2024-07-27 19:14:08,655 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 19:14:09,921 Running on GPU 2024-07-27 19:14:14,098 Found 6 citations for tools or databases 2024-07-27 19:14:14,098 Query 1/1: TFEB_FBXO44 (length 731) 2024-07-27 19:14:14,569 Sleeping for 9s. Reason: PENDING 2024-07-27 19:14:23,983 Sleeping for 7s. Reason: RUNNING 2024-07-27 19:14:31,407 Sleeping for 9s. Reason: RUNNING 2024-07-27 19:14:40,828 Sleeping for 9s. Reason: RUNNING 2024-07-27 19:14:50,264 Sleeping for 7s. Reason: RUNNING 2024-07-27 19:14:57,697 Sleeping for 6s. Reason: RUNNING 2024-07-27 19:15:05,835 Sleeping for 7s. Reason: PENDING 2024-07-27 19:15:13,263 Sleeping for 9s. Reason: RUNNING 2024-07-27 19:15:22,689 Sleeping for 10s. Reason: RUNNING 2024-07-27 19:15:33,121 Sleeping for 7s. Reason: RUNNING 2024-07-27 19:15:40,538 Sleeping for 7s. Reason: RUNNING 2024-07-27 19:15:51,206 Setting max_seq=508, max_extra_seq=2048 2024-07-27 19:19:59,115 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.4 pTM=0.401 ipTM=0.137 2024-07-27 19:20:13,448 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.7 pTM=0.44 ipTM=0.288 tol=9.77 2024-07-27 19:20:27,798 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.4 pTM=0.43 ipTM=0.261 tol=4.1 2024-07-27 19:20:42,161 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.3 pTM=0.432 ipTM=0.261 tol=3.15 2024-07-27 19:20:56,535 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.7 pTM=0.43 ipTM=0.247 tol=4.17 2024-07-27 19:21:10,918 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.6 pTM=0.431 ipTM=0.256 tol=2.32 2024-07-27 19:21:25,309 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.1 pTM=0.433 ipTM=0.262 tol=2.29 2024-07-27 19:21:39,707 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.8 pTM=0.432 ipTM=0.26 tol=1.4 2024-07-27 19:21:54,103 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.9 pTM=0.433 ipTM=0.264 tol=1.58 2024-07-27 19:22:08,506 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.8 pTM=0.432 ipTM=0.262 tol=3.77 2024-07-27 19:22:22,913 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.9 pTM=0.431 ipTM=0.268 tol=2.31 2024-07-27 19:22:37,320 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.8 pTM=0.43 ipTM=0.254 tol=2.51 2024-07-27 19:22:51,735 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.1 pTM=0.433 ipTM=0.264 tol=1.49 2024-07-27 19:23:06,155 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.9 pTM=0.432 ipTM=0.27 tol=1.48 2024-07-27 19:23:20,574 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.2 pTM=0.434 ipTM=0.279 tol=2.58 2024-07-27 19:23:34,988 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.2 pTM=0.437 ipTM=0.295 tol=2.31 2024-07-27 19:23:49,414 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.8 pTM=0.436 ipTM=0.29 tol=2.97 2024-07-27 19:24:03,836 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.8 pTM=0.438 ipTM=0.315 tol=2.46 2024-07-27 19:24:18,255 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.1 pTM=0.441 ipTM=0.331 tol=1.81 2024-07-27 19:24:32,670 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.6 pTM=0.443 ipTM=0.349 tol=3.64 2024-07-27 19:24:47,076 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.7 pTM=0.447 ipTM=0.378 tol=2.01 2024-07-27 19:25:01,490 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.5 pTM=0.44 ipTM=0.345 tol=1.92 2024-07-27 19:25:15,908 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.5 pTM=0.445 ipTM=0.374 tol=1.34 2024-07-27 19:25:30,325 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.4 pTM=0.438 ipTM=0.336 tol=2 2024-07-27 19:25:44,726 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.6 pTM=0.445 ipTM=0.371 tol=1.79 2024-07-27 19:25:59,136 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.2 pTM=0.437 ipTM=0.336 tol=2.11 2024-07-27 19:26:13,549 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.3 pTM=0.444 ipTM=0.37 tol=1.76 2024-07-27 19:26:27,965 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.2 pTM=0.438 ipTM=0.333 tol=1.98 2024-07-27 19:26:42,374 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55 pTM=0.44 ipTM=0.349 tol=1.63 2024-07-27 19:26:56,786 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.3 pTM=0.44 ipTM=0.347 tol=2.24 2024-07-27 19:27:11,197 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.2 pTM=0.441 ipTM=0.354 tol=1.56 2024-07-27 19:27:11,198 alphafold2_multimer_v3_model_1_seed_000 took 659.0s (30 recycles) 2024-07-27 19:27:26,160 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.9 pTM=0.39 ipTM=0.119 2024-07-27 19:27:40,637 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.1 pTM=0.396 ipTM=0.126 tol=8.48 2024-07-27 19:27:55,113 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.5 pTM=0.399 ipTM=0.13 tol=6.59 2024-07-27 19:28:09,585 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.8 pTM=0.398 ipTM=0.129 tol=4.46 2024-07-27 19:28:24,076 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.4 pTM=0.4 ipTM=0.13 tol=3.67 2024-07-27 19:28:38,566 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52 pTM=0.4 ipTM=0.131 tol=3.83 2024-07-27 19:28:53,052 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.6 pTM=0.401 ipTM=0.132 tol=4.19 2024-07-27 19:29:07,539 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.4 pTM=0.402 ipTM=0.134 tol=2.55 2024-07-27 19:29:22,021 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.6 pTM=0.401 ipTM=0.13 tol=2.79 2024-07-27 19:29:36,518 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.4 pTM=0.402 ipTM=0.133 tol=2.48 2024-07-27 19:29:51,009 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.7 pTM=0.402 ipTM=0.134 tol=2.31 2024-07-27 19:30:05,493 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.5 pTM=0.401 ipTM=0.135 tol=3.07 2024-07-27 19:30:19,995 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.6 pTM=0.403 ipTM=0.136 tol=3.26 2024-07-27 19:30:34,487 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.7 pTM=0.402 ipTM=0.135 tol=3.47 2024-07-27 19:30:48,982 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.7 pTM=0.401 ipTM=0.135 tol=3.84 2024-07-27 19:31:03,475 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.5 pTM=0.402 ipTM=0.134 tol=3.52 2024-07-27 19:31:17,961 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.4 pTM=0.403 ipTM=0.134 tol=4.17 2024-07-27 19:31:32,461 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.6 pTM=0.403 ipTM=0.137 tol=3.36 2024-07-27 19:31:46,953 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.7 pTM=0.404 ipTM=0.138 tol=4.21 2024-07-27 19:32:01,448 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.9 pTM=0.403 ipTM=0.136 tol=4.19 2024-07-27 19:32:15,939 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.7 pTM=0.402 ipTM=0.135 tol=4.12 2024-07-27 19:32:30,435 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.9 pTM=0.401 ipTM=0.135 tol=3.64 2024-07-27 19:32:44,931 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.5 pTM=0.401 ipTM=0.132 tol=4.51 2024-07-27 19:32:59,437 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.8 pTM=0.402 ipTM=0.135 tol=5.36 2024-07-27 19:33:13,932 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.7 pTM=0.402 ipTM=0.133 tol=3.68 2024-07-27 19:33:28,425 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.9 pTM=0.402 ipTM=0.135 tol=3.15 2024-07-27 19:33:42,920 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.3 pTM=0.4 ipTM=0.133 tol=4 2024-07-27 19:33:57,425 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.8 pTM=0.401 ipTM=0.133 tol=4.26 2024-07-27 19:34:11,925 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.4 pTM=0.402 ipTM=0.133 tol=4.23 2024-07-27 19:34:26,421 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.6 pTM=0.4 ipTM=0.133 tol=5.71 2024-07-27 19:34:40,906 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.1 pTM=0.402 ipTM=0.135 tol=6.11 2024-07-27 19:34:40,907 alphafold2_multimer_v3_model_2_seed_000 took 449.2s (30 recycles) 2024-07-27 19:34:55,979 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.5 pTM=0.391 ipTM=0.122 2024-07-27 19:35:10,510 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.2 pTM=0.43 ipTM=0.345 tol=26.6 2024-07-27 19:35:25,024 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.5 pTM=0.449 ipTM=0.438 tol=16.3 2024-07-27 19:35:39,516 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.9 pTM=0.43 ipTM=0.335 tol=6.69 2024-07-27 19:35:54,013 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.4 pTM=0.429 ipTM=0.334 tol=3.62 2024-07-27 19:36:08,509 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.1 pTM=0.436 ipTM=0.382 tol=3.14 2024-07-27 19:36:23,015 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.2 pTM=0.433 ipTM=0.343 tol=2.51 2024-07-27 19:36:37,520 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54 pTM=0.434 ipTM=0.365 tol=1.7 2024-07-27 19:36:52,022 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.3 pTM=0.435 ipTM=0.375 tol=2.87 2024-07-27 19:37:06,532 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.3 pTM=0.434 ipTM=0.369 tol=2.01 2024-07-27 19:37:21,034 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54 pTM=0.432 ipTM=0.359 tol=1.88 2024-07-27 19:37:35,535 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.2 pTM=0.433 ipTM=0.379 tol=2.07 2024-07-27 19:37:50,035 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.2 pTM=0.436 ipTM=0.377 tol=2.72 2024-07-27 19:38:04,531 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.8 pTM=0.442 ipTM=0.392 tol=2.18 2024-07-27 19:38:19,031 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55.6 pTM=0.453 ipTM=0.435 tol=2.54 2024-07-27 19:38:33,532 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.4 pTM=0.45 ipTM=0.412 tol=1.71 2024-07-27 19:38:48,027 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.1 pTM=0.459 ipTM=0.453 tol=2.09 2024-07-27 19:39:02,515 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.7 pTM=0.452 ipTM=0.41 tol=1.64 2024-07-27 19:39:17,012 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.1 pTM=0.461 ipTM=0.456 tol=1.31 2024-07-27 19:39:31,502 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.2 pTM=0.464 ipTM=0.473 tol=1.35 2024-07-27 19:39:46,001 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56 pTM=0.46 ipTM=0.45 tol=1.04 2024-07-27 19:40:00,492 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.8 pTM=0.458 ipTM=0.431 tol=1.51 2024-07-27 19:40:14,978 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56 pTM=0.461 ipTM=0.463 tol=1.46 2024-07-27 19:40:29,474 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.8 pTM=0.455 ipTM=0.428 tol=1.82 2024-07-27 19:40:43,963 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.1 pTM=0.463 ipTM=0.457 tol=1.51 2024-07-27 19:40:58,446 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.6 pTM=0.452 ipTM=0.417 tol=1.86 2024-07-27 19:41:12,930 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.1 pTM=0.463 ipTM=0.466 tol=1.82 2024-07-27 19:41:27,415 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.6 pTM=0.453 ipTM=0.414 tol=2.08 2024-07-27 19:41:41,904 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.2 pTM=0.469 ipTM=0.49 tol=2.04 2024-07-27 19:41:56,393 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56 pTM=0.462 ipTM=0.459 tol=1.87 2024-07-27 19:42:10,884 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.2 pTM=0.466 ipTM=0.48 tol=2.27 2024-07-27 19:42:10,885 alphafold2_multimer_v3_model_3_seed_000 took 449.5s (30 recycles) 2024-07-27 19:42:25,968 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49 pTM=0.383 ipTM=0.12 2024-07-27 19:42:40,546 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.2 pTM=0.396 ipTM=0.137 tol=23.9 2024-07-27 19:42:55,068 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.5 pTM=0.397 ipTM=0.136 tol=11.6 2024-07-27 19:43:09,596 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.4 pTM=0.397 ipTM=0.141 tol=7.65 2024-07-27 19:43:24,125 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.6 pTM=0.397 ipTM=0.138 tol=3.26 2024-07-27 19:43:38,655 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.8 pTM=0.396 ipTM=0.144 tol=3.96 2024-07-27 19:43:53,189 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.7 pTM=0.397 ipTM=0.137 tol=3.35 2024-07-27 19:44:07,728 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.6 pTM=0.396 ipTM=0.149 tol=4.66 2024-07-27 19:44:22,259 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.3 pTM=0.397 ipTM=0.15 tol=3.16 2024-07-27 19:44:36,796 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.4 pTM=0.394 ipTM=0.136 tol=5.23 2024-07-27 19:44:51,335 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.2 pTM=0.396 ipTM=0.151 tol=7.13 2024-07-27 19:45:05,882 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.1 pTM=0.395 ipTM=0.14 tol=5.67 2024-07-27 19:45:20,435 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48 pTM=0.396 ipTM=0.141 tol=5.3 2024-07-27 19:45:34,989 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48 pTM=0.393 ipTM=0.131 tol=5.41 2024-07-27 19:45:49,547 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48 pTM=0.394 ipTM=0.13 tol=3.84 2024-07-27 19:46:04,115 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.2 pTM=0.394 ipTM=0.128 tol=3.94 2024-07-27 19:46:18,676 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.2 pTM=0.393 ipTM=0.127 tol=4.34 2024-07-27 19:46:33,236 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.3 pTM=0.395 ipTM=0.134 tol=3.23 2024-07-27 19:46:47,794 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.3 pTM=0.395 ipTM=0.13 tol=2.99 2024-07-27 19:47:02,342 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.2 pTM=0.395 ipTM=0.13 tol=2.74 2024-07-27 19:47:16,892 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.6 pTM=0.396 ipTM=0.141 tol=3.66 2024-07-27 19:47:31,435 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.3 pTM=0.395 ipTM=0.127 tol=2.58 2024-07-27 19:47:45,978 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.3 pTM=0.397 ipTM=0.129 tol=4.07 2024-07-27 19:48:00,518 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.2 pTM=0.397 ipTM=0.131 tol=4.14 2024-07-27 19:48:15,062 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.2 pTM=0.397 ipTM=0.135 tol=2.23 2024-07-27 19:48:29,606 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.2 pTM=0.398 ipTM=0.14 tol=2.38 2024-07-27 19:48:44,156 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.2 pTM=0.399 ipTM=0.139 tol=3.21 2024-07-27 19:48:58,701 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.2 pTM=0.401 ipTM=0.136 tol=4.84 2024-07-27 19:49:13,247 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.1 pTM=0.397 ipTM=0.132 tol=3.48 2024-07-27 19:49:27,808 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.3 pTM=0.396 ipTM=0.132 tol=3.02 2024-07-27 19:49:42,364 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.3 pTM=0.398 ipTM=0.135 tol=2.24 2024-07-27 19:49:42,365 alphafold2_multimer_v3_model_4_seed_000 took 451.0s (30 recycles) 2024-07-27 19:49:57,492 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.1 pTM=0.385 ipTM=0.147 2024-07-27 19:50:12,084 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.1 pTM=0.394 ipTM=0.133 tol=22 2024-07-27 19:50:26,636 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.7 pTM=0.395 ipTM=0.137 tol=12.3 2024-07-27 19:50:41,191 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50 pTM=0.395 ipTM=0.141 tol=6.92 2024-07-27 19:50:55,739 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.2 pTM=0.396 ipTM=0.134 tol=5.48 2024-07-27 19:51:10,287 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50 pTM=0.395 ipTM=0.137 tol=5.82 2024-07-27 19:51:24,817 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.4 pTM=0.399 ipTM=0.146 tol=9.3 2024-07-27 19:51:39,363 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.5 pTM=0.397 ipTM=0.134 tol=7 2024-07-27 19:51:53,902 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.4 pTM=0.398 ipTM=0.134 tol=3.74 2024-07-27 19:52:08,460 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.6 pTM=0.398 ipTM=0.147 tol=6.02 2024-07-27 19:52:22,998 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.6 pTM=0.398 ipTM=0.142 tol=5.82 2024-07-27 19:52:37,548 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.4 pTM=0.394 ipTM=0.137 tol=6.29 2024-07-27 19:52:52,087 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.4 pTM=0.397 ipTM=0.141 tol=6.12 2024-07-27 19:53:06,636 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.4 pTM=0.394 ipTM=0.135 tol=7.1 2024-07-27 19:53:21,178 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.7 pTM=0.395 ipTM=0.141 tol=5.73 2024-07-27 19:53:35,722 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.3 pTM=0.395 ipTM=0.138 tol=4.52 2024-07-27 19:53:50,260 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.4 pTM=0.395 ipTM=0.14 tol=4.5 2024-07-27 19:54:04,805 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50 pTM=0.396 ipTM=0.138 tol=3.31 2024-07-27 19:54:19,344 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.7 pTM=0.397 ipTM=0.139 tol=6.29 2024-07-27 19:54:33,901 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50.5 pTM=0.396 ipTM=0.134 tol=6.82 2024-07-27 19:54:48,432 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.7 pTM=0.397 ipTM=0.143 tol=4.56 2024-07-27 19:55:02,982 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.5 pTM=0.394 ipTM=0.132 tol=4.5 2024-07-27 19:55:17,525 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.6 pTM=0.396 ipTM=0.137 tol=3.39 2024-07-27 19:55:32,073 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.8 pTM=0.395 ipTM=0.141 tol=3.87 2024-07-27 19:55:46,613 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.6 pTM=0.396 ipTM=0.14 tol=4.7 2024-07-27 19:56:01,173 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.1 pTM=0.393 ipTM=0.135 tol=4.38 2024-07-27 19:56:15,714 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.7 pTM=0.395 ipTM=0.137 tol=5.79 2024-07-27 19:56:30,260 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.5 pTM=0.397 ipTM=0.152 tol=6.36 2024-07-27 19:56:44,797 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50 pTM=0.395 ipTM=0.14 tol=3.96 2024-07-27 19:56:59,347 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.6 pTM=0.395 ipTM=0.14 tol=4.23 2024-07-27 19:57:13,891 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.8 pTM=0.396 ipTM=0.141 tol=4.77 2024-07-27 19:57:13,892 alphafold2_multimer_v3_model_5_seed_000 took 451.0s (30 recycles) 2024-07-27 19:57:14,395 reranking models by 'multimer' metric 2024-07-27 19:57:17,674 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 19:58:20,501 Relaxation took 66.1s 2024-07-27 19:58:20,501 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.2 pTM=0.466 ipTM=0.48 2024-07-27 19:58:46,262 Relaxation took 25.8s 2024-07-27 19:58:46,262 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.2 pTM=0.441 ipTM=0.354 2024-07-27 19:59:54,400 Relaxation took 68.1s 2024-07-27 19:59:54,400 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.8 pTM=0.396 ipTM=0.141 2024-07-27 20:00:57,424 Relaxation took 63.0s 2024-07-27 20:00:57,425 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.1 pTM=0.402 ipTM=0.135 2024-07-27 20:02:32,666 Relaxation took 95.2s 2024-07-27 20:02:32,666 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.3 pTM=0.398 ipTM=0.135 2024-07-27 20:02:34,646 Done