2024-07-27 20:45:16,407 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 20:45:16,748 Running on GPU
2024-07-27 20:45:20,168 Found 6 citations for tools or databases
2024-07-27 20:45:20,168 Query 1/1: THRA_FBXO38 (length 1678)
2024-07-27 20:45:20,635 Sleeping for 10s. Reason: PENDING
2024-07-27 20:45:31,081 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:45:39,529 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:45:46,948 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:45:53,392 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:46:03,826 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:46:12,245 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:46:22,683 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:46:30,126 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:46:35,549 Sleeping for 10s. Reason: RUNNING
2024-07-27 20:46:47,006 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:46:54,485 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:47:01,901 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:47:07,326 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:47:14,753 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:47:20,194 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:47:28,659 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:47:35,088 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:47:45,737 Sleeping for 7s. Reason: PENDING
2024-07-27 20:47:53,172 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:48:01,620 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:48:08,039 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:48:16,668 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:48:24,119 Sleeping for 7s. Reason: RUNNING
2024-07-27 20:48:31,563 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:48:37,002 Sleeping for 5s. Reason: RUNNING
2024-07-27 20:48:42,607 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:48:52,055 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:49:04,573 Setting max_seq=508, max_extra_seq=2048
2024-07-27 20:53:59,616 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.9 pTM=0.493 ipTM=0.275
2024-07-27 20:55:19,713 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.4 pTM=0.56 ipTM=0.44 tol=17.8
2024-07-27 20:56:40,098 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.3 pTM=0.538 ipTM=0.374 tol=8.95
2024-07-27 20:58:00,518 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57 pTM=0.51 ipTM=0.302 tol=12.5
2024-07-27 20:59:20,825 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57 pTM=0.516 ipTM=0.328 tol=7.43
2024-07-27 21:00:41,119 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.6 pTM=0.504 ipTM=0.287 tol=5.59
2024-07-27 21:02:01,438 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.7 pTM=0.506 ipTM=0.302 tol=4.38
2024-07-27 21:03:21,727 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56 pTM=0.495 ipTM=0.244 tol=12
2024-07-27 21:04:41,987 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.8 pTM=0.493 ipTM=0.242 tol=5.51
2024-07-27 21:06:02,180 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.8 pTM=0.537 ipTM=0.373 tol=9.11
2024-07-27 21:07:22,544 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.8 pTM=0.517 ipTM=0.295 tol=3.69
2024-07-27 21:08:42,933 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58 pTM=0.519 ipTM=0.3 tol=4.58
2024-07-27 21:10:03,264 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.9 pTM=0.524 ipTM=0.324 tol=4.63
2024-07-27 21:11:23,596 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.7 pTM=0.517 ipTM=0.302 tol=5.02
2024-07-27 21:12:43,938 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.5 pTM=0.509 ipTM=0.274 tol=4.38
2024-07-27 21:14:04,201 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.7 pTM=0.542 ipTM=0.387 tol=5.38
2024-07-27 21:15:24,501 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.3 pTM=0.534 ipTM=0.352 tol=5.51
2024-07-27 21:16:44,755 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.7 pTM=0.514 ipTM=0.291 tol=4.18
2024-07-27 21:18:05,029 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.8 pTM=0.515 ipTM=0.304 tol=5.68
2024-07-27 21:19:25,344 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.9 pTM=0.509 ipTM=0.272 tol=4.88
2024-07-27 21:20:45,574 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.4 pTM=0.532 ipTM=0.351 tol=5.18
2024-07-27 21:22:05,882 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.9 pTM=0.51 ipTM=0.276 tol=4.74
2024-07-27 21:23:26,189 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58 pTM=0.535 ipTM=0.365 tol=5.85
2024-07-27 21:24:46,498 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.9 pTM=0.547 ipTM=0.381 tol=5.23
2024-07-27 21:26:06,832 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.9 pTM=0.515 ipTM=0.293 tol=4.07
2024-07-27 21:27:27,182 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.1 pTM=0.52 ipTM=0.314 tol=5.05
2024-07-27 21:28:47,492 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.1 pTM=0.522 ipTM=0.32 tol=4.86
2024-07-27 21:30:07,840 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.9 pTM=0.512 ipTM=0.285 tol=3.86
2024-07-27 21:31:28,188 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58 pTM=0.511 ipTM=0.283 tol=5.65
2024-07-27 21:32:48,560 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.5 pTM=0.504 ipTM=0.244 tol=3.69
2024-07-27 21:34:08,910 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.6 pTM=0.506 ipTM=0.252 tol=4.16
2024-07-27 21:34:08,911 alphafold2_multimer_v3_model_1_seed_000 took 2698.8s (30 recycles)
2024-07-27 21:35:31,526 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.3 pTM=0.53 ipTM=0.355
2024-07-27 21:36:52,411 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58 pTM=0.495 ipTM=0.189 tol=21.4
2024-07-27 21:38:13,091 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.7 pTM=0.502 ipTM=0.229 tol=18.3
2024-07-27 21:39:33,718 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.6 pTM=0.491 ipTM=0.183 tol=10.7
2024-07-27 21:40:54,317 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.7 pTM=0.5 ipTM=0.212 tol=8.12
2024-07-27 21:42:14,972 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.8 pTM=0.502 ipTM=0.219 tol=7.7
2024-07-27 21:43:35,530 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.9 pTM=0.498 ipTM=0.208 tol=9.13
2024-07-27 21:44:56,055 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.5 pTM=0.514 ipTM=0.278 tol=12.6
2024-07-27 21:46:16,501 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.6 pTM=0.542 ipTM=0.362 tol=15.8
2024-07-27 21:47:36,978 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.1 pTM=0.507 ipTM=0.236 tol=8.02
2024-07-27 21:48:57,511 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.4 pTM=0.504 ipTM=0.223 tol=7.56
2024-07-27 21:50:18,110 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.9 pTM=0.499 ipTM=0.204 tol=5.17
2024-07-27 21:51:38,546 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.9 pTM=0.536 ipTM=0.356 tol=11.5
2024-07-27 21:52:59,040 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.3 pTM=0.517 ipTM=0.295 tol=8.44
2024-07-27 21:54:19,562 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.8 pTM=0.509 ipTM=0.256 tol=7.75
2024-07-27 21:55:39,960 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.8 pTM=0.544 ipTM=0.384 tol=7.36
2024-07-27 21:57:00,341 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.4 pTM=0.519 ipTM=0.302 tol=3.73
2024-07-27 21:58:20,778 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59 pTM=0.504 ipTM=0.234 tol=11.9
2024-07-27 21:59:41,184 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.4 pTM=0.509 ipTM=0.258 tol=7.12
2024-07-27 22:01:01,536 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60 pTM=0.536 ipTM=0.359 tol=8.5
2024-07-27 22:02:21,907 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.8 pTM=0.522 ipTM=0.308 tol=8.63
2024-07-27 22:03:42,250 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.6 pTM=0.539 ipTM=0.345 tol=16.8
2024-07-27 22:05:02,656 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.2 pTM=0.507 ipTM=0.24 tol=7.2
2024-07-27 22:06:23,056 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.2 pTM=0.55 ipTM=0.4 tol=13.8
2024-07-27 22:07:43,499 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.7 pTM=0.523 ipTM=0.318 tol=9.63
2024-07-27 22:09:04,064 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.9 pTM=0.505 ipTM=0.237 tol=6.34
2024-07-27 22:10:24,498 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.2 pTM=0.542 ipTM=0.375 tol=6.46
2024-07-27 22:11:45,049 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.6 pTM=0.523 ipTM=0.312 tol=4.06
2024-07-27 22:13:05,464 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.8 pTM=0.534 ipTM=0.358 tol=14.4
2024-07-27 22:14:25,848 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.8 pTM=0.536 ipTM=0.356 tol=10.5
2024-07-27 22:15:46,144 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.5 pTM=0.532 ipTM=0.32 tol=12.8
2024-07-27 22:15:46,146 alphafold2_multimer_v3_model_2_seed_000 took 2495.1s (30 recycles)
2024-07-27 22:17:08,587 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55 pTM=0.506 ipTM=0.281
2024-07-27 22:18:28,797 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.9 pTM=0.583 ipTM=0.485 tol=24.5
2024-07-27 22:19:48,999 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.1 pTM=0.545 ipTM=0.371 tol=11.4
2024-07-27 22:21:09,207 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.5 pTM=0.542 ipTM=0.348 tol=9.14
2024-07-27 22:22:29,342 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.9 pTM=0.544 ipTM=0.359 tol=6.08
2024-07-27 22:23:49,718 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.7 pTM=0.511 ipTM=0.243 tol=8.7
2024-07-27 22:25:10,012 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.8 pTM=0.541 ipTM=0.349 tol=7.04
2024-07-27 22:26:30,502 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.9 pTM=0.51 ipTM=0.242 tol=14.9
2024-07-27 22:27:50,792 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60 pTM=0.55 ipTM=0.38 tol=15.8
2024-07-27 22:29:11,168 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.8 pTM=0.512 ipTM=0.244 tol=15.2
2024-07-27 22:30:31,383 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.1 pTM=0.552 ipTM=0.388 tol=13.8
2024-07-27 22:31:51,771 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59 pTM=0.512 ipTM=0.247 tol=13.9
2024-07-27 22:33:11,978 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60 pTM=0.553 ipTM=0.391 tol=15.7
2024-07-27 22:34:32,294 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.6 pTM=0.515 ipTM=0.252 tol=15.1
2024-07-27 22:35:52,470 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.8 pTM=0.548 ipTM=0.374 tol=12.6
2024-07-27 22:37:12,816 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.1 pTM=0.512 ipTM=0.245 tol=13.6
2024-07-27 22:38:32,992 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60 pTM=0.542 ipTM=0.352 tol=13.9
2024-07-27 22:39:53,276 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.8 pTM=0.511 ipTM=0.242 tol=13.4
2024-07-27 22:41:13,431 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.5 pTM=0.54 ipTM=0.352 tol=13.5
2024-07-27 22:42:33,894 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59 pTM=0.512 ipTM=0.245 tol=14.8
2024-07-27 22:43:54,118 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60 pTM=0.551 ipTM=0.382 tol=15.9
2024-07-27 22:45:14,583 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.8 pTM=0.512 ipTM=0.244 tol=14.8
2024-07-27 22:46:34,863 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.8 pTM=0.543 ipTM=0.36 tol=14
2024-07-27 22:47:55,262 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59 pTM=0.511 ipTM=0.24 tol=15.2
2024-07-27 22:49:15,513 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.9 pTM=0.549 ipTM=0.379 tol=15
2024-07-27 22:50:35,874 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.8 pTM=0.512 ipTM=0.242 tol=15.1
2024-07-27 22:51:56,037 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.7 pTM=0.547 ipTM=0.374 tol=14
2024-07-27 22:53:16,322 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.1 pTM=0.512 ipTM=0.241 tol=16.1
2024-07-27 22:54:36,399 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.7 pTM=0.544 ipTM=0.363 tol=13.7
2024-07-27 22:55:56,581 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60 pTM=0.566 ipTM=0.425 tol=6.21
2024-07-27 22:57:16,725 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.2 pTM=0.548 ipTM=0.371 tol=5.13
2024-07-27 22:57:16,727 alphafold2_multimer_v3_model_3_seed_000 took 2488.5s (30 recycles)
2024-07-27 22:58:38,879 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.8 pTM=0.556 ipTM=0.47
2024-07-27 22:59:59,003 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58 pTM=0.58 ipTM=0.492 tol=17.3
2024-07-27 23:01:19,149 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.2 pTM=0.554 ipTM=0.407 tol=9.41
2024-07-27 23:02:39,291 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.8 pTM=0.548 ipTM=0.398 tol=6.04
2024-07-27 23:03:59,453 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.1 pTM=0.524 ipTM=0.307 tol=9.05
2024-07-27 23:05:19,714 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.4 pTM=0.516 ipTM=0.276 tol=7.54
2024-07-27 23:06:39,923 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.5 pTM=0.531 ipTM=0.328 tol=5.48
2024-07-27 23:08:00,223 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.3 pTM=0.508 ipTM=0.251 tol=9.45
2024-07-27 23:09:20,419 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.6 pTM=0.537 ipTM=0.349 tol=10.9
2024-07-27 23:10:40,640 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.3 pTM=0.552 ipTM=0.411 tol=5.62
2024-07-27 23:12:00,845 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.3 pTM=0.535 ipTM=0.343 tol=3.2
2024-07-27 23:13:21,183 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.2 pTM=0.515 ipTM=0.264 tol=6.98
2024-07-27 23:14:41,483 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.9 pTM=0.53 ipTM=0.324 tol=7.02
2024-07-27 23:16:01,822 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.8 pTM=0.522 ipTM=0.319 tol=14.6
2024-07-27 23:17:22,126 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.6 pTM=0.511 ipTM=0.26 tol=8.16
2024-07-27 23:18:42,535 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.3 pTM=0.505 ipTM=0.239 tol=8.07
2024-07-27 23:20:02,820 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.8 pTM=0.551 ipTM=0.435 tol=8.45
2024-07-27 23:21:23,149 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.8 pTM=0.524 ipTM=0.318 tol=4.5
2024-07-27 23:22:43,592 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.8 pTM=0.507 ipTM=0.252 tol=9.92
2024-07-27 23:24:03,965 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.3 pTM=0.54 ipTM=0.393 tol=8.77
2024-07-27 23:25:24,444 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.2 pTM=0.507 ipTM=0.256 tol=5.68
2024-07-27 23:26:44,951 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57 pTM=0.503 ipTM=0.233 tol=6.77
2024-07-27 23:28:05,326 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.8 pTM=0.528 ipTM=0.341 tol=7.33
2024-07-27 23:29:25,877 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.8 pTM=0.494 ipTM=0.206 tol=6.81
2024-07-27 23:30:46,417 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57 pTM=0.499 ipTM=0.222 tol=6.8
2024-07-27 23:32:06,871 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.9 pTM=0.52 ipTM=0.312 tol=9.83
2024-07-27 23:33:27,432 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.8 pTM=0.49 ipTM=0.201 tol=10.5
2024-07-27 23:34:47,943 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.9 pTM=0.494 ipTM=0.208 tol=7.64
2024-07-27 23:36:08,440 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.9 pTM=0.492 ipTM=0.2 tol=7.65
2024-07-27 23:37:28,975 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.7 pTM=0.492 ipTM=0.196 tol=10.4
2024-07-27 23:38:49,504 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.7 pTM=0.498 ipTM=0.221 tol=4.75
2024-07-27 23:38:49,506 alphafold2_multimer_v3_model_4_seed_000 took 2490.7s (30 recycles)
2024-07-27 23:40:11,995 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.7 pTM=0.525 ipTM=0.347
2024-07-27 23:41:32,393 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.1 pTM=0.587 ipTM=0.502 tol=18.8
2024-07-27 23:42:52,758 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.9 pTM=0.543 ipTM=0.351 tol=7.55
2024-07-27 23:44:13,146 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.8 pTM=0.547 ipTM=0.364 tol=13.1
2024-07-27 23:45:33,527 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.3 pTM=0.521 ipTM=0.267 tol=9.12
2024-07-27 23:46:53,954 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.5 pTM=0.527 ipTM=0.293 tol=10.9
2024-07-27 23:48:14,381 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.9 pTM=0.548 ipTM=0.369 tol=5.65
2024-07-27 23:49:34,864 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.9 pTM=0.535 ipTM=0.314 tol=4.11
2024-07-27 23:50:55,362 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.5 pTM=0.516 ipTM=0.233 tol=11.7
2024-07-27 23:52:15,804 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.6 pTM=0.521 ipTM=0.253 tol=8.6
2024-07-27 23:53:36,394 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.7 pTM=0.525 ipTM=0.275 tol=7.38
2024-07-27 23:54:56,828 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.4 pTM=0.56 ipTM=0.4 tol=8.22
2024-07-27 23:56:17,313 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.9 pTM=0.531 ipTM=0.301 tol=6.42
2024-07-27 23:57:37,825 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.1 pTM=0.55 ipTM=0.396 tol=13.9
2024-07-27 23:58:58,295 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.1 pTM=0.53 ipTM=0.302 tol=12.1
2024-07-28 00:00:18,787 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.6 pTM=0.518 ipTM=0.26 tol=13.5
2024-07-28 00:01:39,319 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.8 pTM=0.548 ipTM=0.377 tol=10.9
2024-07-28 00:02:59,790 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.3 pTM=0.546 ipTM=0.364 tol=8.13
2024-07-28 00:04:20,177 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.1 pTM=0.543 ipTM=0.342 tol=4.61
2024-07-28 00:05:40,562 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.2 pTM=0.547 ipTM=0.359 tol=3.86
2024-07-28 00:07:00,913 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59 pTM=0.53 ipTM=0.302 tol=3.49
2024-07-28 00:08:21,457 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.5 pTM=0.514 ipTM=0.231 tol=7.71
2024-07-28 00:09:41,882 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.2 pTM=0.549 ipTM=0.367 tol=9.3
2024-07-28 00:11:02,318 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.3 pTM=0.557 ipTM=0.387 tol=7.16
2024-07-28 00:12:22,737 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59 pTM=0.532 ipTM=0.308 tol=4.5
2024-07-28 00:13:43,243 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.7 pTM=0.527 ipTM=0.287 tol=9.36
2024-07-28 00:15:03,674 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.3 pTM=0.549 ipTM=0.362 tol=8.98
2024-07-28 00:16:24,067 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.9 pTM=0.592 ipTM=0.511 tol=5.41
2024-07-28 00:17:44,414 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.6 pTM=0.564 ipTM=0.419 tol=3.11
2024-07-28 00:19:04,802 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60 pTM=0.592 ipTM=0.506 tol=3.73
2024-07-28 00:20:25,177 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.8 pTM=0.569 ipTM=0.43 tol=3.31
2024-07-28 00:20:25,179 alphafold2_multimer_v3_model_5_seed_000 took 2493.6s (30 recycles)
2024-07-28 00:20:27,262 reranking models by 'multimer' metric
2024-07-28 00:20:31,312 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 00:26:39,616 Relaxation took 372.4s
2024-07-28 00:26:39,616 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.8 pTM=0.569 ipTM=0.43
2024-07-28 00:32:40,437 Relaxation took 360.8s
2024-07-28 00:32:40,445 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.2 pTM=0.548 ipTM=0.371
2024-07-28 00:39:11,766 Relaxation took 391.3s
2024-07-28 00:39:11,766 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.5 pTM=0.532 ipTM=0.32
2024-07-28 00:45:40,236 Relaxation took 388.5s
2024-07-28 00:45:40,236 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.6 pTM=0.506 ipTM=0.252
2024-07-28 00:51:33,724 Relaxation took 353.5s
2024-07-28 00:51:33,725 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.7 pTM=0.498 ipTM=0.221
2024-07-28 00:51:38,179 Done