2024-07-27 20:08:08,565 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 20:08:08,929 Running on GPU 2024-07-27 20:08:11,745 Found 6 citations for tools or databases 2024-07-27 20:08:11,745 Query 1/1: TGIF1_GPS1 (length 892) 2024-07-27 20:08:12,379 Sleeping for 9s. Reason: PENDING 2024-07-27 20:08:21,810 Sleeping for 9s. Reason: RUNNING 2024-07-27 20:08:31,280 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:08:39,689 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:08:48,132 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:08:56,555 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:09:06,990 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:09:20,204 Sleeping for 5s. Reason: PENDING 2024-07-27 20:09:25,648 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:09:36,093 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:09:43,510 Sleeping for 5s. Reason: RUNNING 2024-07-27 20:09:48,935 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:09:59,385 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:10:09,430 Setting max_seq=508, max_extra_seq=2048 2024-07-27 20:13:26,894 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.2 pTM=0.476 ipTM=0.15 2024-07-27 20:13:47,378 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.2 pTM=0.48 ipTM=0.151 tol=12.2 2024-07-27 20:14:07,881 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.3 pTM=0.48 ipTM=0.138 tol=8.28 2024-07-27 20:14:28,469 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.8 pTM=0.481 ipTM=0.142 tol=5.64 2024-07-27 20:14:49,075 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.7 pTM=0.48 ipTM=0.136 tol=3.71 2024-07-27 20:15:09,717 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.8 pTM=0.48 ipTM=0.134 tol=5.55 2024-07-27 20:15:30,340 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.8 pTM=0.479 ipTM=0.136 tol=5.42 2024-07-27 20:15:50,952 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.9 pTM=0.48 ipTM=0.135 tol=5.68 2024-07-27 20:16:11,587 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.9 pTM=0.48 ipTM=0.134 tol=3.62 2024-07-27 20:16:32,211 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.8 pTM=0.481 ipTM=0.137 tol=4.17 2024-07-27 20:16:52,838 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.9 pTM=0.481 ipTM=0.137 tol=4.18 2024-07-27 20:17:13,460 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.9 pTM=0.482 ipTM=0.138 tol=4.39 2024-07-27 20:17:34,084 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.1 pTM=0.482 ipTM=0.138 tol=3.77 2024-07-27 20:17:54,710 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57.9 pTM=0.481 ipTM=0.136 tol=5.15 2024-07-27 20:18:15,333 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.1 pTM=0.482 ipTM=0.135 tol=5.04 2024-07-27 20:18:35,955 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.8 pTM=0.481 ipTM=0.137 tol=4.89 2024-07-27 20:18:56,634 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58 pTM=0.481 ipTM=0.134 tol=4.4 2024-07-27 20:19:17,270 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.8 pTM=0.482 ipTM=0.136 tol=4.23 2024-07-27 20:19:37,886 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.9 pTM=0.481 ipTM=0.135 tol=3.76 2024-07-27 20:19:58,509 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.1 pTM=0.482 ipTM=0.134 tol=3.6 2024-07-27 20:20:19,140 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.8 pTM=0.482 ipTM=0.135 tol=4 2024-07-27 20:20:39,777 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58 pTM=0.482 ipTM=0.136 tol=4.11 2024-07-27 20:21:00,400 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.7 pTM=0.481 ipTM=0.137 tol=4.24 2024-07-27 20:21:21,019 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.3 pTM=0.48 ipTM=0.135 tol=10 2024-07-27 20:21:41,626 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.7 pTM=0.481 ipTM=0.139 tol=6.54 2024-07-27 20:22:02,248 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.8 pTM=0.482 ipTM=0.138 tol=3.72 2024-07-27 20:22:22,861 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.8 pTM=0.48 ipTM=0.134 tol=3.62 2024-07-27 20:22:43,480 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.8 pTM=0.481 ipTM=0.135 tol=2.95 2024-07-27 20:23:04,093 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.8 pTM=0.48 ipTM=0.134 tol=2.24 2024-07-27 20:23:24,705 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.7 pTM=0.48 ipTM=0.133 tol=3.88 2024-07-27 20:23:45,315 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.5 pTM=0.479 ipTM=0.136 tol=2.88 2024-07-27 20:23:45,316 alphafold2_multimer_v3_model_1_seed_000 took 809.8s (30 recycles) 2024-07-27 20:24:06,587 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.6 pTM=0.477 ipTM=0.125 2024-07-27 20:24:27,222 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.6 pTM=0.482 ipTM=0.14 tol=19 2024-07-27 20:24:47,883 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.7 pTM=0.481 ipTM=0.138 tol=9.06 2024-07-27 20:25:08,565 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.8 pTM=0.484 ipTM=0.138 tol=10.9 2024-07-27 20:25:29,247 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.6 pTM=0.483 ipTM=0.132 tol=9.34 2024-07-27 20:25:49,915 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58 pTM=0.482 ipTM=0.139 tol=6.23 2024-07-27 20:26:10,575 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.7 pTM=0.481 ipTM=0.137 tol=3.98 2024-07-27 20:26:31,256 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.5 pTM=0.483 ipTM=0.136 tol=5.71 2024-07-27 20:26:51,932 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.9 pTM=0.481 ipTM=0.135 tol=5.9 2024-07-27 20:27:12,601 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.6 pTM=0.481 ipTM=0.136 tol=7.81 2024-07-27 20:27:33,280 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.7 pTM=0.482 ipTM=0.137 tol=7.33 2024-07-27 20:27:53,959 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.8 pTM=0.481 ipTM=0.137 tol=6.85 2024-07-27 20:28:14,646 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.8 pTM=0.482 ipTM=0.136 tol=5.26 2024-07-27 20:28:35,340 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.8 pTM=0.482 ipTM=0.138 tol=6.83 2024-07-27 20:28:56,032 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.7 pTM=0.481 ipTM=0.135 tol=5.94 2024-07-27 20:29:16,716 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.7 pTM=0.481 ipTM=0.134 tol=5.39 2024-07-27 20:29:37,400 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.7 pTM=0.481 ipTM=0.136 tol=9.19 2024-07-27 20:29:58,101 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.7 pTM=0.483 ipTM=0.136 tol=7.07 2024-07-27 20:30:18,780 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.8 pTM=0.481 ipTM=0.131 tol=6.03 2024-07-27 20:30:39,432 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.5 pTM=0.482 ipTM=0.135 tol=6.2 2024-07-27 20:31:00,113 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.7 pTM=0.481 ipTM=0.136 tol=4.91 2024-07-27 20:31:20,775 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.8 pTM=0.481 ipTM=0.134 tol=5.99 2024-07-27 20:31:41,455 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.6 pTM=0.482 ipTM=0.138 tol=4.96 2024-07-27 20:32:02,122 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.8 pTM=0.48 ipTM=0.134 tol=5.59 2024-07-27 20:32:22,799 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.6 pTM=0.481 ipTM=0.134 tol=3.79 2024-07-27 20:32:43,466 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.7 pTM=0.482 ipTM=0.134 tol=4.14 2024-07-27 20:33:04,151 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.8 pTM=0.481 ipTM=0.135 tol=5.16 2024-07-27 20:33:24,824 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.8 pTM=0.48 ipTM=0.134 tol=3.51 2024-07-27 20:33:45,504 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.7 pTM=0.48 ipTM=0.136 tol=3.14 2024-07-27 20:34:06,169 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.6 pTM=0.481 ipTM=0.133 tol=3.09 2024-07-27 20:34:26,857 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.7 pTM=0.481 ipTM=0.137 tol=5.35 2024-07-27 20:34:26,858 alphafold2_multimer_v3_model_2_seed_000 took 640.9s (30 recycles) 2024-07-27 20:34:48,178 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.5 pTM=0.49 ipTM=0.151 2024-07-27 20:35:08,839 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.2 pTM=0.49 ipTM=0.145 tol=14.8 2024-07-27 20:35:29,531 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.3 pTM=0.489 ipTM=0.159 tol=12.9 2024-07-27 20:35:50,250 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.6 pTM=0.491 ipTM=0.141 tol=5.09 2024-07-27 20:36:11,006 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.2 pTM=0.489 ipTM=0.131 tol=7.03 2024-07-27 20:36:31,771 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.3 pTM=0.487 ipTM=0.13 tol=6.48 2024-07-27 20:36:52,519 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.2 pTM=0.488 ipTM=0.135 tol=3.72 2024-07-27 20:37:13,257 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.2 pTM=0.486 ipTM=0.131 tol=3.39 2024-07-27 20:37:33,982 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.2 pTM=0.488 ipTM=0.134 tol=3.11 2024-07-27 20:37:54,710 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58 pTM=0.486 ipTM=0.131 tol=2.85 2024-07-27 20:38:15,430 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.3 pTM=0.488 ipTM=0.135 tol=2.96 2024-07-27 20:38:36,177 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.2 pTM=0.487 ipTM=0.133 tol=3.26 2024-07-27 20:38:56,910 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.2 pTM=0.487 ipTM=0.134 tol=2.46 2024-07-27 20:39:17,653 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.4 pTM=0.489 ipTM=0.134 tol=2.9 2024-07-27 20:39:38,378 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.1 pTM=0.486 ipTM=0.131 tol=5.1 2024-07-27 20:39:59,093 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.3 pTM=0.489 ipTM=0.134 tol=5.85 2024-07-27 20:40:19,782 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.2 pTM=0.488 ipTM=0.132 tol=3.09 2024-07-27 20:40:40,508 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58 pTM=0.488 ipTM=0.133 tol=3.55 2024-07-27 20:41:01,311 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.2 pTM=0.489 ipTM=0.135 tol=3.51 2024-07-27 20:41:22,139 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.4 pTM=0.489 ipTM=0.133 tol=3.23 2024-07-27 20:41:42,944 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.4 pTM=0.49 ipTM=0.135 tol=5.82 2024-07-27 20:42:03,715 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.5 pTM=0.489 ipTM=0.132 tol=4.95 2024-07-27 20:42:24,541 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.2 pTM=0.491 ipTM=0.135 tol=5.72 2024-07-27 20:42:45,344 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.2 pTM=0.488 ipTM=0.132 tol=5.7 2024-07-27 20:43:06,085 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.4 pTM=0.49 ipTM=0.135 tol=3.37 2024-07-27 20:43:26,838 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.2 pTM=0.489 ipTM=0.133 tol=4.21 2024-07-27 20:43:47,596 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.2 pTM=0.489 ipTM=0.134 tol=8.13 2024-07-27 20:44:08,326 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.3 pTM=0.488 ipTM=0.134 tol=5.21 2024-07-27 20:44:29,038 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.1 pTM=0.487 ipTM=0.134 tol=2.24 2024-07-27 20:44:49,759 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.3 pTM=0.49 ipTM=0.133 tol=2.66 2024-07-27 20:45:10,483 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.2 pTM=0.488 ipTM=0.133 tol=2.68 2024-07-27 20:45:10,484 alphafold2_multimer_v3_model_3_seed_000 took 643.0s (30 recycles) 2024-07-27 20:45:31,907 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.2 pTM=0.496 ipTM=0.213 2024-07-27 20:45:52,680 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.6 pTM=0.483 ipTM=0.148 tol=15.3 2024-07-27 20:46:13,468 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.5 pTM=0.483 ipTM=0.141 tol=8.52 2024-07-27 20:46:34,272 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57 pTM=0.485 ipTM=0.166 tol=12.1 2024-07-27 20:46:55,058 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.2 pTM=0.479 ipTM=0.138 tol=6.13 2024-07-27 20:47:15,842 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.8 pTM=0.483 ipTM=0.152 tol=5.36 2024-07-27 20:47:36,630 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.8 pTM=0.48 ipTM=0.14 tol=6.56 2024-07-27 20:47:57,389 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.483 ipTM=0.149 tol=6.28 2024-07-27 20:48:18,163 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57 pTM=0.48 ipTM=0.14 tol=6.04 2024-07-27 20:48:38,933 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.8 pTM=0.484 ipTM=0.16 tol=4.57 2024-07-27 20:48:59,733 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.7 pTM=0.482 ipTM=0.143 tol=8.56 2024-07-27 20:49:20,557 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.7 pTM=0.484 ipTM=0.145 tol=9.3 2024-07-27 20:49:41,324 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.1 pTM=0.488 ipTM=0.184 tol=7.51 2024-07-27 20:50:02,095 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.8 pTM=0.479 ipTM=0.137 tol=6.37 2024-07-27 20:50:22,874 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.6 pTM=0.485 ipTM=0.153 tol=7.58 2024-07-27 20:50:43,707 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.1 pTM=0.482 ipTM=0.145 tol=5.74 2024-07-27 20:51:04,484 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.8 pTM=0.485 ipTM=0.171 tol=4.56 2024-07-27 20:51:25,312 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57 pTM=0.481 ipTM=0.139 tol=5.26 2024-07-27 20:51:46,118 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.8 pTM=0.486 ipTM=0.163 tol=6.01 2024-07-27 20:52:06,933 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.3 pTM=0.48 ipTM=0.138 tol=6.29 2024-07-27 20:52:27,726 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.6 pTM=0.484 ipTM=0.153 tol=6.07 2024-07-27 20:52:48,501 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.1 pTM=0.481 ipTM=0.142 tol=3.5 2024-07-27 20:53:09,266 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.9 pTM=0.483 ipTM=0.152 tol=2.22 2024-07-27 20:53:30,021 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.9 pTM=0.48 ipTM=0.146 tol=4.87 2024-07-27 20:53:50,796 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.9 pTM=0.484 ipTM=0.161 tol=4.26 2024-07-27 20:54:11,602 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.1 pTM=0.483 ipTM=0.142 tol=4.75 2024-07-27 20:54:32,376 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.9 pTM=0.486 ipTM=0.167 tol=5.32 2024-07-27 20:54:53,151 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.1 pTM=0.479 ipTM=0.135 tol=4.2 2024-07-27 20:55:13,908 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.7 pTM=0.483 ipTM=0.158 tol=4.89 2024-07-27 20:55:34,669 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.1 pTM=0.479 ipTM=0.139 tol=5.7 2024-07-27 20:55:55,442 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.7 pTM=0.484 ipTM=0.165 tol=5.23 2024-07-27 20:55:55,443 alphafold2_multimer_v3_model_4_seed_000 took 644.3s (30 recycles) 2024-07-27 20:56:16,899 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.8 pTM=0.481 ipTM=0.126 2024-07-27 20:56:37,691 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.7 pTM=0.483 ipTM=0.123 tol=11.2 2024-07-27 20:56:58,470 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.9 pTM=0.483 ipTM=0.123 tol=6.18 2024-07-27 20:57:19,266 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.3 pTM=0.485 ipTM=0.129 tol=6.61 2024-07-27 20:57:40,038 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.3 pTM=0.484 ipTM=0.123 tol=7.43 2024-07-27 20:58:00,825 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.3 pTM=0.483 ipTM=0.121 tol=7.31 2024-07-27 20:58:21,588 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.4 pTM=0.484 ipTM=0.123 tol=7.74 2024-07-27 20:58:42,342 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.4 pTM=0.483 ipTM=0.124 tol=4.98 2024-07-27 20:59:03,086 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.3 pTM=0.483 ipTM=0.124 tol=5.7 2024-07-27 20:59:23,840 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.2 pTM=0.483 ipTM=0.124 tol=3.89 2024-07-27 20:59:44,595 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.6 pTM=0.483 ipTM=0.124 tol=4.48 2024-07-27 21:00:05,345 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.4 pTM=0.484 ipTM=0.126 tol=8.89 2024-07-27 21:00:26,080 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.6 pTM=0.485 ipTM=0.125 tol=10.8 2024-07-27 21:00:46,833 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.5 pTM=0.485 ipTM=0.125 tol=10.3 2024-07-27 21:01:07,597 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.6 pTM=0.485 ipTM=0.125 tol=4.86 2024-07-27 21:01:28,368 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.5 pTM=0.485 ipTM=0.127 tol=6.38 2024-07-27 21:01:49,133 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.6 pTM=0.485 ipTM=0.128 tol=3.97 2024-07-27 21:02:09,903 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.5 pTM=0.485 ipTM=0.128 tol=4.9 2024-07-27 21:02:30,659 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.5 pTM=0.485 ipTM=0.126 tol=4.02 2024-07-27 21:02:51,434 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.6 pTM=0.485 ipTM=0.127 tol=3.09 2024-07-27 21:03:12,199 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.4 pTM=0.484 ipTM=0.128 tol=4.38 2024-07-27 21:03:32,955 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.6 pTM=0.484 ipTM=0.123 tol=4.79 2024-07-27 21:03:53,709 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.5 pTM=0.484 ipTM=0.123 tol=3.1 2024-07-27 21:04:14,454 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.6 pTM=0.484 ipTM=0.125 tol=3.79 2024-07-27 21:04:35,201 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.5 pTM=0.484 ipTM=0.126 tol=6.12 2024-07-27 21:04:55,947 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.5 pTM=0.485 ipTM=0.125 tol=6.44 2024-07-27 21:05:16,696 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.5 pTM=0.485 ipTM=0.127 tol=4.73 2024-07-27 21:05:37,439 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.5 pTM=0.484 ipTM=0.124 tol=2.27 2024-07-27 21:05:58,199 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.5 pTM=0.484 ipTM=0.123 tol=2.59 2024-07-27 21:06:18,950 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.5 pTM=0.484 ipTM=0.122 tol=5.71 2024-07-27 21:06:39,703 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.4 pTM=0.484 ipTM=0.124 tol=5.34 2024-07-27 21:06:39,704 alphafold2_multimer_v3_model_5_seed_000 took 643.6s (30 recycles) 2024-07-27 21:06:40,332 reranking models by 'multimer' metric 2024-07-27 21:06:43,777 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 21:07:40,858 Relaxation took 60.5s 2024-07-27 21:07:40,858 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.7 pTM=0.484 ipTM=0.165 2024-07-27 21:08:45,580 Relaxation took 64.7s 2024-07-27 21:08:45,580 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.7 pTM=0.481 ipTM=0.137 2024-07-27 21:09:54,206 Relaxation took 68.6s 2024-07-27 21:09:54,207 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.5 pTM=0.479 ipTM=0.136 2024-07-27 21:11:01,342 Relaxation took 67.1s 2024-07-27 21:11:01,342 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.2 pTM=0.488 ipTM=0.133 2024-07-27 21:12:16,597 Relaxation took 75.3s 2024-07-27 21:12:16,598 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.4 pTM=0.484 ipTM=0.124 2024-07-27 21:12:18,471 Done