2024-07-27 15:27:00,506 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 15:27:00,840 Running on GPU 2024-07-27 15:27:04,239 Found 6 citations for tools or databases 2024-07-27 15:27:04,240 Query 1/1: TAF7_LRR1 (length 763) 2024-07-27 15:27:04,692 Sleeping for 10s. Reason: PENDING 2024-07-27 15:27:15,135 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:27:22,564 Sleeping for 9s. Reason: RUNNING 2024-07-27 15:27:31,993 Sleeping for 9s. Reason: RUNNING 2024-07-27 15:27:41,407 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:27:48,825 Sleeping for 5s. Reason: RUNNING 2024-07-27 15:27:54,248 Sleeping for 6s. Reason: RUNNING 2024-07-27 15:28:00,674 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:28:08,085 Sleeping for 8s. Reason: RUNNING 2024-07-27 15:28:16,515 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:28:25,459 Sleeping for 10s. Reason: PENDING 2024-07-27 15:28:35,909 Sleeping for 5s. Reason: RUNNING 2024-07-27 15:28:41,362 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:28:48,823 Sleeping for 9s. Reason: RUNNING 2024-07-27 15:28:58,272 Sleeping for 8s. Reason: RUNNING 2024-07-27 15:29:08,774 Setting max_seq=508, max_extra_seq=2048 2024-07-27 15:32:20,983 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67 pTM=0.458 ipTM=0.139 2024-07-27 15:32:32,435 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.4 pTM=0.459 ipTM=0.13 tol=4.2 2024-07-27 15:32:43,900 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.8 pTM=0.459 ipTM=0.146 tol=6.17 2024-07-27 15:32:55,375 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.4 pTM=0.459 ipTM=0.154 tol=3.87 2024-07-27 15:33:06,891 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.3 pTM=0.456 ipTM=0.151 tol=1.86 2024-07-27 15:33:18,413 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.2 pTM=0.451 ipTM=0.145 tol=2.04 2024-07-27 15:33:29,953 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.4 pTM=0.453 ipTM=0.151 tol=0.939 2024-07-27 15:33:41,516 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.4 pTM=0.452 ipTM=0.15 tol=0.693 2024-07-27 15:33:53,077 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.3 pTM=0.453 ipTM=0.15 tol=0.755 2024-07-27 15:34:04,644 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.5 pTM=0.457 ipTM=0.153 tol=0.776 2024-07-27 15:34:16,218 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.6 pTM=0.46 ipTM=0.157 tol=0.956 2024-07-27 15:34:27,794 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.2 pTM=0.458 ipTM=0.156 tol=1.22 2024-07-27 15:34:39,380 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.4 pTM=0.458 ipTM=0.157 tol=1.01 2024-07-27 15:34:50,972 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.5 pTM=0.462 ipTM=0.16 tol=0.983 2024-07-27 15:35:02,567 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.6 pTM=0.463 ipTM=0.164 tol=1.18 2024-07-27 15:35:14,170 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.7 pTM=0.459 ipTM=0.158 tol=1.63 2024-07-27 15:35:25,777 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.8 pTM=0.46 ipTM=0.16 tol=1.87 2024-07-27 15:35:37,393 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.9 pTM=0.462 ipTM=0.162 tol=0.966 2024-07-27 15:35:49,010 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.9 pTM=0.461 ipTM=0.168 tol=1.21 2024-07-27 15:36:00,631 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.8 pTM=0.461 ipTM=0.161 tol=1.07 2024-07-27 15:36:12,250 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.6 pTM=0.462 ipTM=0.16 tol=1.12 2024-07-27 15:36:23,866 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.4 pTM=0.462 ipTM=0.161 tol=1.28 2024-07-27 15:36:35,484 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.4 pTM=0.462 ipTM=0.167 tol=1.09 2024-07-27 15:36:47,106 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.8 pTM=0.461 ipTM=0.168 tol=1.25 2024-07-27 15:36:58,722 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.8 pTM=0.462 ipTM=0.172 tol=0.962 2024-07-27 15:37:10,346 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.8 pTM=0.464 ipTM=0.171 tol=1.09 2024-07-27 15:37:21,961 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.2 pTM=0.469 ipTM=0.205 tol=1.52 2024-07-27 15:37:33,585 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.7 pTM=0.466 ipTM=0.184 tol=3.11 2024-07-27 15:37:45,199 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.8 pTM=0.462 ipTM=0.168 tol=2.35 2024-07-27 15:37:56,834 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.7 pTM=0.459 ipTM=0.16 tol=2.21 2024-07-27 15:38:08,475 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70 pTM=0.464 ipTM=0.167 tol=1.87 2024-07-27 15:38:08,475 alphafold2_multimer_v3_model_1_seed_000 took 534.7s (30 recycles) 2024-07-27 15:38:20,504 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.8 pTM=0.443 ipTM=0.144 2024-07-27 15:38:32,170 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.3 pTM=0.45 ipTM=0.145 tol=9.85 2024-07-27 15:38:43,823 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.1 pTM=0.452 ipTM=0.149 tol=9.75 2024-07-27 15:38:55,489 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.2 pTM=0.448 ipTM=0.145 tol=4.66 2024-07-27 15:39:07,153 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.4 pTM=0.447 ipTM=0.142 tol=2.85 2024-07-27 15:39:18,818 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.4 pTM=0.445 ipTM=0.138 tol=2.68 2024-07-27 15:39:30,477 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.2 pTM=0.445 ipTM=0.14 tol=3.54 2024-07-27 15:39:42,143 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.2 pTM=0.444 ipTM=0.141 tol=2.94 2024-07-27 15:39:53,794 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.1 pTM=0.446 ipTM=0.143 tol=2.02 2024-07-27 15:40:05,455 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.2 pTM=0.446 ipTM=0.144 tol=2.14 2024-07-27 15:40:17,106 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.6 pTM=0.451 ipTM=0.149 tol=2.67 2024-07-27 15:40:28,762 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.6 pTM=0.45 ipTM=0.15 tol=2.32 2024-07-27 15:40:40,419 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.2 pTM=0.449 ipTM=0.147 tol=2.12 2024-07-27 15:40:52,085 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.8 pTM=0.453 ipTM=0.149 tol=1.77 2024-07-27 15:41:03,742 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.4 pTM=0.449 ipTM=0.144 tol=1.96 2024-07-27 15:41:15,403 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.4 pTM=0.447 ipTM=0.143 tol=1.64 2024-07-27 15:41:27,061 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.6 pTM=0.451 ipTM=0.147 tol=2.73 2024-07-27 15:41:38,723 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.6 pTM=0.452 ipTM=0.146 tol=1.77 2024-07-27 15:41:50,367 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.6 pTM=0.452 ipTM=0.149 tol=1.43 2024-07-27 15:42:02,039 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.8 pTM=0.452 ipTM=0.145 tol=2.16 2024-07-27 15:42:13,701 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.7 pTM=0.453 ipTM=0.147 tol=2.34 2024-07-27 15:42:25,342 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.4 pTM=0.454 ipTM=0.149 tol=2.88 2024-07-27 15:42:36,998 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.9 pTM=0.459 ipTM=0.278 tol=3.43 2024-07-27 15:42:48,650 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.1 pTM=0.469 ipTM=0.422 tol=3.62 2024-07-27 15:43:00,289 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.6 pTM=0.482 ipTM=0.458 tol=2.51 2024-07-27 15:43:11,937 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.4 pTM=0.475 ipTM=0.455 tol=2.49 2024-07-27 15:43:23,582 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.2 pTM=0.475 ipTM=0.454 tol=1.69 2024-07-27 15:43:35,222 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.4 pTM=0.479 ipTM=0.449 tol=1.43 2024-07-27 15:43:46,846 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.9 pTM=0.483 ipTM=0.471 tol=1.68 2024-07-27 15:43:58,479 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.9 pTM=0.482 ipTM=0.471 tol=1.6 2024-07-27 15:44:10,102 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.9 pTM=0.481 ipTM=0.474 tol=1.38 2024-07-27 15:44:10,103 alphafold2_multimer_v3_model_2_seed_000 took 361.3s (30 recycles) 2024-07-27 15:44:22,137 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.8 pTM=0.446 ipTM=0.136 2024-07-27 15:44:33,810 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.9 pTM=0.448 ipTM=0.114 tol=8.41 2024-07-27 15:44:45,488 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.1 pTM=0.445 ipTM=0.121 tol=7.61 2024-07-27 15:44:57,164 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.2 pTM=0.445 ipTM=0.126 tol=4.66 2024-07-27 15:45:08,831 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.2 pTM=0.449 ipTM=0.137 tol=3.75 2024-07-27 15:45:20,509 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.4 pTM=0.444 ipTM=0.131 tol=1.15 2024-07-27 15:45:32,190 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.3 pTM=0.439 ipTM=0.132 tol=1.1 2024-07-27 15:45:43,859 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.6 pTM=0.445 ipTM=0.131 tol=0.86 2024-07-27 15:45:55,538 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.4 pTM=0.443 ipTM=0.132 tol=0.865 2024-07-27 15:46:07,215 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.4 pTM=0.443 ipTM=0.131 tol=1.13 2024-07-27 15:46:18,886 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.6 pTM=0.448 ipTM=0.133 tol=1.06 2024-07-27 15:46:30,563 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.6 pTM=0.443 ipTM=0.125 tol=1.68 2024-07-27 15:46:42,237 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.4 pTM=0.447 ipTM=0.133 tol=1.08 2024-07-27 15:46:53,909 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.5 pTM=0.447 ipTM=0.133 tol=0.884 2024-07-27 15:47:05,575 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.5 pTM=0.447 ipTM=0.134 tol=0.992 2024-07-27 15:47:17,263 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.6 pTM=0.444 ipTM=0.13 tol=1.25 2024-07-27 15:47:28,941 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.7 pTM=0.448 ipTM=0.132 tol=1.04 2024-07-27 15:47:40,616 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.4 pTM=0.447 ipTM=0.132 tol=0.826 2024-07-27 15:47:52,274 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.5 pTM=0.446 ipTM=0.133 tol=0.881 2024-07-27 15:48:03,945 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.5 pTM=0.449 ipTM=0.133 tol=0.903 2024-07-27 15:48:15,609 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.6 pTM=0.45 ipTM=0.13 tol=1.05 2024-07-27 15:48:27,252 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.2 pTM=0.449 ipTM=0.132 tol=0.983 2024-07-27 15:48:38,919 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.4 pTM=0.449 ipTM=0.134 tol=0.815 2024-07-27 15:48:50,580 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.4 pTM=0.445 ipTM=0.127 tol=1.3 2024-07-27 15:49:02,212 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.7 pTM=0.499 ipTM=0.364 tol=16.9 2024-07-27 15:49:13,845 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.3 pTM=0.548 ipTM=0.521 tol=4.14 2024-07-27 15:49:25,473 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.1 pTM=0.561 ipTM=0.563 tol=3.44 2024-07-27 15:49:37,102 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.2 pTM=0.575 ipTM=0.601 tol=2.58 2024-07-27 15:49:48,742 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.8 pTM=0.581 ipTM=0.622 tol=1.27 2024-07-27 15:50:00,384 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.8 pTM=0.585 ipTM=0.635 tol=1.86 2024-07-27 15:50:12,031 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.8 pTM=0.585 ipTM=0.642 tol=1.47 2024-07-27 15:50:12,032 alphafold2_multimer_v3_model_3_seed_000 took 361.6s (30 recycles) 2024-07-27 15:50:24,117 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.1 pTM=0.431 ipTM=0.139 2024-07-27 15:50:35,804 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.9 pTM=0.447 ipTM=0.151 tol=6.36 2024-07-27 15:50:47,509 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.1 pTM=0.441 ipTM=0.131 tol=4.58 2024-07-27 15:50:59,213 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.9 pTM=0.44 ipTM=0.13 tol=3.39 2024-07-27 15:51:10,908 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.9 pTM=0.438 ipTM=0.124 tol=2.5 2024-07-27 15:51:22,609 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.1 pTM=0.437 ipTM=0.126 tol=1.86 2024-07-27 15:51:34,306 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.2 pTM=0.434 ipTM=0.12 tol=2.62 2024-07-27 15:51:46,003 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.9 pTM=0.435 ipTM=0.122 tol=2.82 2024-07-27 15:51:57,697 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.5 pTM=0.435 ipTM=0.118 tol=2.08 2024-07-27 15:52:09,392 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.5 pTM=0.435 ipTM=0.119 tol=2.06 2024-07-27 15:52:21,083 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.8 pTM=0.437 ipTM=0.118 tol=2.44 2024-07-27 15:52:32,773 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.7 pTM=0.436 ipTM=0.121 tol=1.65 2024-07-27 15:52:44,463 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.7 pTM=0.435 ipTM=0.119 tol=1.65 2024-07-27 15:52:56,153 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.8 pTM=0.436 ipTM=0.12 tol=2.32 2024-07-27 15:53:07,836 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.5 pTM=0.436 ipTM=0.119 tol=3.76 2024-07-27 15:53:19,519 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70 pTM=0.434 ipTM=0.115 tol=3.82 2024-07-27 15:53:31,208 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70 pTM=0.435 ipTM=0.118 tol=2.15 2024-07-27 15:53:42,896 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.9 pTM=0.436 ipTM=0.117 tol=2.45 2024-07-27 15:53:54,568 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.9 pTM=0.435 ipTM=0.117 tol=1.64 2024-07-27 15:54:06,252 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.4 pTM=0.436 ipTM=0.118 tol=4.18 2024-07-27 15:54:17,928 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.8 pTM=0.437 ipTM=0.116 tol=2.15 2024-07-27 15:54:29,604 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.4 pTM=0.435 ipTM=0.116 tol=2.66 2024-07-27 15:54:41,279 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.6 pTM=0.435 ipTM=0.119 tol=3.38 2024-07-27 15:54:52,954 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.9 pTM=0.435 ipTM=0.117 tol=2.65 2024-07-27 15:55:04,621 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.8 pTM=0.434 ipTM=0.118 tol=2.37 2024-07-27 15:55:16,300 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.1 pTM=0.435 ipTM=0.118 tol=1.8 2024-07-27 15:55:27,981 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.3 pTM=0.436 ipTM=0.119 tol=3.21 2024-07-27 15:55:39,660 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.8 pTM=0.435 ipTM=0.118 tol=3.05 2024-07-27 15:55:51,340 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.9 pTM=0.436 ipTM=0.117 tol=2.15 2024-07-27 15:56:03,014 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.5 pTM=0.434 ipTM=0.116 tol=5.66 2024-07-27 15:56:14,691 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.2 pTM=0.434 ipTM=0.115 tol=3.16 2024-07-27 15:56:14,691 alphafold2_multimer_v3_model_4_seed_000 took 362.3s (30 recycles) 2024-07-27 15:56:26,741 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.9 pTM=0.434 ipTM=0.115 2024-07-27 15:56:38,410 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.1 pTM=0.443 ipTM=0.126 tol=6.9 2024-07-27 15:56:50,083 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.1 pTM=0.444 ipTM=0.129 tol=4.51 2024-07-27 15:57:01,755 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.443 ipTM=0.131 tol=5.38 2024-07-27 15:57:13,431 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.441 ipTM=0.13 tol=2.28 2024-07-27 15:57:25,104 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.9 pTM=0.438 ipTM=0.131 tol=2.3 2024-07-27 15:57:36,782 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68 pTM=0.436 ipTM=0.128 tol=1.57 2024-07-27 15:57:48,455 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.1 pTM=0.438 ipTM=0.129 tol=1.29 2024-07-27 15:58:00,125 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68 pTM=0.441 ipTM=0.131 tol=1.6 2024-07-27 15:58:11,804 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.1 pTM=0.44 ipTM=0.128 tol=1.16 2024-07-27 15:58:23,472 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.2 pTM=0.445 ipTM=0.128 tol=1.54 2024-07-27 15:58:35,136 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.4 pTM=0.444 ipTM=0.126 tol=1.83 2024-07-27 15:58:46,809 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.1 pTM=0.442 ipTM=0.124 tol=1.33 2024-07-27 15:58:58,458 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.4 pTM=0.501 ipTM=0.401 tol=16.1 2024-07-27 15:59:10,087 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.9 pTM=0.554 ipTM=0.57 tol=8.42 2024-07-27 15:59:21,719 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.2 pTM=0.566 ipTM=0.606 tol=3.93 2024-07-27 15:59:33,355 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.4 pTM=0.571 ipTM=0.621 tol=4.04 2024-07-27 15:59:44,981 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.6 pTM=0.575 ipTM=0.622 tol=1.6 2024-07-27 15:59:56,617 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.6 pTM=0.571 ipTM=0.624 tol=1.4 2024-07-27 16:00:08,249 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.6 pTM=0.575 ipTM=0.627 tol=1.17 2024-07-27 16:00:19,888 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.7 pTM=0.577 ipTM=0.629 tol=3.04 2024-07-27 16:00:31,523 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.1 pTM=0.57 ipTM=0.617 tol=2.28 2024-07-27 16:00:43,157 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.4 pTM=0.572 ipTM=0.622 tol=2 2024-07-27 16:00:54,785 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.4 pTM=0.575 ipTM=0.624 tol=1.7 2024-07-27 16:01:06,421 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.2 pTM=0.571 ipTM=0.625 tol=1.21 2024-07-27 16:01:18,054 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.4 pTM=0.572 ipTM=0.622 tol=2.3 2024-07-27 16:01:29,679 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.7 pTM=0.574 ipTM=0.62 tol=2.14 2024-07-27 16:01:41,315 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.6 pTM=0.573 ipTM=0.624 tol=4.59 2024-07-27 16:01:52,948 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.6 pTM=0.573 ipTM=0.621 tol=4.8 2024-07-27 16:02:04,565 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.6 pTM=0.576 ipTM=0.621 tol=2.31 2024-07-27 16:02:16,188 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.4 pTM=0.577 ipTM=0.623 tol=2.43 2024-07-27 16:02:16,189 alphafold2_multimer_v3_model_5_seed_000 took 361.1s (30 recycles) 2024-07-27 16:02:16,561 reranking models by 'multimer' metric 2024-07-27 16:02:19,564 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 16:03:09,649 Relaxation took 53.1s 2024-07-27 16:03:09,649 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.8 pTM=0.585 ipTM=0.642 2024-07-27 16:04:09,763 Relaxation took 60.1s 2024-07-27 16:04:09,763 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.4 pTM=0.577 ipTM=0.623 2024-07-27 16:04:47,775 Relaxation took 38.0s 2024-07-27 16:04:47,776 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.9 pTM=0.481 ipTM=0.474 2024-07-27 16:05:45,994 Relaxation took 58.2s 2024-07-27 16:05:45,994 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70 pTM=0.464 ipTM=0.167 2024-07-27 16:06:50,478 Relaxation took 64.5s 2024-07-27 16:06:50,478 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.2 pTM=0.434 ipTM=0.115 2024-07-27 16:06:51,806 Done