2024-07-27 20:43:20,332 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 20:43:20,707 Running on GPU
2024-07-27 20:43:24,284 Found 6 citations for tools or databases
2024-07-27 20:43:24,284 Query 1/1: THRA_ASB11 (length 813)
2024-07-27 20:43:24,780 Sleeping for 6s. Reason: PENDING
2024-07-27 20:43:31,216 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:43:37,651 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:43:44,108 Sleeping for 5s. Reason: RUNNING
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2024-07-27 20:43:57,405 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:44:05,831 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:44:12,247 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:44:22,688 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:44:28,113 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:44:38,551 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:44:45,001 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:44:53,455 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:45:02,897 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:45:09,745 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:45:25,235 Sleeping for 9s. Reason: PENDING
2024-07-27 20:45:34,670 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:45:45,096 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:45:55,539 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:46:00,969 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:46:10,590 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:46:16,035 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:46:21,458 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:46:28,904 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:46:37,349 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:46:43,772 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:46:57,699 Setting max_seq=508, max_extra_seq=2048
2024-07-27 20:51:10,695 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.8 pTM=0.396 ipTM=0.184
2024-07-27 20:51:27,517 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63 pTM=0.44 ipTM=0.369 tol=14.5
2024-07-27 20:51:44,355 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.7 pTM=0.401 ipTM=0.173 tol=4.79
2024-07-27 20:52:01,216 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.8 pTM=0.402 ipTM=0.185 tol=4.26
2024-07-27 20:52:18,118 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.8 pTM=0.402 ipTM=0.202 tol=3.72
2024-07-27 20:52:35,054 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.2 pTM=0.411 ipTM=0.208 tol=3.53
2024-07-27 20:52:52,016 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.9 pTM=0.404 ipTM=0.187 tol=3.33
2024-07-27 20:53:09,026 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.1 pTM=0.413 ipTM=0.212 tol=4.86
2024-07-27 20:53:26,044 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.4 pTM=0.408 ipTM=0.184 tol=4.44
2024-07-27 20:53:43,073 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61 pTM=0.413 ipTM=0.196 tol=3.29
2024-07-27 20:54:00,130 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.6 pTM=0.411 ipTM=0.187 tol=2.28
2024-07-27 20:54:17,180 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.7 pTM=0.413 ipTM=0.205 tol=3.13
2024-07-27 20:54:34,237 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.8 pTM=0.412 ipTM=0.2 tol=3.31
2024-07-27 20:54:51,286 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.8 pTM=0.412 ipTM=0.2 tol=1.79
2024-07-27 20:55:08,351 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.9 pTM=0.409 ipTM=0.189 tol=2.08
2024-07-27 20:55:25,433 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.4 pTM=0.416 ipTM=0.214 tol=2.98
2024-07-27 20:55:42,515 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.3 pTM=0.41 ipTM=0.202 tol=4.62
2024-07-27 20:55:59,632 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.6 pTM=0.412 ipTM=0.214 tol=2.53
2024-07-27 20:56:16,728 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.3 pTM=0.406 ipTM=0.199 tol=2.56
2024-07-27 20:56:33,807 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.4 pTM=0.411 ipTM=0.207 tol=2.4
2024-07-27 20:56:50,889 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.9 pTM=0.406 ipTM=0.177 tol=3.93
2024-07-27 20:57:07,956 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.1 pTM=0.409 ipTM=0.198 tol=3.25
2024-07-27 20:57:25,017 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.7 pTM=0.406 ipTM=0.194 tol=1.42
2024-07-27 20:57:42,077 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.9 pTM=0.41 ipTM=0.196 tol=3.23
2024-07-27 20:57:59,150 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.9 pTM=0.408 ipTM=0.191 tol=1.66
2024-07-27 20:58:16,200 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62 pTM=0.409 ipTM=0.209 tol=2.79
2024-07-27 20:58:33,243 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.2 pTM=0.408 ipTM=0.196 tol=1.83
2024-07-27 20:58:50,286 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.9 pTM=0.411 ipTM=0.206 tol=1.72
2024-07-27 20:59:07,315 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62 pTM=0.408 ipTM=0.198 tol=2.29
2024-07-27 20:59:24,360 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.2 pTM=0.409 ipTM=0.198 tol=2.67
2024-07-27 20:59:41,397 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.2 pTM=0.41 ipTM=0.201 tol=3.57
2024-07-27 20:59:41,398 alphafold2_multimer_v3_model_1_seed_000 took 757.0s (30 recycles)
2024-07-27 20:59:58,991 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.3 pTM=0.404 ipTM=0.175
2024-07-27 21:00:16,058 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.8 pTM=0.4 ipTM=0.189 tol=7.81
2024-07-27 21:00:33,122 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.6 pTM=0.396 ipTM=0.208 tol=6.05
2024-07-27 21:00:50,208 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.2 pTM=0.403 ipTM=0.19 tol=3.39
2024-07-27 21:01:07,282 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.9 pTM=0.398 ipTM=0.216 tol=3.57
2024-07-27 21:01:24,365 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.1 pTM=0.405 ipTM=0.195 tol=2.44
2024-07-27 21:01:41,451 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.6 pTM=0.402 ipTM=0.217 tol=4.33
2024-07-27 21:01:58,562 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.4 pTM=0.402 ipTM=0.188 tol=2.45
2024-07-27 21:02:15,657 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.1 pTM=0.402 ipTM=0.195 tol=3.12
2024-07-27 21:02:32,764 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.1 pTM=0.403 ipTM=0.198 tol=3.23
2024-07-27 21:02:49,877 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.5 pTM=0.407 ipTM=0.194 tol=3.8
2024-07-27 21:03:06,984 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.5 pTM=0.406 ipTM=0.195 tol=3.05
2024-07-27 21:03:24,078 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.3 pTM=0.405 ipTM=0.192 tol=3.97
2024-07-27 21:03:41,167 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.6 pTM=0.4 ipTM=0.215 tol=3.01
2024-07-27 21:03:58,248 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.4 pTM=0.404 ipTM=0.183 tol=2.62
2024-07-27 21:04:15,341 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.7 pTM=0.406 ipTM=0.208 tol=1.49
2024-07-27 21:04:32,422 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.4 pTM=0.402 ipTM=0.19 tol=1.9
2024-07-27 21:04:49,517 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.8 pTM=0.408 ipTM=0.184 tol=1.64
2024-07-27 21:05:06,599 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.4 pTM=0.405 ipTM=0.189 tol=2.6
2024-07-27 21:05:23,688 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.409 ipTM=0.198 tol=2.54
2024-07-27 21:05:40,771 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.8 pTM=0.408 ipTM=0.212 tol=1.71
2024-07-27 21:05:57,869 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.6 pTM=0.408 ipTM=0.202 tol=1.53
2024-07-27 21:06:14,951 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.8 pTM=0.407 ipTM=0.216 tol=1.46
2024-07-27 21:06:32,043 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.6 pTM=0.41 ipTM=0.2 tol=1.51
2024-07-27 21:06:49,132 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.1 pTM=0.411 ipTM=0.302 tol=1.73
2024-07-27 21:07:06,224 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.5 pTM=0.409 ipTM=0.226 tol=1.95
2024-07-27 21:07:23,324 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.2 pTM=0.408 ipTM=0.174 tol=2.54
2024-07-27 21:07:40,439 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.4 pTM=0.41 ipTM=0.207 tol=1.41
2024-07-27 21:07:57,513 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.4 pTM=0.408 ipTM=0.239 tol=1.49
2024-07-27 21:08:14,611 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.5 pTM=0.408 ipTM=0.202 tol=1.18
2024-07-27 21:08:31,704 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.8 pTM=0.408 ipTM=0.218 tol=1.47
2024-07-27 21:08:31,704 alphafold2_multimer_v3_model_2_seed_000 took 529.8s (30 recycles)
2024-07-27 21:08:49,278 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64 pTM=0.392 ipTM=0.177
2024-07-27 21:09:06,373 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.4 pTM=0.421 ipTM=0.335 tol=12.8
2024-07-27 21:09:23,438 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.2 pTM=0.387 ipTM=0.229 tol=11.1
2024-07-27 21:09:40,517 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.3 pTM=0.391 ipTM=0.193 tol=6.09
2024-07-27 21:09:57,586 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.1 pTM=0.398 ipTM=0.202 tol=4.4
2024-07-27 21:10:14,660 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.2 pTM=0.402 ipTM=0.188 tol=2.96
2024-07-27 21:10:31,723 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.1 pTM=0.402 ipTM=0.206 tol=3.63
2024-07-27 21:10:48,791 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.9 pTM=0.404 ipTM=0.189 tol=2.6
2024-07-27 21:11:05,869 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.9 pTM=0.403 ipTM=0.2 tol=2.4
2024-07-27 21:11:22,952 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.8 pTM=0.406 ipTM=0.201 tol=3.08
2024-07-27 21:11:40,052 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.9 pTM=0.405 ipTM=0.196 tol=2.23
2024-07-27 21:11:57,149 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.8 pTM=0.403 ipTM=0.183 tol=1.64
2024-07-27 21:12:14,249 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.9 pTM=0.409 ipTM=0.189 tol=1.85
2024-07-27 21:12:31,317 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.6 pTM=0.402 ipTM=0.181 tol=1.17
2024-07-27 21:12:48,381 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63 pTM=0.407 ipTM=0.187 tol=2.14
2024-07-27 21:13:05,455 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.7 pTM=0.406 ipTM=0.178 tol=1.63
2024-07-27 21:13:22,510 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.7 pTM=0.408 ipTM=0.181 tol=1.99
2024-07-27 21:13:39,590 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.9 pTM=0.405 ipTM=0.181 tol=1.51
2024-07-27 21:13:56,651 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.6 pTM=0.409 ipTM=0.182 tol=1.23
2024-07-27 21:14:13,725 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63 pTM=0.405 ipTM=0.191 tol=1.92
2024-07-27 21:14:30,784 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.7 pTM=0.407 ipTM=0.185 tol=1.97
2024-07-27 21:14:47,856 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.8 pTM=0.406 ipTM=0.182 tol=2.29
2024-07-27 21:15:04,927 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.7 pTM=0.408 ipTM=0.186 tol=1.76
2024-07-27 21:15:22,012 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.9 pTM=0.403 ipTM=0.201 tol=3.3
2024-07-27 21:15:39,072 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.6 pTM=0.409 ipTM=0.194 tol=3.17
2024-07-27 21:15:56,136 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.8 pTM=0.406 ipTM=0.208 tol=2.38
2024-07-27 21:16:13,190 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.9 pTM=0.408 ipTM=0.2 tol=2.13
2024-07-27 21:16:30,240 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.5 pTM=0.408 ipTM=0.214 tol=2.3
2024-07-27 21:16:47,299 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.7 pTM=0.407 ipTM=0.207 tol=2.27
2024-07-27 21:17:04,357 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.8 pTM=0.407 ipTM=0.222 tol=2.52
2024-07-27 21:17:21,408 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.7 pTM=0.409 ipTM=0.213 tol=3.05
2024-07-27 21:17:21,409 alphafold2_multimer_v3_model_3_seed_000 took 529.2s (30 recycles)
2024-07-27 21:17:38,989 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.8 pTM=0.379 ipTM=0.176
2024-07-27 21:17:56,069 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.3 pTM=0.396 ipTM=0.204 tol=7.38
2024-07-27 21:18:13,146 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.9 pTM=0.385 ipTM=0.199 tol=4.99
2024-07-27 21:18:30,207 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.39 ipTM=0.177 tol=5.25
2024-07-27 21:18:47,280 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.5 pTM=0.391 ipTM=0.183 tol=5.16
2024-07-27 21:19:04,358 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.7 pTM=0.39 ipTM=0.174 tol=4.5
2024-07-27 21:19:21,408 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.2 pTM=0.391 ipTM=0.168 tol=4.12
2024-07-27 21:19:38,484 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.5 pTM=0.394 ipTM=0.163 tol=3.61
2024-07-27 21:19:55,547 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.1 pTM=0.395 ipTM=0.175 tol=4.15
2024-07-27 21:20:12,604 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60 pTM=0.4 ipTM=0.207 tol=3.13
2024-07-27 21:20:29,660 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.5 pTM=0.396 ipTM=0.202 tol=3.37
2024-07-27 21:20:46,729 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.399 ipTM=0.192 tol=2.85
2024-07-27 21:21:03,792 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.6 pTM=0.396 ipTM=0.201 tol=2.65
2024-07-27 21:21:20,853 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.8 pTM=0.396 ipTM=0.185 tol=3.15
2024-07-27 21:21:37,917 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.6 pTM=0.394 ipTM=0.196 tol=2.79
2024-07-27 21:21:54,981 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.7 pTM=0.396 ipTM=0.18 tol=3.32
2024-07-27 21:22:12,048 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.3 pTM=0.394 ipTM=0.198 tol=3.26
2024-07-27 21:22:29,124 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.3 pTM=0.396 ipTM=0.207 tol=4.43
2024-07-27 21:22:46,178 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.1 pTM=0.406 ipTM=0.18 tol=4.89
2024-07-27 21:23:03,239 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.6 pTM=0.397 ipTM=0.172 tol=4.33
2024-07-27 21:23:20,302 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.2 pTM=0.398 ipTM=0.199 tol=3.26
2024-07-27 21:23:37,377 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.4 pTM=0.397 ipTM=0.197 tol=4.79
2024-07-27 21:23:54,446 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.4 pTM=0.398 ipTM=0.206 tol=3.91
2024-07-27 21:24:11,506 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.5 pTM=0.395 ipTM=0.205 tol=3.29
2024-07-27 21:24:28,570 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.6 pTM=0.398 ipTM=0.189 tol=3.5
2024-07-27 21:24:45,655 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.4 pTM=0.398 ipTM=0.194 tol=3.11
2024-07-27 21:25:02,721 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.8 pTM=0.402 ipTM=0.192 tol=2.49
2024-07-27 21:25:19,787 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.8 pTM=0.395 ipTM=0.188 tol=3.86
2024-07-27 21:25:36,853 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.5 pTM=0.396 ipTM=0.189 tol=3.65
2024-07-27 21:25:53,918 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.2 pTM=0.396 ipTM=0.198 tol=3.23
2024-07-27 21:26:10,982 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.8 pTM=0.398 ipTM=0.189 tol=2.67
2024-07-27 21:26:10,983 alphafold2_multimer_v3_model_4_seed_000 took 529.0s (30 recycles)
2024-07-27 21:26:28,572 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.7 pTM=0.429 ipTM=0.487
2024-07-27 21:26:45,673 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.5 pTM=0.42 ipTM=0.354 tol=12.1
2024-07-27 21:27:02,768 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.6 pTM=0.403 ipTM=0.274 tol=5.77
2024-07-27 21:27:19,882 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.6 pTM=0.384 ipTM=0.19 tol=5.54
2024-07-27 21:27:36,994 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.39 ipTM=0.214 tol=5.02
2024-07-27 21:27:54,087 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.4 pTM=0.4 ipTM=0.213 tol=4.31
2024-07-27 21:28:11,195 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.2 pTM=0.388 ipTM=0.204 tol=3.58
2024-07-27 21:28:28,302 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.3 pTM=0.385 ipTM=0.183 tol=4.81
2024-07-27 21:28:45,394 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.391 ipTM=0.197 tol=2.92
2024-07-27 21:29:02,502 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.3 pTM=0.385 ipTM=0.165 tol=2.25
2024-07-27 21:29:19,595 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.3 pTM=0.389 ipTM=0.198 tol=4.15
2024-07-27 21:29:36,701 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63 pTM=0.392 ipTM=0.193 tol=4.05
2024-07-27 21:29:53,793 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62 pTM=0.386 ipTM=0.173 tol=3.84
2024-07-27 21:30:10,902 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62 pTM=0.384 ipTM=0.171 tol=1.74
2024-07-27 21:30:28,002 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.9 pTM=0.387 ipTM=0.175 tol=3.77
2024-07-27 21:30:45,110 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62 pTM=0.385 ipTM=0.168 tol=4.99
2024-07-27 21:31:02,205 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.6 pTM=0.386 ipTM=0.175 tol=2.13
2024-07-27 21:31:19,302 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.8 pTM=0.386 ipTM=0.166 tol=3.57
2024-07-27 21:31:36,417 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.6 pTM=0.389 ipTM=0.173 tol=3.82
2024-07-27 21:31:53,543 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62 pTM=0.384 ipTM=0.171 tol=3.44
2024-07-27 21:32:10,645 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.6 pTM=0.387 ipTM=0.174 tol=3.57
2024-07-27 21:32:27,767 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.3 pTM=0.394 ipTM=0.25 tol=4.97
2024-07-27 21:32:44,880 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.7 pTM=0.383 ipTM=0.193 tol=5.22
2024-07-27 21:33:01,979 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.4 pTM=0.389 ipTM=0.227 tol=3.81
2024-07-27 21:33:19,088 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.8 pTM=0.391 ipTM=0.197 tol=3.52
2024-07-27 21:33:36,186 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.3 pTM=0.395 ipTM=0.19 tol=3.11
2024-07-27 21:33:53,304 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.5 pTM=0.393 ipTM=0.192 tol=4.51
2024-07-27 21:34:10,417 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.8 pTM=0.396 ipTM=0.195 tol=2.95
2024-07-27 21:34:27,524 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.6 pTM=0.391 ipTM=0.18 tol=4.24
2024-07-27 21:34:44,672 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.4 pTM=0.399 ipTM=0.247 tol=7.33
2024-07-27 21:35:01,818 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.2 pTM=0.388 ipTM=0.18 tol=7.54
2024-07-27 21:35:01,819 alphafold2_multimer_v3_model_5_seed_000 took 530.3s (30 recycles)
2024-07-27 21:35:02,350 reranking models by 'multimer' metric
2024-07-27 21:35:03,374 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 21:36:34,234 Relaxation took 91.9s
2024-07-27 21:36:34,234 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.8 pTM=0.408 ipTM=0.218
2024-07-27 21:38:12,607 Relaxation took 98.4s
2024-07-27 21:38:12,607 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.7 pTM=0.409 ipTM=0.213
2024-07-27 21:39:37,672 Relaxation took 85.1s
2024-07-27 21:39:37,672 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.2 pTM=0.41 ipTM=0.201
2024-07-27 21:41:31,926 Relaxation took 114.3s
2024-07-27 21:41:31,927 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.8 pTM=0.398 ipTM=0.189
2024-07-27 21:42:50,148 Relaxation took 78.2s
2024-07-27 21:42:50,148 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.2 pTM=0.388 ipTM=0.18
2024-07-27 21:42:51,978 Done