2024-07-27 20:35:59,925 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 20:36:00,244 Running on GPU 2024-07-27 20:36:03,853 Found 6 citations for tools or databases 2024-07-27 20:36:03,853 Query 1/1: THAP10_KBTBD2 (length 880) 2024-07-27 20:36:04,322 Sleeping for 8s. Reason: PENDING 2024-07-27 20:36:12,749 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:36:20,190 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:36:27,619 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:36:34,054 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:36:40,480 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:36:48,945 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:36:57,365 Sleeping for 5s. Reason: RUNNING 2024-07-27 20:37:02,792 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:37:09,245 Sleeping for 5s. Reason: RUNNING 2024-07-27 20:37:14,672 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:37:22,115 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:37:30,084 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:37:36,502 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:37:43,326 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:37:53,753 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:38:02,184 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:38:17,779 Sleeping for 10s. Reason: PENDING 2024-07-27 20:38:28,242 Sleeping for 8s. Reason: RUNNING 2024-07-27 20:38:36,681 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:38:47,154 Sleeping for 5s. Reason: RUNNING 2024-07-27 20:38:52,583 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:39:03,037 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:39:09,464 Sleeping for 9s. Reason: RUNNING 2024-07-27 20:39:18,883 Sleeping for 6s. Reason: RUNNING 2024-07-27 20:39:25,301 Sleeping for 7s. Reason: RUNNING 2024-07-27 20:39:32,749 Sleeping for 5s. Reason: RUNNING 2024-07-27 20:39:38,204 Sleeping for 10s. Reason: RUNNING 2024-07-27 20:39:51,286 Setting max_seq=508, max_extra_seq=2048 2024-07-27 20:42:17,449 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.1 pTM=0.598 ipTM=0.144 2024-07-27 20:42:31,756 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.6 pTM=0.613 ipTM=0.143 tol=7.77 2024-07-27 20:42:46,076 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.9 pTM=0.607 ipTM=0.146 tol=3.78 2024-07-27 20:43:00,418 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.9 pTM=0.602 ipTM=0.14 tol=2.67 2024-07-27 20:43:14,765 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67 pTM=0.598 ipTM=0.131 tol=2.83 2024-07-27 20:43:29,145 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.9 pTM=0.596 ipTM=0.139 tol=4.5 2024-07-27 20:43:43,535 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.2 pTM=0.596 ipTM=0.153 tol=3.94 2024-07-27 20:43:57,926 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.4 pTM=0.603 ipTM=0.181 tol=2.94 2024-07-27 20:44:12,328 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.8 pTM=0.608 ipTM=0.19 tol=2.12 2024-07-27 20:44:26,735 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.6 pTM=0.607 ipTM=0.187 tol=1.88 2024-07-27 20:44:41,165 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.6 pTM=0.61 ipTM=0.177 tol=3.66 2024-07-27 20:44:55,581 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.5 pTM=0.606 ipTM=0.168 tol=1.97 2024-07-27 20:45:09,997 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.4 pTM=0.607 ipTM=0.167 tol=2.36 2024-07-27 20:45:24,446 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.4 pTM=0.607 ipTM=0.164 tol=1.36 2024-07-27 20:45:38,894 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.6 pTM=0.61 ipTM=0.182 tol=2.04 2024-07-27 20:45:53,338 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.5 pTM=0.612 ipTM=0.179 tol=1.9 2024-07-27 20:46:07,773 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.4 pTM=0.61 ipTM=0.183 tol=1.66 2024-07-27 20:46:22,230 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.2 pTM=0.608 ipTM=0.188 tol=1.56 2024-07-27 20:46:36,676 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.1 pTM=0.615 ipTM=0.205 tol=1.73 2024-07-27 20:46:51,095 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.6 pTM=0.611 ipTM=0.182 tol=1.9 2024-07-27 20:47:05,516 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.1 pTM=0.604 ipTM=0.161 tol=2.33 2024-07-27 20:47:19,953 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.1 pTM=0.605 ipTM=0.157 tol=2.01 2024-07-27 20:47:34,404 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.7 pTM=0.609 ipTM=0.167 tol=2.35 2024-07-27 20:47:48,864 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.1 pTM=0.609 ipTM=0.15 tol=2.02 2024-07-27 20:48:03,312 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.1 pTM=0.607 ipTM=0.158 tol=2.18 2024-07-27 20:48:17,771 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.2 pTM=0.605 ipTM=0.164 tol=1.74 2024-07-27 20:48:32,224 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.4 pTM=0.608 ipTM=0.18 tol=1.81 2024-07-27 20:48:46,670 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.4 pTM=0.609 ipTM=0.184 tol=1.54 2024-07-27 20:49:01,102 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.4 pTM=0.609 ipTM=0.179 tol=1.15 2024-07-27 20:49:15,558 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.9 pTM=0.603 ipTM=0.148 tol=3.04 2024-07-27 20:49:29,986 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.2 pTM=0.604 ipTM=0.166 tol=2.04 2024-07-27 20:49:29,986 alphafold2_multimer_v3_model_1_seed_000 took 573.9s (30 recycles) 2024-07-27 20:49:44,928 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.2 pTM=0.578 ipTM=0.136 2024-07-27 20:49:59,407 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=68.2 pTM=0.628 ipTM=0.238 tol=12.8 2024-07-27 20:50:13,870 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.9 pTM=0.618 ipTM=0.231 tol=8.8 2024-07-27 20:50:28,327 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.5 pTM=0.606 ipTM=0.199 tol=3.46 2024-07-27 20:50:42,793 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.8 pTM=0.604 ipTM=0.207 tol=1.84 2024-07-27 20:50:57,285 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.2 pTM=0.605 ipTM=0.218 tol=2.53 2024-07-27 20:51:11,757 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.4 pTM=0.61 ipTM=0.255 tol=2.68 2024-07-27 20:51:26,232 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.5 pTM=0.634 ipTM=0.369 tol=1.6 2024-07-27 20:51:40,706 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.7 pTM=0.63 ipTM=0.351 tol=1.16 2024-07-27 20:51:55,173 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.2 pTM=0.623 ipTM=0.309 tol=1.93 2024-07-27 20:52:09,668 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70 pTM=0.615 ipTM=0.264 tol=1.2 2024-07-27 20:52:24,163 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.8 pTM=0.613 ipTM=0.254 tol=1.44 2024-07-27 20:52:38,668 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.5 pTM=0.606 ipTM=0.224 tol=1.08 2024-07-27 20:52:53,172 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.3 pTM=0.604 ipTM=0.22 tol=1.03 2024-07-27 20:53:07,675 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.4 pTM=0.603 ipTM=0.21 tol=1.1 2024-07-27 20:53:22,165 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.2 pTM=0.601 ipTM=0.2 tol=1.18 2024-07-27 20:53:36,653 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.2 pTM=0.599 ipTM=0.203 tol=1.2 2024-07-27 20:53:51,138 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.2 pTM=0.6 ipTM=0.218 tol=1.1 2024-07-27 20:54:05,634 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.6 pTM=0.607 ipTM=0.227 tol=0.888 2024-07-27 20:54:20,092 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.6 pTM=0.607 ipTM=0.23 tol=0.826 2024-07-27 20:54:34,562 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.4 pTM=0.602 ipTM=0.203 tol=1.09 2024-07-27 20:54:49,048 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.1 pTM=0.598 ipTM=0.191 tol=1.13 2024-07-27 20:55:03,529 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.6 pTM=0.602 ipTM=0.199 tol=1.11 2024-07-27 20:55:18,019 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.3 pTM=0.602 ipTM=0.197 tol=1.82 2024-07-27 20:55:32,501 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.7 pTM=0.61 ipTM=0.242 tol=2.07 2024-07-27 20:55:46,983 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.5 pTM=0.606 ipTM=0.226 tol=0.783 2024-07-27 20:56:01,460 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.4 pTM=0.604 ipTM=0.229 tol=0.77 2024-07-27 20:56:15,921 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.6 pTM=0.601 ipTM=0.217 tol=0.534 2024-07-27 20:56:30,387 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.1 pTM=0.599 ipTM=0.205 tol=0.707 2024-07-27 20:56:44,865 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.1 pTM=0.596 ipTM=0.186 tol=1.01 2024-07-27 20:56:59,338 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.1 pTM=0.595 ipTM=0.195 tol=1.42 2024-07-27 20:56:59,339 alphafold2_multimer_v3_model_2_seed_000 took 448.9s (30 recycles) 2024-07-27 20:57:14,305 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.6 pTM=0.577 ipTM=0.151 2024-07-27 20:57:28,813 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.8 pTM=0.585 ipTM=0.147 tol=11.2 2024-07-27 20:57:43,334 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.6 pTM=0.578 ipTM=0.127 tol=8.66 2024-07-27 20:57:57,842 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.4 pTM=0.578 ipTM=0.153 tol=6.63 2024-07-27 20:58:12,376 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.5 pTM=0.576 ipTM=0.14 tol=12.9 2024-07-27 20:58:26,866 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.3 pTM=0.575 ipTM=0.145 tol=10.8 2024-07-27 20:58:41,360 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.7 pTM=0.575 ipTM=0.152 tol=7.35 2024-07-27 20:58:55,870 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.2 pTM=0.577 ipTM=0.144 tol=4.9 2024-07-27 20:59:10,364 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.6 pTM=0.58 ipTM=0.145 tol=6.54 2024-07-27 20:59:24,849 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.4 pTM=0.58 ipTM=0.141 tol=7.61 2024-07-27 20:59:39,356 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.6 pTM=0.584 ipTM=0.14 tol=4.8 2024-07-27 20:59:53,866 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.5 pTM=0.582 ipTM=0.134 tol=5.66 2024-07-27 21:00:08,367 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.7 pTM=0.585 ipTM=0.141 tol=6.4 2024-07-27 21:00:22,887 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.1 pTM=0.582 ipTM=0.164 tol=6.45 2024-07-27 21:00:37,375 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.8 pTM=0.585 ipTM=0.16 tol=5.88 2024-07-27 21:00:51,844 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.9 pTM=0.58 ipTM=0.151 tol=3.01 2024-07-27 21:01:06,341 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.8 pTM=0.578 ipTM=0.143 tol=3.48 2024-07-27 21:01:20,852 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.1 pTM=0.583 ipTM=0.153 tol=3.97 2024-07-27 21:01:35,387 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.9 pTM=0.583 ipTM=0.144 tol=4.28 2024-07-27 21:01:49,906 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.4 pTM=0.581 ipTM=0.16 tol=4.88 2024-07-27 21:02:04,439 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.6 pTM=0.579 ipTM=0.132 tol=9.15 2024-07-27 21:02:18,968 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.6 pTM=0.584 ipTM=0.139 tol=6.8 2024-07-27 21:02:33,471 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.8 pTM=0.578 ipTM=0.136 tol=5.61 2024-07-27 21:02:47,964 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.1 pTM=0.582 ipTM=0.149 tol=3.06 2024-07-27 21:03:02,456 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.8 pTM=0.58 ipTM=0.145 tol=4.93 2024-07-27 21:03:16,939 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.9 pTM=0.578 ipTM=0.146 tol=3.65 2024-07-27 21:03:31,423 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.9 pTM=0.576 ipTM=0.152 tol=3.07 2024-07-27 21:03:45,934 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.4 pTM=0.579 ipTM=0.15 tol=4.22 2024-07-27 21:04:00,423 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.4 pTM=0.583 ipTM=0.157 tol=3.39 2024-07-27 21:04:14,898 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.1 pTM=0.579 ipTM=0.15 tol=1.75 2024-07-27 21:04:29,400 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.4 pTM=0.581 ipTM=0.156 tol=1.61 2024-07-27 21:04:29,401 alphafold2_multimer_v3_model_3_seed_000 took 449.6s (30 recycles) 2024-07-27 21:04:44,377 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.1 pTM=0.616 ipTM=0.201 2024-07-27 21:04:58,838 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.8 pTM=0.606 ipTM=0.154 tol=9.48 2024-07-27 21:05:13,331 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.589 ipTM=0.15 tol=10 2024-07-27 21:05:27,797 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67 pTM=0.598 ipTM=0.172 tol=5.99 2024-07-27 21:05:42,265 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.4 pTM=0.612 ipTM=0.244 tol=4.4 2024-07-27 21:05:56,728 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.6 pTM=0.609 ipTM=0.236 tol=3.36 2024-07-27 21:06:11,193 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.5 pTM=0.613 ipTM=0.247 tol=2.74 2024-07-27 21:06:25,641 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.5 pTM=0.631 ipTM=0.367 tol=2.91 2024-07-27 21:06:40,109 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.8 pTM=0.639 ipTM=0.411 tol=1.95 2024-07-27 21:06:54,553 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.5 pTM=0.634 ipTM=0.382 tol=2.18 2024-07-27 21:07:09,012 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.6 pTM=0.648 ipTM=0.444 tol=1.56 2024-07-27 21:07:23,465 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.646 ipTM=0.421 tol=1.53 2024-07-27 21:07:37,925 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.1 pTM=0.646 ipTM=0.419 tol=1.19 2024-07-27 21:07:52,394 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.5 pTM=0.649 ipTM=0.453 tol=1.31 2024-07-27 21:08:06,839 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.9 pTM=0.64 ipTM=0.416 tol=1.44 2024-07-27 21:08:21,329 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.1 pTM=0.644 ipTM=0.434 tol=1.63 2024-07-27 21:08:35,780 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70 pTM=0.64 ipTM=0.422 tol=1.67 2024-07-27 21:08:50,262 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.2 pTM=0.645 ipTM=0.461 tol=2.65 2024-07-27 21:09:04,725 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.6 pTM=0.653 ipTM=0.476 tol=2.62 2024-07-27 21:09:19,175 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.5 pTM=0.648 ipTM=0.463 tol=1.4 2024-07-27 21:09:33,651 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.4 pTM=0.646 ipTM=0.449 tol=2.23 2024-07-27 21:09:48,118 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.6 pTM=0.652 ipTM=0.474 tol=2.64 2024-07-27 21:10:02,561 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.2 pTM=0.646 ipTM=0.467 tol=1.89 2024-07-27 21:10:17,045 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71 pTM=0.658 ipTM=0.5 tol=1.42 2024-07-27 21:10:31,519 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.2 pTM=0.649 ipTM=0.473 tol=1.79 2024-07-27 21:10:45,954 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.5 pTM=0.648 ipTM=0.485 tol=1.45 2024-07-27 21:11:00,397 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.1 pTM=0.644 ipTM=0.458 tol=1.53 2024-07-27 21:11:14,852 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70 pTM=0.642 ipTM=0.442 tol=1.26 2024-07-27 21:11:29,307 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70 pTM=0.642 ipTM=0.436 tol=1.93 2024-07-27 21:11:43,760 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.8 pTM=0.637 ipTM=0.404 tol=1.64 2024-07-27 21:11:58,222 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.1 pTM=0.638 ipTM=0.409 tol=0.813 2024-07-27 21:11:58,223 alphafold2_multimer_v3_model_4_seed_000 took 448.3s (30 recycles) 2024-07-27 21:12:13,237 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.5 pTM=0.607 ipTM=0.168 2024-07-27 21:12:27,759 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.4 pTM=0.6 ipTM=0.144 tol=15.5 2024-07-27 21:12:42,279 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.6 pTM=0.591 ipTM=0.157 tol=7.62 2024-07-27 21:12:56,817 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.2 pTM=0.596 ipTM=0.141 tol=4.59 2024-07-27 21:13:11,336 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.9 pTM=0.597 ipTM=0.149 tol=4.58 2024-07-27 21:13:25,856 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.2 pTM=0.599 ipTM=0.137 tol=3.85 2024-07-27 21:13:40,380 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.3 pTM=0.597 ipTM=0.157 tol=7.27 2024-07-27 21:13:54,919 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.4 pTM=0.599 ipTM=0.16 tol=6.97 2024-07-27 21:14:09,451 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.6 pTM=0.6 ipTM=0.194 tol=5.23 2024-07-27 21:14:23,957 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.8 pTM=0.603 ipTM=0.179 tol=7.22 2024-07-27 21:14:38,465 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.4 pTM=0.602 ipTM=0.188 tol=5.16 2024-07-27 21:14:52,976 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.8 pTM=0.605 ipTM=0.177 tol=3.75 2024-07-27 21:15:07,477 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.7 pTM=0.606 ipTM=0.202 tol=2.05 2024-07-27 21:15:21,976 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.9 pTM=0.603 ipTM=0.188 tol=1.79 2024-07-27 21:15:36,480 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.6 pTM=0.604 ipTM=0.186 tol=2.23 2024-07-27 21:15:50,992 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.4 pTM=0.601 ipTM=0.163 tol=3.59 2024-07-27 21:16:05,491 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.7 pTM=0.604 ipTM=0.216 tol=4.45 2024-07-27 21:16:20,006 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.4 pTM=0.612 ipTM=0.248 tol=3.13 2024-07-27 21:16:34,485 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.634 ipTM=0.405 tol=6.96 2024-07-27 21:16:48,987 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.6 pTM=0.607 ipTM=0.178 tol=10.1 2024-07-27 21:17:03,500 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.1 pTM=0.612 ipTM=0.218 tol=6.21 2024-07-27 21:17:18,013 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68 pTM=0.608 ipTM=0.208 tol=1.87 2024-07-27 21:17:32,493 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.4 pTM=0.602 ipTM=0.199 tol=2.14 2024-07-27 21:17:46,986 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.9 pTM=0.608 ipTM=0.209 tol=2.14 2024-07-27 21:18:01,486 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.5 pTM=0.601 ipTM=0.19 tol=1.89 2024-07-27 21:18:15,994 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.4 pTM=0.601 ipTM=0.167 tol=1.93 2024-07-27 21:18:30,511 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.5 pTM=0.602 ipTM=0.182 tol=2.2 2024-07-27 21:18:45,026 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.6 pTM=0.601 ipTM=0.183 tol=2.38 2024-07-27 21:18:59,552 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.8 pTM=0.604 ipTM=0.194 tol=6.48 2024-07-27 21:19:14,081 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.3 pTM=0.601 ipTM=0.161 tol=6.7 2024-07-27 21:19:28,588 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.4 pTM=0.596 ipTM=0.174 tol=2.24 2024-07-27 21:19:28,589 alphafold2_multimer_v3_model_5_seed_000 took 449.9s (30 recycles) 2024-07-27 21:19:29,072 reranking models by 'multimer' metric 2024-07-27 21:19:31,594 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 21:21:31,266 Relaxation took 122.2s 2024-07-27 21:21:31,266 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.1 pTM=0.638 ipTM=0.409 2024-07-27 21:22:39,997 Relaxation took 68.7s 2024-07-27 21:22:39,997 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.1 pTM=0.595 ipTM=0.195 2024-07-27 21:23:43,450 Relaxation took 63.5s 2024-07-27 21:23:43,450 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.4 pTM=0.596 ipTM=0.174 2024-07-27 21:25:08,675 Relaxation took 85.2s 2024-07-27 21:25:08,675 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.2 pTM=0.604 ipTM=0.166 2024-07-27 21:26:22,079 Relaxation took 73.4s 2024-07-27 21:26:22,079 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.4 pTM=0.581 ipTM=0.156 2024-07-27 21:26:23,695 Done