2024-07-27 15:50:20,496 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.5 pTM=0.52 ipTM=0.195 tol=3.57 2024-07-27 15:50:50,429 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.7 pTM=0.521 ipTM=0.198 tol=5.1 2024-07-27 15:51:20,356 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.6 pTM=0.52 ipTM=0.196 tol=5.2 2024-07-27 15:51:50,281 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.7 pTM=0.522 ipTM=0.216 tol=3.99 2024-07-27 15:52:20,188 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60 pTM=0.522 ipTM=0.217 tol=3.53 2024-07-27 15:52:50,080 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.9 pTM=0.525 ipTM=0.259 tol=2.31 2024-07-27 15:53:19,945 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60 pTM=0.526 ipTM=0.277 tol=3.29 2024-07-27 15:53:49,836 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.9 pTM=0.525 ipTM=0.231 tol=3.74 2024-07-27 15:54:19,693 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.8 pTM=0.527 ipTM=0.281 tol=4.36 2024-07-27 15:54:49,581 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.8 pTM=0.525 ipTM=0.237 tol=3.6 2024-07-27 15:55:19,492 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.9 pTM=0.524 ipTM=0.214 tol=3.2 2024-07-27 15:55:49,378 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.7 pTM=0.522 ipTM=0.203 tol=5.71 2024-07-27 15:55:49,379 alphafold2_multimer_v3_model_4_seed_000 took 925.8s (30 recycles) 2024-07-27 15:56:20,062 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.5 pTM=0.514 ipTM=0.182 2024-07-27 15:56:49,978 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.8 pTM=0.531 ipTM=0.462 tol=13.7 2024-07-27 15:57:19,914 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.522 ipTM=0.233 tol=10.5 2024-07-27 15:57:49,914 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.2 pTM=0.525 ipTM=0.364 tol=6.17 2024-07-27 15:58:19,879 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.4 pTM=0.52 ipTM=0.181 tol=3.58 2024-07-27 15:58:49,839 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.1 pTM=0.52 ipTM=0.181 tol=3.46 2024-07-27 15:59:19,811 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.1 pTM=0.518 ipTM=0.175 tol=2.67 2024-07-27 15:59:49,816 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.3 pTM=0.519 ipTM=0.175 tol=2.48 2024-07-27 16:00:19,784 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60 pTM=0.519 ipTM=0.178 tol=2.19 2024-07-27 16:00:49,747 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.2 pTM=0.52 ipTM=0.179 tol=2.44 2024-07-27 16:01:19,705 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.1 pTM=0.52 ipTM=0.18 tol=2.08 2024-07-27 16:01:49,624 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.1 pTM=0.519 ipTM=0.176 tol=1.88 2024-07-27 16:02:19,581 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60 pTM=0.52 ipTM=0.177 tol=1.56 2024-07-27 16:02:49,535 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60 pTM=0.52 ipTM=0.176 tol=1.65 2024-07-27 16:03:19,526 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60 pTM=0.519 ipTM=0.175 tol=5.04 2024-07-27 16:03:49,478 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.2 pTM=0.521 ipTM=0.178 tol=5.28 2024-07-27 16:04:19,425 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.1 pTM=0.52 ipTM=0.18 tol=2.06 2024-07-27 16:04:49,353 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60 pTM=0.52 ipTM=0.177 tol=2.32 2024-07-27 16:05:19,271 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60 pTM=0.52 ipTM=0.177 tol=1.61 2024-07-27 16:05:49,193 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.1 pTM=0.52 ipTM=0.176 tol=1.73 2024-07-27 16:06:19,121 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.9 pTM=0.519 ipTM=0.177 tol=1.92 2024-07-27 16:06:49,052 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60 pTM=0.519 ipTM=0.175 tol=5.57 2024-07-27 16:07:18,976 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60 pTM=0.519 ipTM=0.176 tol=5.05 2024-07-27 16:07:48,897 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.2 pTM=0.52 ipTM=0.175 tol=1.74 2024-07-27 16:08:18,782 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.9 pTM=0.519 ipTM=0.175 tol=4.66 2024-07-27 16:08:48,673 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.9 pTM=0.519 ipTM=0.177 tol=4.77 2024-07-27 16:09:18,590 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.1 pTM=0.519 ipTM=0.174 tol=1.53 2024-07-27 16:09:48,478 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.9 pTM=0.52 ipTM=0.176 tol=1.83 2024-07-27 16:10:18,366 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.8 pTM=0.518 ipTM=0.173 tol=5.39 2024-07-27 16:10:48,288 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60 pTM=0.518 ipTM=0.173 tol=5.29 2024-07-27 16:11:18,261 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.9 pTM=0.518 ipTM=0.173 tol=1.46 2024-07-27 16:11:18,262 alphafold2_multimer_v3_model_5_seed_000 took 928.1s (30 recycles) 2024-07-27 16:11:19,045 reranking models by 'multimer' metric 2024-07-27 16:11:20,351 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 16:12:59,054 Relaxation took 100.0s 2024-07-27 16:12:59,054 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.5 pTM=0.54 ipTM=0.453 2024-07-27 16:14:36,144 Relaxation took 97.1s 2024-07-27 16:14:36,144 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.1 pTM=0.529 ipTM=0.336 2024-07-27 16:16:09,410 Relaxation took 93.3s 2024-07-27 16:16:09,411 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.7 pTM=0.522 ipTM=0.203 2024-07-27 16:18:29,258 Relaxation took 139.8s 2024-07-27 16:18:29,258 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.9 pTM=0.518 ipTM=0.173 2024-07-27 16:20:31,925 Relaxation took 122.7s 2024-07-27 16:20:31,925 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.3 pTM=0.511 ipTM=0.171 2024-07-27 16:20:34,151 Done