2024-07-27 15:43:52,105 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 15:43:53,424 Running on GPU 2024-07-27 15:43:56,823 Found 6 citations for tools or databases 2024-07-27 15:43:56,823 Query 1/1: TAF7_SPSB2 (length 612) 2024-07-27 15:43:57,302 Sleeping for 9s. Reason: PENDING 2024-07-27 15:44:06,748 Sleeping for 5s. Reason: RUNNING 2024-07-27 15:44:12,176 Sleeping for 9s. Reason: RUNNING 2024-07-27 15:44:21,623 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:44:29,074 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:44:36,502 Sleeping for 9s. Reason: RUNNING 2024-07-27 15:44:47,370 Sleeping for 5s. Reason: PENDING 2024-07-27 15:44:52,815 Sleeping for 5s. Reason: RUNNING 2024-07-27 15:44:58,242 Sleeping for 7s. Reason: RUNNING 2024-07-27 15:45:05,668 Sleeping for 8s. Reason: RUNNING 2024-07-27 15:45:14,089 Sleeping for 6s. Reason: RUNNING 2024-07-27 15:45:22,571 Setting max_seq=508, max_extra_seq=2048 2024-07-27 15:48:47,958 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.6 pTM=0.388 ipTM=0.109 2024-07-27 15:48:58,371 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.8 pTM=0.401 ipTM=0.123 tol=15.1 2024-07-27 15:49:08,760 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.3 pTM=0.405 ipTM=0.183 tol=5.61 2024-07-27 15:49:19,162 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.2 pTM=0.405 ipTM=0.18 tol=3.32 2024-07-27 15:49:29,567 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.6 pTM=0.401 ipTM=0.178 tol=2.84 2024-07-27 15:49:39,973 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.5 pTM=0.399 ipTM=0.156 tol=2 2024-07-27 15:49:50,382 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.4 pTM=0.396 ipTM=0.135 tol=4.02 2024-07-27 15:50:00,787 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.4 pTM=0.395 ipTM=0.137 tol=8.49 2024-07-27 15:50:11,190 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.6 pTM=0.399 ipTM=0.14 tol=6.37 2024-07-27 15:50:21,589 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.1 pTM=0.399 ipTM=0.163 tol=2.16 2024-07-27 15:50:31,989 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65.4 pTM=0.4 ipTM=0.176 tol=1.37 2024-07-27 15:50:42,391 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.1 pTM=0.399 ipTM=0.155 tol=1.9 2024-07-27 15:50:52,792 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.4 pTM=0.397 ipTM=0.131 tol=1.72 2024-07-27 15:51:03,205 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.4 pTM=0.399 ipTM=0.13 tol=1.71 2024-07-27 15:51:13,619 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.2 pTM=0.397 ipTM=0.138 tol=1.75 2024-07-27 15:51:24,041 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.1 pTM=0.398 ipTM=0.126 tol=1.99 2024-07-27 15:51:34,466 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.2 pTM=0.397 ipTM=0.128 tol=1.74 2024-07-27 15:51:44,893 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.4 pTM=0.397 ipTM=0.126 tol=1.5 2024-07-27 15:51:55,318 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.6 pTM=0.397 ipTM=0.127 tol=1.17 2024-07-27 15:52:05,741 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.4 pTM=0.396 ipTM=0.131 tol=1.75 2024-07-27 15:52:16,168 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.2 pTM=0.398 ipTM=0.127 tol=1.75 2024-07-27 15:52:26,601 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.9 pTM=0.398 ipTM=0.128 tol=2.25 2024-07-27 15:52:37,021 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=65.3 pTM=0.396 ipTM=0.124 tol=1.44 2024-07-27 15:52:47,455 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.5 pTM=0.396 ipTM=0.124 tol=2.42 2024-07-27 15:52:57,892 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.6 pTM=0.398 ipTM=0.125 tol=1.76 2024-07-27 15:53:08,322 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.9 pTM=0.396 ipTM=0.128 tol=1.23 2024-07-27 15:53:18,758 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.6 pTM=0.398 ipTM=0.125 tol=1.2 2024-07-27 15:53:29,201 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.4 pTM=0.399 ipTM=0.128 tol=0.996 2024-07-27 15:53:39,623 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.3 pTM=0.398 ipTM=0.131 tol=1.19 2024-07-27 15:53:50,055 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.2 pTM=0.398 ipTM=0.126 tol=0.761 2024-07-27 15:54:00,481 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.1 pTM=0.399 ipTM=0.128 tol=0.837 2024-07-27 15:54:00,481 alphafold2_multimer_v3_model_1_seed_000 took 497.0s (30 recycles) 2024-07-27 15:54:11,301 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65 pTM=0.397 ipTM=0.114 2024-07-27 15:54:21,770 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.4 pTM=0.396 ipTM=0.114 tol=6.52 2024-07-27 15:54:32,230 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.2 pTM=0.394 ipTM=0.109 tol=4.05 2024-07-27 15:54:42,700 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65 pTM=0.391 ipTM=0.114 tol=5.39 2024-07-27 15:54:53,172 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.4 pTM=0.386 ipTM=0.116 tol=9.14 2024-07-27 15:55:03,634 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.1 pTM=0.387 ipTM=0.121 tol=6.77 2024-07-27 15:55:14,100 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.2 pTM=0.386 ipTM=0.121 tol=9.87 2024-07-27 15:55:24,578 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.3 pTM=0.396 ipTM=0.134 tol=17.2 2024-07-27 15:55:35,062 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.1 pTM=0.397 ipTM=0.12 tol=7.98 2024-07-27 15:55:45,537 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.8 pTM=0.397 ipTM=0.126 tol=4.42 2024-07-27 15:55:56,014 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.4 pTM=0.395 ipTM=0.119 tol=5.6 2024-07-27 15:56:06,487 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.5 pTM=0.392 ipTM=0.119 tol=2.49 2024-07-27 15:56:16,964 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.4 pTM=0.387 ipTM=0.118 tol=9.49 2024-07-27 15:56:27,436 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67 pTM=0.39 ipTM=0.127 tol=4.45 2024-07-27 15:56:37,908 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.8 pTM=0.399 ipTM=0.131 tol=12.4 2024-07-27 15:56:48,379 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.401 ipTM=0.131 tol=7.3 2024-07-27 15:56:58,853 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.6 pTM=0.403 ipTM=0.133 tol=2.56 2024-07-27 15:57:09,332 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67 pTM=0.406 ipTM=0.138 tol=2.11 2024-07-27 15:57:19,807 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.7 pTM=0.406 ipTM=0.141 tol=1.58 2024-07-27 15:57:30,276 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.9 pTM=0.407 ipTM=0.149 tol=1.78 2024-07-27 15:57:40,751 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.5 pTM=0.408 ipTM=0.151 tol=1.22 2024-07-27 15:57:51,225 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.5 pTM=0.41 ipTM=0.157 tol=1.4 2024-07-27 15:58:01,701 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.6 pTM=0.41 ipTM=0.153 tol=1.73 2024-07-27 15:58:12,173 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.9 pTM=0.412 ipTM=0.16 tol=2.31 2024-07-27 15:58:22,652 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.1 pTM=0.411 ipTM=0.158 tol=5.61 2024-07-27 15:58:33,122 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.4 pTM=0.411 ipTM=0.163 tol=3.93 2024-07-27 15:58:43,593 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.1 pTM=0.411 ipTM=0.152 tol=7.3 2024-07-27 15:58:54,068 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.1 pTM=0.41 ipTM=0.158 tol=6.23 2024-07-27 15:59:04,532 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.8 pTM=0.408 ipTM=0.153 tol=3.57 2024-07-27 15:59:15,005 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67 pTM=0.412 ipTM=0.161 tol=5.19 2024-07-27 15:59:25,480 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.8 pTM=0.408 ipTM=0.155 tol=2.9 2024-07-27 15:59:25,480 alphafold2_multimer_v3_model_2_seed_000 took 324.6s (30 recycles) 2024-07-27 15:59:36,284 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.6 pTM=0.406 ipTM=0.181 2024-07-27 15:59:46,752 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.6 pTM=0.401 ipTM=0.131 tol=7.8 2024-07-27 15:59:57,204 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.1 pTM=0.41 ipTM=0.187 tol=6.13 2024-07-27 16:00:07,656 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.3 pTM=0.406 ipTM=0.136 tol=3.28 2024-07-27 16:00:18,121 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.2 pTM=0.403 ipTM=0.125 tol=3.16 2024-07-27 16:00:28,576 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66 pTM=0.404 ipTM=0.129 tol=2.55 2024-07-27 16:00:39,031 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66 pTM=0.402 ipTM=0.127 tol=2.57 2024-07-27 16:00:49,489 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.8 pTM=0.404 ipTM=0.131 tol=2.79 2024-07-27 16:00:59,951 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.6 pTM=0.403 ipTM=0.128 tol=2.24 2024-07-27 16:01:10,407 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.2 pTM=0.403 ipTM=0.137 tol=2.01 2024-07-27 16:01:20,866 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.1 pTM=0.401 ipTM=0.134 tol=2.6 2024-07-27 16:01:31,322 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.404 ipTM=0.171 tol=2.43 2024-07-27 16:01:41,782 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.3 pTM=0.4 ipTM=0.127 tol=1.62 2024-07-27 16:01:52,238 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.4 pTM=0.405 ipTM=0.145 tol=1.56 2024-07-27 16:02:02,688 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.4 pTM=0.403 ipTM=0.141 tol=2.56 2024-07-27 16:02:13,135 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.9 pTM=0.409 ipTM=0.223 tol=1.81 2024-07-27 16:02:23,591 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.6 pTM=0.403 ipTM=0.146 tol=1.54 2024-07-27 16:02:34,045 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.7 pTM=0.405 ipTM=0.146 tol=1.18 2024-07-27 16:02:44,489 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.9 pTM=0.401 ipTM=0.143 tol=1.49 2024-07-27 16:02:54,945 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68 pTM=0.403 ipTM=0.15 tol=1.59 2024-07-27 16:03:05,394 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.9 pTM=0.406 ipTM=0.149 tol=0.907 2024-07-27 16:03:15,840 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.9 pTM=0.411 ipTM=0.191 tol=1.29 2024-07-27 16:03:26,286 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.1 pTM=0.407 ipTM=0.149 tol=1.01 2024-07-27 16:03:36,737 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.3 pTM=0.41 ipTM=0.181 tol=1.31 2024-07-27 16:03:47,184 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=68 pTM=0.406 ipTM=0.151 tol=1.63 2024-07-27 16:03:57,634 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.2 pTM=0.408 ipTM=0.162 tol=1.24 2024-07-27 16:04:08,075 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68 pTM=0.408 ipTM=0.157 tol=1.12 2024-07-27 16:04:18,516 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.7 pTM=0.407 ipTM=0.167 tol=1.41 2024-07-27 16:04:28,955 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68 pTM=0.406 ipTM=0.148 tol=1.16 2024-07-27 16:04:39,403 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.7 pTM=0.405 ipTM=0.149 tol=1.36 2024-07-27 16:04:49,849 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.7 pTM=0.406 ipTM=0.146 tol=1.13 2024-07-27 16:04:49,850 alphafold2_multimer_v3_model_3_seed_000 took 324.0s (30 recycles) 2024-07-27 16:05:00,685 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.7 pTM=0.404 ipTM=0.172 2024-07-27 16:05:11,160 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.7 pTM=0.396 ipTM=0.117 tol=12.1 2024-07-27 16:05:21,624 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.1 pTM=0.398 ipTM=0.121 tol=5.39 2024-07-27 16:05:32,081 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.7 pTM=0.396 ipTM=0.113 tol=3.62 2024-07-27 16:05:42,539 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.9 pTM=0.399 ipTM=0.114 tol=5.42 2024-07-27 16:05:52,994 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.2 pTM=0.4 ipTM=0.113 tol=3.85 2024-07-27 16:06:03,450 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.7 pTM=0.395 ipTM=0.109 tol=7.58 2024-07-27 16:06:13,909 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.7 pTM=0.396 ipTM=0.111 tol=6.37 2024-07-27 16:06:24,369 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.6 pTM=0.397 ipTM=0.116 tol=2.25 2024-07-27 16:06:34,830 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.6 pTM=0.398 ipTM=0.11 tol=1.93 2024-07-27 16:06:45,291 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.4 pTM=0.391 ipTM=0.115 tol=2.17 2024-07-27 16:06:55,749 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.4 pTM=0.399 ipTM=0.116 tol=2.14 2024-07-27 16:07:06,212 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.2 pTM=0.394 ipTM=0.114 tol=1.72 2024-07-27 16:07:16,672 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.4 pTM=0.401 ipTM=0.112 tol=1.46 2024-07-27 16:07:27,136 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.2 pTM=0.399 ipTM=0.113 tol=1.6 2024-07-27 16:07:37,602 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.4 pTM=0.397 ipTM=0.109 tol=1.38 2024-07-27 16:07:48,064 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.6 pTM=0.399 ipTM=0.112 tol=1.75 2024-07-27 16:07:58,527 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.3 pTM=0.4 ipTM=0.112 tol=1.8 2024-07-27 16:08:08,987 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.6 pTM=0.397 ipTM=0.112 tol=1.84 2024-07-27 16:08:19,453 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.8 pTM=0.396 ipTM=0.113 tol=1 2024-07-27 16:08:29,918 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.6 pTM=0.396 ipTM=0.111 tol=1.47 2024-07-27 16:08:40,379 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.2 pTM=0.396 ipTM=0.115 tol=1.53 2024-07-27 16:08:50,844 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.8 pTM=0.395 ipTM=0.114 tol=1.32 2024-07-27 16:09:01,307 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.8 pTM=0.395 ipTM=0.115 tol=1.4 2024-07-27 16:09:11,773 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.4 pTM=0.395 ipTM=0.115 tol=1.8 2024-07-27 16:09:22,244 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.397 ipTM=0.118 tol=2.04 2024-07-27 16:09:32,713 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.5 pTM=0.394 ipTM=0.117 tol=2.58 2024-07-27 16:09:43,181 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.6 pTM=0.395 ipTM=0.118 tol=1.7 2024-07-27 16:09:53,647 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.8 pTM=0.394 ipTM=0.119 tol=2.28 2024-07-27 16:10:04,116 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.8 pTM=0.397 ipTM=0.118 tol=2.54 2024-07-27 16:10:14,585 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.8 pTM=0.394 ipTM=0.117 tol=3.23 2024-07-27 16:10:14,586 alphafold2_multimer_v3_model_4_seed_000 took 324.4s (30 recycles) 2024-07-27 16:10:25,420 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.1 pTM=0.381 ipTM=0.104 2024-07-27 16:10:35,896 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.6 pTM=0.399 ipTM=0.154 tol=21.1 2024-07-27 16:10:46,360 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.4 pTM=0.402 ipTM=0.126 tol=6.68 2024-07-27 16:10:56,827 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.3 pTM=0.403 ipTM=0.125 tol=3.27 2024-07-27 16:11:07,295 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.4 pTM=0.403 ipTM=0.125 tol=2.68 2024-07-27 16:11:17,760 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.9 pTM=0.406 ipTM=0.128 tol=1.82 2024-07-27 16:11:28,222 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.8 pTM=0.405 ipTM=0.127 tol=1.1 2024-07-27 16:11:38,686 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.7 pTM=0.406 ipTM=0.13 tol=1.23 2024-07-27 16:11:49,150 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.4 pTM=0.404 ipTM=0.128 tol=1.75 2024-07-27 16:11:59,614 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.7 pTM=0.404 ipTM=0.131 tol=0.869 2024-07-27 16:12:10,081 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.3 pTM=0.406 ipTM=0.13 tol=1.59 2024-07-27 16:12:20,546 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.6 pTM=0.405 ipTM=0.127 tol=1.91 2024-07-27 16:12:31,005 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.2 pTM=0.406 ipTM=0.13 tol=1.15 2024-07-27 16:12:41,468 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.1 pTM=0.409 ipTM=0.135 tol=1.38 2024-07-27 16:12:51,930 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.9 pTM=0.408 ipTM=0.136 tol=1.6 2024-07-27 16:13:02,398 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.1 pTM=0.406 ipTM=0.13 tol=1 2024-07-27 16:13:12,869 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65 pTM=0.407 ipTM=0.132 tol=1.02 2024-07-27 16:13:23,335 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.8 pTM=0.407 ipTM=0.131 tol=1.47 2024-07-27 16:13:33,794 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.2 pTM=0.406 ipTM=0.129 tol=1.16 2024-07-27 16:13:44,257 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.1 pTM=0.408 ipTM=0.13 tol=2.16 2024-07-27 16:13:54,722 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.1 pTM=0.407 ipTM=0.13 tol=1.42 2024-07-27 16:14:05,188 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.1 pTM=0.409 ipTM=0.134 tol=1.43 2024-07-27 16:14:15,644 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.1 pTM=0.409 ipTM=0.136 tol=1.94 2024-07-27 16:14:26,108 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.1 pTM=0.409 ipTM=0.135 tol=2.06 2024-07-27 16:14:36,568 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.2 pTM=0.408 ipTM=0.134 tol=2 2024-07-27 16:14:47,036 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.1 pTM=0.408 ipTM=0.133 tol=1.5 2024-07-27 16:14:57,498 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.2 pTM=0.409 ipTM=0.135 tol=1.47 2024-07-27 16:15:07,964 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.7 pTM=0.408 ipTM=0.134 tol=0.96 2024-07-27 16:15:18,427 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.9 pTM=0.408 ipTM=0.134 tol=0.964 2024-07-27 16:15:28,891 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.5 pTM=0.409 ipTM=0.134 tol=0.855 2024-07-27 16:15:39,351 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.9 pTM=0.406 ipTM=0.131 tol=1.14 2024-07-27 16:15:39,351 alphafold2_multimer_v3_model_5_seed_000 took 324.4s (30 recycles) 2024-07-27 16:15:39,709 reranking models by 'multimer' metric 2024-07-27 16:15:42,630 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 16:21:31,701 Relaxation took 352.0s 2024-07-27 16:21:31,701 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.8 pTM=0.408 ipTM=0.155 2024-07-27 16:21:55,598 Relaxation took 23.9s 2024-07-27 16:21:55,599 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.7 pTM=0.406 ipTM=0.146 2024-07-27 16:22:50,652 Relaxation took 55.1s 2024-07-27 16:22:50,652 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.9 pTM=0.406 ipTM=0.131 2024-07-27 16:23:41,376 Relaxation took 50.7s 2024-07-27 16:23:41,377 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.1 pTM=0.399 ipTM=0.128 2024-07-27 16:24:05,101 Relaxation took 23.7s 2024-07-27 16:24:05,101 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.8 pTM=0.394 ipTM=0.117 2024-07-27 16:24:06,667 Done