2024-07-27 15:39:29,851 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 15:39:30,218 Running on GPU
2024-07-27 15:39:33,656 Found 6 citations for tools or databases
2024-07-27 15:39:33,656 Query 1/1: TAF7_RAB40AL (length 627)
2024-07-27 15:39:34,102 Sleeping for 8s. Reason: PENDING
2024-07-27 15:39:42,523 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:39:51,956 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:40:01,364 Sleeping for 7s. Reason: RUNNING
2024-07-27 15:40:08,792 Sleeping for 5s. Reason: RUNNING
2024-07-27 15:40:14,205 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:40:23,650 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:40:33,087 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:40:42,516 Sleeping for 6s. Reason: RUNNING
2024-07-27 15:40:48,978 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:40:58,438 Sleeping for 7s. Reason: RUNNING
2024-07-27 15:41:05,871 Sleeping for 7s. Reason: RUNNING
2024-07-27 15:41:15,003 Sleeping for 8s. Reason: PENDING
2024-07-27 15:41:23,438 Sleeping for 6s. Reason: RUNNING
2024-07-27 15:41:29,854 Sleeping for 10s. Reason: RUNNING
2024-07-27 15:41:40,281 Sleeping for 10s. Reason: RUNNING
2024-07-27 15:41:50,710 Sleeping for 8s. Reason: RUNNING
2024-07-27 15:41:59,129 Sleeping for 9s. Reason: RUNNING
2024-07-27 15:42:08,541 Sleeping for 10s. Reason: RUNNING
2024-07-27 15:42:21,538 Setting max_seq=508, max_extra_seq=2048
2024-07-27 15:46:29,700 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57 pTM=0.367 ipTM=0.232
2024-07-27 15:46:40,547 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.1 pTM=0.347 ipTM=0.143 tol=5.1
2024-07-27 15:46:51,405 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.2 pTM=0.364 ipTM=0.152 tol=4.55
2024-07-27 15:47:02,283 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.5 pTM=0.356 ipTM=0.133 tol=3.75
2024-07-27 15:47:13,172 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.5 pTM=0.347 ipTM=0.137 tol=1.85
2024-07-27 15:47:24,067 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.6 pTM=0.346 ipTM=0.133 tol=1.86
2024-07-27 15:47:34,978 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.9 pTM=0.347 ipTM=0.137 tol=3.62
2024-07-27 15:47:45,896 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.2 pTM=0.348 ipTM=0.134 tol=3.27
2024-07-27 15:47:56,825 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58 pTM=0.348 ipTM=0.137 tol=1.79
2024-07-27 15:48:07,757 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.9 pTM=0.345 ipTM=0.136 tol=1.36
2024-07-27 15:48:18,696 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.1 pTM=0.346 ipTM=0.137 tol=1.22
2024-07-27 15:48:29,631 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.9 pTM=0.347 ipTM=0.133 tol=1.75
2024-07-27 15:48:40,571 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.7 pTM=0.349 ipTM=0.135 tol=1.71
2024-07-27 15:48:51,520 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.2 pTM=0.349 ipTM=0.134 tol=1.67
2024-07-27 15:49:02,462 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.7 pTM=0.349 ipTM=0.133 tol=1.47
2024-07-27 15:49:13,405 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.7 pTM=0.347 ipTM=0.136 tol=1.19
2024-07-27 15:49:24,357 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.1 pTM=0.35 ipTM=0.136 tol=1.76
2024-07-27 15:49:35,304 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.1 pTM=0.348 ipTM=0.135 tol=1.71
2024-07-27 15:49:46,254 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.1 pTM=0.348 ipTM=0.136 tol=1.65
2024-07-27 15:49:57,202 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.5 pTM=0.346 ipTM=0.139 tol=1.62
2024-07-27 15:50:08,140 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.7 pTM=0.349 ipTM=0.138 tol=1.5
2024-07-27 15:50:19,067 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.8 pTM=0.347 ipTM=0.135 tol=1.71
2024-07-27 15:50:30,006 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.8 pTM=0.349 ipTM=0.14 tol=4.54
2024-07-27 15:50:40,947 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.9 pTM=0.344 ipTM=0.136 tol=3.25
2024-07-27 15:50:51,892 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.5 pTM=0.346 ipTM=0.139 tol=2.5
2024-07-27 15:51:02,830 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.8 pTM=0.347 ipTM=0.137 tol=2.76
2024-07-27 15:51:13,759 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.7 pTM=0.347 ipTM=0.137 tol=2.38
2024-07-27 15:51:24,682 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.4 pTM=0.347 ipTM=0.139 tol=2.33
2024-07-27 15:51:35,619 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.1 pTM=0.348 ipTM=0.139 tol=2.55
2024-07-27 15:51:46,552 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.2 pTM=0.344 ipTM=0.137 tol=2.11
2024-07-27 15:51:57,482 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58 pTM=0.348 ipTM=0.137 tol=1.28
2024-07-27 15:51:57,483 alphafold2_multimer_v3_model_1_seed_000 took 569.0s (30 recycles)
2024-07-27 15:52:08,760 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.2 pTM=0.393 ipTM=0.183
2024-07-27 15:52:19,696 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.7 pTM=0.404 ipTM=0.217 tol=11.9
2024-07-27 15:52:30,631 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.7 pTM=0.391 ipTM=0.202 tol=7.25
2024-07-27 15:52:41,566 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.3 pTM=0.377 ipTM=0.197 tol=4.93
2024-07-27 15:52:52,496 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58 pTM=0.367 ipTM=0.169 tol=2.35
2024-07-27 15:53:03,421 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.1 pTM=0.353 ipTM=0.145 tol=2.81
2024-07-27 15:53:14,354 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.7 pTM=0.363 ipTM=0.154 tol=1.81
2024-07-27 15:53:25,288 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.8 pTM=0.36 ipTM=0.161 tol=1.84
2024-07-27 15:53:36,219 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.7 pTM=0.384 ipTM=0.192 tol=2.48
2024-07-27 15:53:47,148 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.8 pTM=0.366 ipTM=0.168 tol=1.92
2024-07-27 15:53:58,066 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.7 pTM=0.386 ipTM=0.214 tol=1.53
2024-07-27 15:54:08,980 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.1 pTM=0.37 ipTM=0.182 tol=1.02
2024-07-27 15:54:19,884 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.1 pTM=0.372 ipTM=0.184 tol=1.06
2024-07-27 15:54:30,804 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.2 pTM=0.368 ipTM=0.182 tol=0.773
2024-07-27 15:54:41,701 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58 pTM=0.375 ipTM=0.186 tol=1.03
2024-07-27 15:54:52,604 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58 pTM=0.367 ipTM=0.187 tol=0.985
2024-07-27 15:55:03,533 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.7 pTM=0.383 ipTM=0.187 tol=1.96
2024-07-27 15:55:14,440 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.8 pTM=0.375 ipTM=0.189 tol=2.12
2024-07-27 15:55:25,339 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.7 pTM=0.38 ipTM=0.178 tol=1.43
2024-07-27 15:55:36,252 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.8 pTM=0.366 ipTM=0.184 tol=3.06
2024-07-27 15:55:47,164 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.9 pTM=0.384 ipTM=0.181 tol=1.8
2024-07-27 15:55:58,078 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.8 pTM=0.369 ipTM=0.167 tol=2.75
2024-07-27 15:56:08,977 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.9 pTM=0.387 ipTM=0.222 tol=3.36
2024-07-27 15:56:19,890 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.4 pTM=0.374 ipTM=0.188 tol=2.45
2024-07-27 15:56:30,809 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.6 pTM=0.369 ipTM=0.169 tol=2.03
2024-07-27 15:56:41,729 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.8 pTM=0.364 ipTM=0.166 tol=1.21
2024-07-27 15:56:52,645 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.4 pTM=0.375 ipTM=0.172 tol=1.55
2024-07-27 15:57:03,548 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.6 pTM=0.364 ipTM=0.173 tol=1.02
2024-07-27 15:57:14,466 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.3 pTM=0.375 ipTM=0.161 tol=1.32
2024-07-27 15:57:25,387 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.4 pTM=0.359 ipTM=0.155 tol=1.85
2024-07-27 15:57:36,305 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.7 pTM=0.381 ipTM=0.2 tol=1.39
2024-07-27 15:57:36,305 alphafold2_multimer_v3_model_2_seed_000 took 338.5s (30 recycles)
2024-07-27 15:57:47,587 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56 pTM=0.329 ipTM=0.156
2024-07-27 15:57:58,548 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.7 pTM=0.339 ipTM=0.154 tol=15.7
2024-07-27 15:58:09,509 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.6 pTM=0.346 ipTM=0.139 tol=5.93
2024-07-27 15:58:20,464 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.35 ipTM=0.132 tol=4.77
2024-07-27 15:58:31,416 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.6 pTM=0.343 ipTM=0.14 tol=4.96
2024-07-27 15:58:42,383 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.5 pTM=0.345 ipTM=0.133 tol=6.34
2024-07-27 15:58:53,346 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.4 pTM=0.344 ipTM=0.129 tol=7.46
2024-07-27 15:59:04,298 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.1 pTM=0.354 ipTM=0.131 tol=4.71
2024-07-27 15:59:15,247 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.4 pTM=0.349 ipTM=0.13 tol=3.52
2024-07-27 15:59:26,205 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.4 pTM=0.352 ipTM=0.125 tol=3.4
2024-07-27 15:59:37,154 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.3 pTM=0.348 ipTM=0.134 tol=4.04
2024-07-27 15:59:48,119 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.4 pTM=0.347 ipTM=0.128 tol=4.72
2024-07-27 15:59:59,089 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58 pTM=0.346 ipTM=0.13 tol=3.49
2024-07-27 16:00:10,048 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.6 pTM=0.348 ipTM=0.128 tol=4.04
2024-07-27 16:00:21,048 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.9 pTM=0.349 ipTM=0.132 tol=4.23
2024-07-27 16:00:32,069 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59 pTM=0.349 ipTM=0.128 tol=4
2024-07-27 16:00:43,078 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.3 pTM=0.352 ipTM=0.13 tol=4.4
2024-07-27 16:00:54,092 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.8 pTM=0.35 ipTM=0.127 tol=4.16
2024-07-27 16:01:05,102 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.6 pTM=0.351 ipTM=0.129 tol=5.72
2024-07-27 16:01:16,114 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.6 pTM=0.354 ipTM=0.133 tol=4.61
2024-07-27 16:01:27,116 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.2 pTM=0.347 ipTM=0.131 tol=3.69
2024-07-27 16:01:38,125 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.9 pTM=0.352 ipTM=0.131 tol=3.16
2024-07-27 16:01:49,129 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.5 pTM=0.351 ipTM=0.134 tol=1.9
2024-07-27 16:02:00,139 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59 pTM=0.352 ipTM=0.128 tol=2.63
2024-07-27 16:02:11,089 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.2 pTM=0.36 ipTM=0.165 tol=3.41
2024-07-27 16:02:22,009 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.3 pTM=0.349 ipTM=0.124 tol=2.36
2024-07-27 16:02:32,984 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.2 pTM=0.35 ipTM=0.13 tol=1.57
2024-07-27 16:02:43,969 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.9 pTM=0.345 ipTM=0.129 tol=1.53
2024-07-27 16:02:54,919 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.1 pTM=0.346 ipTM=0.13 tol=4.8
2024-07-27 16:03:05,835 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.5 pTM=0.361 ipTM=0.176 tol=5.77
2024-07-27 16:03:16,775 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.5 pTM=0.351 ipTM=0.132 tol=3.12
2024-07-27 16:03:16,775 alphafold2_multimer_v3_model_3_seed_000 took 340.1s (30 recycles)
2024-07-27 16:03:28,101 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.325 ipTM=0.143
2024-07-27 16:03:39,074 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.1 pTM=0.33 ipTM=0.152 tol=14.4
2024-07-27 16:03:50,016 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.2 pTM=0.335 ipTM=0.236 tol=10.1
2024-07-27 16:04:00,971 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.8 pTM=0.328 ipTM=0.13 tol=10.8
2024-07-27 16:04:11,970 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.8 pTM=0.329 ipTM=0.146 tol=12
2024-07-27 16:04:22,941 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.4 pTM=0.34 ipTM=0.14 tol=9.02
2024-07-27 16:04:33,880 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.7 pTM=0.362 ipTM=0.134 tol=6.59
2024-07-27 16:04:44,817 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.2 pTM=0.362 ipTM=0.143 tol=4.79
2024-07-27 16:04:55,759 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.5 pTM=0.356 ipTM=0.128 tol=4.54
2024-07-27 16:05:06,702 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.2 pTM=0.361 ipTM=0.13 tol=3.6
2024-07-27 16:05:17,634 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.8 pTM=0.36 ipTM=0.129 tol=3.28
2024-07-27 16:05:28,600 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.3 pTM=0.36 ipTM=0.126 tol=2.68
2024-07-27 16:05:39,540 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.3 pTM=0.36 ipTM=0.126 tol=2.7
2024-07-27 16:05:50,481 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.7 pTM=0.357 ipTM=0.137 tol=4.45
2024-07-27 16:06:01,420 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.5 pTM=0.352 ipTM=0.121 tol=2.62
2024-07-27 16:06:12,362 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.3 pTM=0.358 ipTM=0.126 tol=2.73
2024-07-27 16:06:23,305 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.9 pTM=0.36 ipTM=0.126 tol=2.17
2024-07-27 16:06:34,262 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.9 pTM=0.358 ipTM=0.123 tol=2.64
2024-07-27 16:06:45,215 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.2 pTM=0.359 ipTM=0.13 tol=3.48
2024-07-27 16:06:56,160 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.7 pTM=0.359 ipTM=0.128 tol=2.07
2024-07-27 16:07:07,108 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.6 pTM=0.357 ipTM=0.121 tol=1.54
2024-07-27 16:07:18,051 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.5 pTM=0.358 ipTM=0.124 tol=1.79
2024-07-27 16:07:28,999 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.1 pTM=0.358 ipTM=0.123 tol=1.85
2024-07-27 16:07:39,948 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.2 pTM=0.356 ipTM=0.12 tol=1.28
2024-07-27 16:07:50,898 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60 pTM=0.354 ipTM=0.124 tol=1.41
2024-07-27 16:08:01,848 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60 pTM=0.352 ipTM=0.12 tol=2.23
2024-07-27 16:08:12,790 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.3 pTM=0.353 ipTM=0.122 tol=1.71
2024-07-27 16:08:23,741 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.2 pTM=0.353 ipTM=0.123 tol=1.82
2024-07-27 16:08:34,692 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60 pTM=0.351 ipTM=0.122 tol=1.29
2024-07-27 16:08:45,649 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60 pTM=0.355 ipTM=0.123 tol=1.11
2024-07-27 16:08:56,590 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.356 ipTM=0.122 tol=1.59
2024-07-27 16:08:56,591 alphafold2_multimer_v3_model_4_seed_000 took 339.5s (30 recycles)
2024-07-27 16:09:07,875 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.3 pTM=0.334 ipTM=0.144
2024-07-27 16:09:18,827 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56 pTM=0.358 ipTM=0.169 tol=10.6
2024-07-27 16:09:29,779 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.7 pTM=0.341 ipTM=0.172 tol=7.66
2024-07-27 16:09:40,733 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.8 pTM=0.333 ipTM=0.14 tol=4.7
2024-07-27 16:09:51,682 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.7 pTM=0.334 ipTM=0.135 tol=5.46
2024-07-27 16:10:02,631 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.8 pTM=0.331 ipTM=0.136 tol=3.25
2024-07-27 16:10:13,586 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.8 pTM=0.333 ipTM=0.135 tol=2.47
2024-07-27 16:10:24,527 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.3 pTM=0.331 ipTM=0.131 tol=3.67
2024-07-27 16:10:35,479 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.6 pTM=0.339 ipTM=0.132 tol=2.8
2024-07-27 16:10:46,415 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.4 pTM=0.335 ipTM=0.131 tol=3.53
2024-07-27 16:10:57,349 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.9 pTM=0.348 ipTM=0.129 tol=2.4
2024-07-27 16:11:08,289 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.7 pTM=0.343 ipTM=0.133 tol=3.16
2024-07-27 16:11:19,227 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.4 pTM=0.346 ipTM=0.132 tol=2.76
2024-07-27 16:11:30,166 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.6 pTM=0.34 ipTM=0.137 tol=3.24
2024-07-27 16:11:41,098 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.9 pTM=0.339 ipTM=0.132 tol=2.86
2024-07-27 16:11:52,037 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58 pTM=0.347 ipTM=0.136 tol=2.77
2024-07-27 16:12:02,980 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.6 pTM=0.348 ipTM=0.135 tol=2.31
2024-07-27 16:12:13,928 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58 pTM=0.344 ipTM=0.135 tol=3.38
2024-07-27 16:12:24,867 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.9 pTM=0.345 ipTM=0.129 tol=3.76
2024-07-27 16:12:35,806 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.9 pTM=0.35 ipTM=0.136 tol=2.4
2024-07-27 16:12:46,740 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.8 pTM=0.347 ipTM=0.131 tol=3.98
2024-07-27 16:12:57,672 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.9 pTM=0.349 ipTM=0.138 tol=2.86
2024-07-27 16:13:08,597 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.1 pTM=0.355 ipTM=0.13 tol=2.44
2024-07-27 16:13:19,541 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.3 pTM=0.351 ipTM=0.134 tol=2.77
2024-07-27 16:13:30,474 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.6 pTM=0.347 ipTM=0.132 tol=2.87
2024-07-27 16:13:41,411 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58 pTM=0.35 ipTM=0.135 tol=1.92
2024-07-27 16:13:52,347 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.1 pTM=0.351 ipTM=0.13 tol=3.55
2024-07-27 16:14:03,288 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.1 pTM=0.349 ipTM=0.137 tol=4.98
2024-07-27 16:14:14,220 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.8 pTM=0.352 ipTM=0.133 tol=5.25
2024-07-27 16:14:25,155 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.2 pTM=0.352 ipTM=0.137 tol=3.57
2024-07-27 16:14:36,093 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.7 pTM=0.359 ipTM=0.145 tol=4.64
2024-07-27 16:14:36,093 alphafold2_multimer_v3_model_5_seed_000 took 339.2s (30 recycles)
2024-07-27 16:14:36,418 reranking models by 'multimer' metric
2024-07-27 16:14:39,356 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 16:15:37,242 Relaxation took 60.8s
2024-07-27 16:15:37,242 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.7 pTM=0.381 ipTM=0.2
2024-07-27 16:16:50,009 Relaxation took 72.8s
2024-07-27 16:16:50,009 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.7 pTM=0.359 ipTM=0.145
2024-07-27 16:17:32,422 Relaxation took 42.4s
2024-07-27 16:17:32,422 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58 pTM=0.348 ipTM=0.137
2024-07-27 16:18:40,917 Relaxation took 68.5s
2024-07-27 16:18:40,917 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.5 pTM=0.351 ipTM=0.132
2024-07-27 16:19:12,408 Relaxation took 31.5s
2024-07-27 16:19:12,408 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.356 ipTM=0.122
2024-07-27 16:19:13,891 Done