2024-07-27 16:28:35,855 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 16:28:36,164 Running on GPU 2024-07-27 16:28:38,226 Found 6 citations for tools or databases 2024-07-27 16:28:38,227 Query 1/1: TCF3_DCAF12 (length 1107) 2024-07-27 16:28:38,656 Sleeping for 9s. Reason: PENDING 2024-07-27 16:28:48,108 Sleeping for 5s. Reason: RUNNING 2024-07-27 16:28:53,525 Sleeping for 5s. Reason: RUNNING 2024-07-27 16:28:58,934 Sleeping for 9s. Reason: RUNNING 2024-07-27 16:29:08,354 Sleeping for 9s. Reason: RUNNING 2024-07-27 16:29:17,773 Sleeping for 5s. Reason: RUNNING 2024-07-27 16:29:23,216 Sleeping for 8s. Reason: RUNNING 2024-07-27 16:29:31,642 Sleeping for 10s. Reason: RUNNING 2024-07-27 16:29:42,052 Sleeping for 7s. Reason: RUNNING 2024-07-27 16:29:49,491 Sleeping for 10s. Reason: RUNNING 2024-07-27 16:29:59,915 Sleeping for 6s. Reason: RUNNING 2024-07-27 16:30:06,336 Sleeping for 5s. Reason: RUNNING 2024-07-27 16:30:11,780 Sleeping for 9s. Reason: RUNNING 2024-07-27 16:30:21,215 Sleeping for 9s. Reason: RUNNING 2024-07-27 16:30:30,665 Sleeping for 9s. Reason: RUNNING 2024-07-27 16:30:41,587 Sleeping for 9s. Reason: PENDING 2024-07-27 16:30:50,998 Sleeping for 5s. Reason: RUNNING 2024-07-27 16:30:56,407 Sleeping for 5s. Reason: RUNNING 2024-07-27 16:31:01,821 Sleeping for 6s. Reason: RUNNING 2024-07-27 16:31:08,248 Sleeping for 6s. Reason: RUNNING 2024-07-27 16:31:14,659 Sleeping for 6s. Reason: RUNNING 2024-07-27 16:31:21,079 Sleeping for 8s. Reason: RUNNING 2024-07-27 16:31:29,498 Sleeping for 8s. Reason: RUNNING 2024-07-27 16:31:37,916 Sleeping for 8s. Reason: RUNNING 2024-07-27 16:31:48,427 Setting max_seq=508, max_extra_seq=2048 2024-07-27 16:35:18,381 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.7 pTM=0.438 ipTM=0.225 2024-07-27 16:35:46,101 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.5 pTM=0.444 ipTM=0.253 tol=14.5 2024-07-27 16:36:13,980 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.8 pTM=0.447 ipTM=0.321 tol=8.48 2024-07-27 16:36:41,933 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.7 pTM=0.443 ipTM=0.31 tol=8.88 2024-07-27 16:37:09,943 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.8 pTM=0.443 ipTM=0.365 tol=7.02 2024-07-27 16:37:37,973 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.7 pTM=0.444 ipTM=0.378 tol=6.52 2024-07-27 16:38:06,058 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.9 pTM=0.442 ipTM=0.419 tol=7.25 2024-07-27 16:38:34,137 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44.8 pTM=0.443 ipTM=0.433 tol=4.82 2024-07-27 16:39:02,210 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.9 pTM=0.444 ipTM=0.415 tol=4.2 2024-07-27 16:39:30,302 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.8 pTM=0.443 ipTM=0.402 tol=3.68 2024-07-27 16:39:58,404 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.1 pTM=0.444 ipTM=0.453 tol=2.95 2024-07-27 16:40:26,509 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.9 pTM=0.443 ipTM=0.421 tol=2.9 2024-07-27 16:40:54,616 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.2 pTM=0.443 ipTM=0.435 tol=2.85 2024-07-27 16:41:22,723 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45 pTM=0.443 ipTM=0.417 tol=4.13 2024-07-27 16:41:50,833 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=45 pTM=0.443 ipTM=0.427 tol=5.12 2024-07-27 16:42:18,949 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45 pTM=0.442 ipTM=0.446 tol=5.2 2024-07-27 16:42:47,053 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45 pTM=0.443 ipTM=0.44 tol=6.3 2024-07-27 16:43:15,189 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.1 pTM=0.443 ipTM=0.42 tol=3.24 2024-07-27 16:43:43,282 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.1 pTM=0.442 ipTM=0.416 tol=4.79 2024-07-27 16:44:11,372 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.2 pTM=0.445 ipTM=0.42 tol=2.67 2024-07-27 16:44:39,458 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.2 pTM=0.443 ipTM=0.432 tol=2.84 2024-07-27 16:45:07,551 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.1 pTM=0.444 ipTM=0.423 tol=3.17 2024-07-27 16:45:35,640 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.2 pTM=0.444 ipTM=0.429 tol=6.34 2024-07-27 16:46:03,739 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45 pTM=0.443 ipTM=0.422 tol=3.24 2024-07-27 16:46:31,823 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.2 pTM=0.444 ipTM=0.437 tol=2.99 2024-07-27 16:46:59,931 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45 pTM=0.443 ipTM=0.424 tol=6.76 2024-07-27 16:47:28,041 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=44.8 pTM=0.441 ipTM=0.447 tol=3.97 2024-07-27 16:47:56,148 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=44.9 pTM=0.443 ipTM=0.419 tol=5.3 2024-07-27 16:48:24,257 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=44.8 pTM=0.441 ipTM=0.413 tol=5.03 2024-07-27 16:48:52,369 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.9 pTM=0.444 ipTM=0.429 tol=4.03 2024-07-27 16:49:20,515 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45 pTM=0.441 ipTM=0.389 tol=2.39 2024-07-27 16:49:20,516 alphafold2_multimer_v3_model_1_seed_000 took 1048.6s (30 recycles) 2024-07-27 16:49:49,356 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.3 pTM=0.433 ipTM=0.253 2024-07-27 16:50:17,537 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.2 pTM=0.438 ipTM=0.261 tol=17.8 2024-07-27 16:50:45,729 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.7 pTM=0.44 ipTM=0.321 tol=10.1 2024-07-27 16:51:13,892 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.6 pTM=0.443 ipTM=0.377 tol=10.8 2024-07-27 16:51:42,091 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.8 pTM=0.443 ipTM=0.442 tol=4.59 2024-07-27 16:52:10,290 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.9 pTM=0.444 ipTM=0.509 tol=4.32 2024-07-27 16:52:38,511 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.1 pTM=0.444 ipTM=0.567 tol=3.53 2024-07-27 16:53:06,738 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.2 pTM=0.444 ipTM=0.6 tol=2.82 2024-07-27 16:53:34,960 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.2 pTM=0.444 ipTM=0.616 tol=3.34 2024-07-27 16:54:03,147 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.2 pTM=0.444 ipTM=0.617 tol=4.7 2024-07-27 16:54:31,365 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.4 pTM=0.444 ipTM=0.662 tol=3.53 2024-07-27 16:54:59,604 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.4 pTM=0.444 ipTM=0.672 tol=3.51 2024-07-27 16:55:27,823 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.4 pTM=0.443 ipTM=0.69 tol=3.9 2024-07-27 16:55:56,041 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.6 pTM=0.443 ipTM=0.69 tol=3.94 2024-07-27 16:56:24,268 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.5 pTM=0.444 ipTM=0.696 tol=2.79 2024-07-27 16:56:52,491 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.6 pTM=0.443 ipTM=0.719 tol=3.07 2024-07-27 16:57:20,745 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.6 pTM=0.444 ipTM=0.718 tol=2.96 2024-07-27 16:57:48,983 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.6 pTM=0.443 ipTM=0.724 tol=2.83 2024-07-27 16:58:17,230 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.7 pTM=0.443 ipTM=0.732 tol=3.12 2024-07-27 16:58:45,478 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.6 pTM=0.443 ipTM=0.741 tol=4.3 2024-07-27 16:59:13,717 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.6 pTM=0.444 ipTM=0.731 tol=3.05 2024-07-27 16:59:41,959 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.7 pTM=0.444 ipTM=0.735 tol=2.52 2024-07-27 17:00:10,227 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.6 pTM=0.443 ipTM=0.746 tol=2.46 2024-07-27 17:00:38,494 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.7 pTM=0.442 ipTM=0.739 tol=2.55 2024-07-27 17:01:06,757 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46.8 pTM=0.445 ipTM=0.751 tol=2.64 2024-07-27 17:01:34,978 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.6 pTM=0.443 ipTM=0.739 tol=2.11 2024-07-27 17:02:03,204 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.8 pTM=0.442 ipTM=0.744 tol=2.56 2024-07-27 17:02:31,410 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46.5 pTM=0.442 ipTM=0.731 tol=2.69 2024-07-27 17:02:59,650 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=46.7 pTM=0.443 ipTM=0.739 tol=2.57 2024-07-27 17:03:27,887 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.7 pTM=0.444 ipTM=0.74 tol=2.12 2024-07-27 17:03:56,141 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.8 pTM=0.444 ipTM=0.748 tol=2.09 2024-07-27 17:03:56,142 alphafold2_multimer_v3_model_2_seed_000 took 874.9s (30 recycles) 2024-07-27 17:04:25,107 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.1 pTM=0.446 ipTM=0.256 2024-07-27 17:04:53,389 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.3 pTM=0.442 ipTM=0.292 tol=12.3 2024-07-27 17:05:21,725 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.1 pTM=0.451 ipTM=0.562 tol=8.1 2024-07-27 17:05:50,055 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.3 pTM=0.452 ipTM=0.566 tol=11.2 2024-07-27 17:06:18,370 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.3 pTM=0.446 ipTM=0.464 tol=6.46 2024-07-27 17:06:46,722 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.3 pTM=0.447 ipTM=0.462 tol=9.76 2024-07-27 17:07:15,056 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.2 pTM=0.446 ipTM=0.433 tol=6.89 2024-07-27 17:07:43,394 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.4 pTM=0.45 ipTM=0.466 tol=4.36 2024-07-27 17:08:11,705 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.4 pTM=0.447 ipTM=0.413 tol=3 2024-07-27 17:08:40,006 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.5 pTM=0.451 ipTM=0.438 tol=2.82 2024-07-27 17:09:08,275 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.6 pTM=0.45 ipTM=0.443 tol=2.49 2024-07-27 17:09:36,561 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.6 pTM=0.451 ipTM=0.426 tol=2.87 2024-07-27 17:10:04,843 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.6 pTM=0.45 ipTM=0.418 tol=3.66 2024-07-27 17:10:33,143 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.6 pTM=0.451 ipTM=0.435 tol=3.24 2024-07-27 17:11:01,450 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.8 pTM=0.451 ipTM=0.442 tol=2.88 2024-07-27 17:11:29,737 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.7 pTM=0.453 ipTM=0.46 tol=2.49 2024-07-27 17:11:58,019 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.7 pTM=0.452 ipTM=0.493 tol=7.36 2024-07-27 17:12:26,310 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.6 pTM=0.452 ipTM=0.466 tol=3.72 2024-07-27 17:12:54,606 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.8 pTM=0.452 ipTM=0.469 tol=6.18 2024-07-27 17:13:22,892 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.8 pTM=0.453 ipTM=0.476 tol=2.43 2024-07-27 17:13:51,188 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.9 pTM=0.451 ipTM=0.459 tol=1.83 2024-07-27 17:14:19,483 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.7 pTM=0.452 ipTM=0.469 tol=2.26 2024-07-27 17:14:47,762 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.9 pTM=0.452 ipTM=0.449 tol=2.23 2024-07-27 17:15:16,041 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.8 pTM=0.452 ipTM=0.477 tol=1.98 2024-07-27 17:15:44,296 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.1 pTM=0.454 ipTM=0.451 tol=2.32 2024-07-27 17:16:12,566 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.7 pTM=0.452 ipTM=0.47 tol=3.15 2024-07-27 17:16:40,880 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46 pTM=0.454 ipTM=0.471 tol=2.75 2024-07-27 17:17:09,206 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.7 pTM=0.453 ipTM=0.467 tol=3.05 2024-07-27 17:17:37,524 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.8 pTM=0.452 ipTM=0.445 tol=2.91 2024-07-27 17:18:05,830 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.8 pTM=0.453 ipTM=0.488 tol=2.77 2024-07-27 17:18:34,160 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.8 pTM=0.452 ipTM=0.449 tol=2.49 2024-07-27 17:18:34,161 alphafold2_multimer_v3_model_3_seed_000 took 877.3s (30 recycles) 2024-07-27 17:19:03,128 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.5 pTM=0.444 ipTM=0.239 2024-07-27 17:19:31,383 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.5 pTM=0.438 ipTM=0.374 tol=13.7 2024-07-27 17:19:59,710 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.2 pTM=0.438 ipTM=0.397 tol=14.5 2024-07-27 17:20:28,063 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.8 pTM=0.439 ipTM=0.394 tol=18.8 2024-07-27 17:20:56,431 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.5 pTM=0.444 ipTM=0.394 tol=12.9 2024-07-27 17:21:24,804 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.6 pTM=0.445 ipTM=0.408 tol=8.47 2024-07-27 17:21:53,181 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.6 pTM=0.445 ipTM=0.405 tol=7.87 2024-07-27 17:22:21,536 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.6 pTM=0.445 ipTM=0.401 tol=6.07 2024-07-27 17:22:49,918 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.6 pTM=0.446 ipTM=0.397 tol=8.02 2024-07-27 17:23:18,295 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.5 pTM=0.445 ipTM=0.405 tol=4.55 2024-07-27 17:23:46,665 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.6 pTM=0.446 ipTM=0.391 tol=6.86 2024-07-27 17:24:15,020 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.6 pTM=0.446 ipTM=0.413 tol=7.36 2024-07-27 17:24:43,374 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.7 pTM=0.446 ipTM=0.42 tol=3.74 2024-07-27 17:25:11,721 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.6 pTM=0.444 ipTM=0.377 tol=7.12 2024-07-27 17:25:40,081 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.8 pTM=0.446 ipTM=0.411 tol=4.17 2024-07-27 17:26:08,438 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.7 pTM=0.445 ipTM=0.379 tol=7.94 2024-07-27 17:26:36,783 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.7 pTM=0.447 ipTM=0.401 tol=11.1 2024-07-27 17:27:05,126 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.6 pTM=0.445 ipTM=0.379 tol=7.78 2024-07-27 17:27:33,442 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.7 pTM=0.446 ipTM=0.38 tol=4.98 2024-07-27 17:28:01,746 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.8 pTM=0.445 ipTM=0.369 tol=7.43 2024-07-27 17:28:30,053 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.8 pTM=0.447 ipTM=0.386 tol=5.61 2024-07-27 17:28:58,319 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.7 pTM=0.445 ipTM=0.37 tol=9.55 2024-07-27 17:29:26,577 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.7 pTM=0.447 ipTM=0.387 tol=10.9 2024-07-27 17:29:54,855 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44.6 pTM=0.445 ipTM=0.37 tol=11.9 2024-07-27 17:30:23,134 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45 pTM=0.447 ipTM=0.389 tol=9.02 2024-07-27 17:30:51,415 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=44.8 pTM=0.447 ipTM=0.38 tol=9.88 2024-07-27 17:31:19,742 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.8 pTM=0.448 ipTM=0.398 tol=6.47 2024-07-27 17:31:48,041 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=44.5 pTM=0.446 ipTM=0.365 tol=6.66 2024-07-27 17:32:16,321 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=44.7 pTM=0.447 ipTM=0.394 tol=4.71 2024-07-27 17:32:44,632 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=44.8 pTM=0.447 ipTM=0.375 tol=3.22 2024-07-27 17:33:12,938 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.9 pTM=0.449 ipTM=0.406 tol=5.19 2024-07-27 17:33:12,939 alphafold2_multimer_v3_model_4_seed_000 took 878.0s (30 recycles) 2024-07-27 17:33:41,943 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.5 pTM=0.443 ipTM=0.521 2024-07-27 17:34:10,263 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.7 pTM=0.441 ipTM=0.274 tol=14.5 2024-07-27 17:34:38,606 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.8 pTM=0.44 ipTM=0.238 tol=12.3 2024-07-27 17:35:06,939 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.1 pTM=0.445 ipTM=0.38 tol=9.41 2024-07-27 17:35:35,309 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.8 pTM=0.443 ipTM=0.299 tol=6.66 2024-07-27 17:36:03,696 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=45.5 pTM=0.446 ipTM=0.52 tol=5.54 2024-07-27 17:36:32,075 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.8 pTM=0.445 ipTM=0.55 tol=3.69 2024-07-27 17:37:00,445 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.7 pTM=0.445 ipTM=0.561 tol=5.02 2024-07-27 17:37:28,829 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=45.7 pTM=0.446 ipTM=0.515 tol=5.81 2024-07-27 17:37:57,210 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=45.2 pTM=0.448 ipTM=0.531 tol=8.26 2024-07-27 17:38:25,608 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.6 pTM=0.445 ipTM=0.541 tol=7.8 2024-07-27 17:38:53,968 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.5 pTM=0.444 ipTM=0.531 tol=6.51 2024-07-27 17:39:22,271 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.8 pTM=0.446 ipTM=0.531 tol=9.9 2024-07-27 17:39:50,584 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45.5 pTM=0.445 ipTM=0.524 tol=4.91 2024-07-27 17:40:18,940 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.2 pTM=0.444 ipTM=0.534 tol=8.8 2024-07-27 17:40:47,324 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45.4 pTM=0.442 ipTM=0.51 tol=5.71 2024-07-27 17:41:15,674 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.6 pTM=0.445 ipTM=0.521 tol=5.44 2024-07-27 17:41:44,061 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.5 pTM=0.444 ipTM=0.528 tol=3.7 2024-07-27 17:42:12,441 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.3 pTM=0.443 ipTM=0.532 tol=7.34 2024-07-27 17:42:40,826 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.4 pTM=0.445 ipTM=0.537 tol=5.77 2024-07-27 17:43:09,197 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.4 pTM=0.444 ipTM=0.507 tol=8.21 2024-07-27 17:43:37,580 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.4 pTM=0.446 ipTM=0.535 tol=4.66 2024-07-27 17:44:05,948 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.7 pTM=0.448 ipTM=0.554 tol=4.12 2024-07-27 17:44:34,323 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.7 pTM=0.449 ipTM=0.514 tol=4.18 2024-07-27 17:45:02,639 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.9 pTM=0.452 ipTM=0.551 tol=5.27 2024-07-27 17:45:30,967 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.5 pTM=0.446 ipTM=0.496 tol=5.93 2024-07-27 17:45:59,320 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.3 pTM=0.448 ipTM=0.546 tol=3.87 2024-07-27 17:46:27,644 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.9 pTM=0.454 ipTM=0.536 tol=6.58 2024-07-27 17:46:55,936 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46 pTM=0.457 ipTM=0.59 tol=5.7 2024-07-27 17:47:24,235 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.4 pTM=0.458 ipTM=0.559 tol=2.71 2024-07-27 17:47:52,556 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.1 pTM=0.457 ipTM=0.565 tol=5.73 2024-07-27 17:47:52,557 alphafold2_multimer_v3_model_5_seed_000 took 878.9s (30 recycles) 2024-07-27 17:47:53,297 reranking models by 'multimer' metric 2024-07-27 17:47:56,615 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 17:49:39,240 Relaxation took 105.9s 2024-07-27 17:49:39,240 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.8 pTM=0.444 ipTM=0.748 2024-07-27 17:51:35,148 Relaxation took 115.9s 2024-07-27 17:51:35,148 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.1 pTM=0.457 ipTM=0.565 2024-07-27 17:53:34,642 Relaxation took 119.5s 2024-07-27 17:53:34,642 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.8 pTM=0.452 ipTM=0.449 2024-07-27 17:55:29,286 Relaxation took 114.6s 2024-07-27 17:55:29,286 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.9 pTM=0.449 ipTM=0.406 2024-07-27 17:57:18,638 Relaxation took 109.4s 2024-07-27 17:57:18,638 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45 pTM=0.441 ipTM=0.389 2024-07-27 17:57:20,722 Done