2024-07-27 20:59:05,789 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 20:59:06,114 Running on GPU
2024-07-27 20:59:09,619 Found 6 citations for tools or databases
2024-07-27 20:59:09,620 Query 1/1: THRA_KLHDC3 (length 872)
2024-07-27 20:59:10,075 Sleeping for 10s. Reason: PENDING
2024-07-27 20:59:20,541 Sleeping for 9s. Reason: RUNNING
2024-07-27 20:59:29,976 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:59:38,417 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:59:44,863 Sleeping for 8s. Reason: RUNNING
2024-07-27 20:59:53,310 Sleeping for 6s. Reason: RUNNING
2024-07-27 20:59:59,742 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:00:06,172 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:00:14,602 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:00:24,025 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:00:34,479 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:00:40,920 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:00:48,349 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:01:00,427 Sleeping for 7s. Reason: PENDING
2024-07-27 21:01:07,859 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:01:14,300 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:01:20,739 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:01:31,182 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:01:41,601 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:01:48,047 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:01:56,504 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:02:07,934 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:02:13,372 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:02:24,907 Setting max_seq=508, max_extra_seq=2048
2024-07-27 21:05:05,253 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.9 pTM=0.482 ipTM=0.158
2024-07-27 21:05:19,853 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.4 pTM=0.483 ipTM=0.169 tol=8.01
2024-07-27 21:05:34,519 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.2 pTM=0.476 ipTM=0.164 tol=9.58
2024-07-27 21:05:49,183 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.6 pTM=0.479 ipTM=0.168 tol=6.82
2024-07-27 21:06:03,850 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69 pTM=0.488 ipTM=0.172 tol=4.5
2024-07-27 21:06:18,529 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.1 pTM=0.489 ipTM=0.17 tol=3.13
2024-07-27 21:06:33,210 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.8 pTM=0.495 ipTM=0.181 tol=3.44
2024-07-27 21:06:47,906 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.6 pTM=0.496 ipTM=0.174 tol=3.66
2024-07-27 21:07:02,609 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.1 pTM=0.503 ipTM=0.192 tol=2.34
2024-07-27 21:07:17,323 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.9 pTM=0.499 ipTM=0.184 tol=2.63
2024-07-27 21:07:31,997 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.2 pTM=0.494 ipTM=0.183 tol=2.08
2024-07-27 21:07:46,649 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.1 pTM=0.497 ipTM=0.184 tol=1.48
2024-07-27 21:08:01,293 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.8 pTM=0.494 ipTM=0.185 tol=1.43
2024-07-27 21:08:15,951 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69 pTM=0.502 ipTM=0.201 tol=1.75
2024-07-27 21:08:30,612 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.1 pTM=0.5 ipTM=0.194 tol=1.57
2024-07-27 21:08:45,278 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.2 pTM=0.502 ipTM=0.194 tol=1.62
2024-07-27 21:08:59,945 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.1 pTM=0.502 ipTM=0.189 tol=2.24
2024-07-27 21:09:14,614 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.1 pTM=0.501 ipTM=0.19 tol=2.03
2024-07-27 21:09:29,291 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.8 pTM=0.5 ipTM=0.189 tol=1.72
2024-07-27 21:09:43,965 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.9 pTM=0.503 ipTM=0.189 tol=2.16
2024-07-27 21:09:58,654 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.5 pTM=0.499 ipTM=0.187 tol=2.12
2024-07-27 21:10:13,360 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69 pTM=0.501 ipTM=0.192 tol=1.94
2024-07-27 21:10:28,056 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.9 pTM=0.502 ipTM=0.202 tol=1.76
2024-07-27 21:10:42,758 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.9 pTM=0.5 ipTM=0.191 tol=2.19
2024-07-27 21:10:57,458 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.9 pTM=0.503 ipTM=0.195 tol=2.14
2024-07-27 21:11:12,158 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.497 ipTM=0.189 tol=2.56
2024-07-27 21:11:26,855 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.9 pTM=0.494 ipTM=0.177 tol=2.3
2024-07-27 21:11:41,556 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.1 pTM=0.497 ipTM=0.191 tol=2.28
2024-07-27 21:11:56,250 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.9 pTM=0.497 ipTM=0.195 tol=2.31
2024-07-27 21:12:10,973 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.1 pTM=0.495 ipTM=0.19 tol=1.59
2024-07-27 21:12:25,711 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.8 pTM=0.495 ipTM=0.181 tol=1.61
2024-07-27 21:12:25,712 alphafold2_multimer_v3_model_1_seed_000 took 584.6s (30 recycles)
2024-07-27 21:12:40,942 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.7 pTM=0.506 ipTM=0.373
2024-07-27 21:12:55,715 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.7 pTM=0.506 ipTM=0.434 tol=6.18
2024-07-27 21:13:10,531 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.2 pTM=0.493 ipTM=0.294 tol=5.72
2024-07-27 21:13:25,311 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.487 ipTM=0.217 tol=5.32
2024-07-27 21:13:40,080 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70 pTM=0.492 ipTM=0.202 tol=3.14
2024-07-27 21:13:54,850 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.2 pTM=0.49 ipTM=0.199 tol=1.97
2024-07-27 21:14:09,597 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.6 pTM=0.497 ipTM=0.216 tol=1.84
2024-07-27 21:14:24,342 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.5 pTM=0.492 ipTM=0.205 tol=1.4
2024-07-27 21:14:39,052 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.8 pTM=0.491 ipTM=0.187 tol=1.54
2024-07-27 21:14:53,761 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.8 pTM=0.491 ipTM=0.187 tol=1.41
2024-07-27 21:15:08,508 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.2 pTM=0.49 ipTM=0.201 tol=1.82
2024-07-27 21:15:23,260 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.1 pTM=0.492 ipTM=0.21 tol=1.65
2024-07-27 21:15:38,011 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.9 pTM=0.488 ipTM=0.186 tol=1.34
2024-07-27 21:15:52,738 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.3 pTM=0.492 ipTM=0.204 tol=1.56
2024-07-27 21:16:07,459 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.2 pTM=0.49 ipTM=0.21 tol=1.71
2024-07-27 21:16:22,181 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.5 pTM=0.492 ipTM=0.215 tol=2.13
2024-07-27 21:16:36,941 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.4 pTM=0.489 ipTM=0.184 tol=2.42
2024-07-27 21:16:51,694 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.2 pTM=0.488 ipTM=0.194 tol=2.06
2024-07-27 21:17:06,451 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.9 pTM=0.496 ipTM=0.206 tol=2.19
2024-07-27 21:17:21,185 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.1 pTM=0.499 ipTM=0.239 tol=1.01
2024-07-27 21:17:35,924 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71 pTM=0.497 ipTM=0.233 tol=2.21
2024-07-27 21:17:50,636 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.4 pTM=0.494 ipTM=0.222 tol=1.93
2024-07-27 21:18:05,347 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.1 pTM=0.49 ipTM=0.183 tol=2.38
2024-07-27 21:18:20,085 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71 pTM=0.492 ipTM=0.197 tol=1.9
2024-07-27 21:18:34,820 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.8 pTM=0.496 ipTM=0.222 tol=1.64
2024-07-27 21:18:49,563 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.2 pTM=0.493 ipTM=0.207 tol=1.18
2024-07-27 21:19:04,285 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.9 pTM=0.493 ipTM=0.203 tol=1.16
2024-07-27 21:19:19,003 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.2 pTM=0.496 ipTM=0.233 tol=0.953
2024-07-27 21:19:33,696 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.9 pTM=0.488 ipTM=0.192 tol=1.6
2024-07-27 21:19:48,410 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.2 pTM=0.488 ipTM=0.189 tol=1.85
2024-07-27 21:20:03,132 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.7 pTM=0.495 ipTM=0.199 tol=2.16
2024-07-27 21:20:03,133 alphafold2_multimer_v3_model_2_seed_000 took 456.9s (30 recycles)
2024-07-27 21:20:18,336 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.7 pTM=0.487 ipTM=0.153
2024-07-27 21:20:33,098 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.6 pTM=0.483 ipTM=0.153 tol=8.03
2024-07-27 21:20:47,852 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.7 pTM=0.483 ipTM=0.162 tol=7.54
2024-07-27 21:21:02,582 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.7 pTM=0.489 ipTM=0.162 tol=3.33
2024-07-27 21:21:17,322 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.2 pTM=0.487 ipTM=0.154 tol=3.94
2024-07-27 21:21:32,048 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.4 pTM=0.495 ipTM=0.174 tol=2.6
2024-07-27 21:21:46,775 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.1 pTM=0.494 ipTM=0.184 tol=2.31
2024-07-27 21:22:01,508 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.1 pTM=0.495 ipTM=0.171 tol=1.67
2024-07-27 21:22:16,220 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.3 pTM=0.505 ipTM=0.2 tol=2.05
2024-07-27 21:22:30,915 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.2 pTM=0.498 ipTM=0.191 tol=1.72
2024-07-27 21:22:45,620 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.499 ipTM=0.189 tol=1.19
2024-07-27 21:23:00,340 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.1 pTM=0.503 ipTM=0.2 tol=1.19
2024-07-27 21:23:15,085 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.2 pTM=0.497 ipTM=0.187 tol=1.23
2024-07-27 21:23:29,839 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.2 pTM=0.504 ipTM=0.201 tol=2.64
2024-07-27 21:23:44,600 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.2 pTM=0.492 ipTM=0.18 tol=1.79
2024-07-27 21:23:59,370 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.4 pTM=0.502 ipTM=0.197 tol=2.53
2024-07-27 21:24:14,130 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.3 pTM=0.493 ipTM=0.185 tol=2.06
2024-07-27 21:24:28,899 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.2 pTM=0.5 ipTM=0.188 tol=1.71
2024-07-27 21:24:43,630 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.2 pTM=0.49 ipTM=0.168 tol=2.03
2024-07-27 21:24:58,336 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.9 pTM=0.501 ipTM=0.193 tol=1.99
2024-07-27 21:25:13,055 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.1 pTM=0.492 ipTM=0.184 tol=2.12
2024-07-27 21:25:27,765 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.2 pTM=0.5 ipTM=0.189 tol=2.46
2024-07-27 21:25:42,465 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.1 pTM=0.49 ipTM=0.171 tol=2.26
2024-07-27 21:25:57,172 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.1 pTM=0.502 ipTM=0.202 tol=2.45
2024-07-27 21:26:11,860 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.1 pTM=0.499 ipTM=0.203 tol=2.04
2024-07-27 21:26:26,570 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.2 pTM=0.5 ipTM=0.186 tol=2.11
2024-07-27 21:26:41,291 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70 pTM=0.49 ipTM=0.174 tol=2.36
2024-07-27 21:26:55,996 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.1 pTM=0.501 ipTM=0.196 tol=2.72
2024-07-27 21:27:10,696 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.1 pTM=0.49 ipTM=0.183 tol=2.98
2024-07-27 21:27:25,419 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.4 pTM=0.501 ipTM=0.199 tol=2.9
2024-07-27 21:27:40,137 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.1 pTM=0.493 ipTM=0.183 tol=3.08
2024-07-27 21:27:40,138 alphafold2_multimer_v3_model_3_seed_000 took 456.5s (30 recycles)
2024-07-27 21:27:55,427 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.2 pTM=0.479 ipTM=0.149
2024-07-27 21:28:10,195 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.4 pTM=0.502 ipTM=0.172 tol=11.6
2024-07-27 21:28:24,971 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70 pTM=0.501 ipTM=0.185 tol=5.66
2024-07-27 21:28:39,758 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.4 pTM=0.51 ipTM=0.219 tol=6.96
2024-07-27 21:28:54,525 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69 pTM=0.518 ipTM=0.24 tol=3.59
2024-07-27 21:29:09,292 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.5 pTM=0.518 ipTM=0.222 tol=4.63
2024-07-27 21:29:24,062 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.3 pTM=0.521 ipTM=0.239 tol=4.93
2024-07-27 21:29:38,811 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.7 pTM=0.516 ipTM=0.218 tol=4.58
2024-07-27 21:29:53,589 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.9 pTM=0.522 ipTM=0.229 tol=3.32
2024-07-27 21:30:08,330 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.8 pTM=0.517 ipTM=0.203 tol=4.04
2024-07-27 21:30:23,091 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.3 pTM=0.524 ipTM=0.213 tol=1.79
2024-07-27 21:30:37,841 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.8 pTM=0.516 ipTM=0.202 tol=2.96
2024-07-27 21:30:52,579 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.2 pTM=0.524 ipTM=0.242 tol=1.89
2024-07-27 21:31:07,308 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.1 pTM=0.522 ipTM=0.224 tol=2.11
2024-07-27 21:31:22,083 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.7 pTM=0.515 ipTM=0.194 tol=4.46
2024-07-27 21:31:36,840 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.9 pTM=0.523 ipTM=0.207 tol=2.65
2024-07-27 21:31:51,595 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.8 pTM=0.54 ipTM=0.296 tol=2.22
2024-07-27 21:32:06,351 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.6 pTM=0.54 ipTM=0.342 tol=4.19
2024-07-27 21:32:21,111 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.7 pTM=0.529 ipTM=0.29 tol=5.46
2024-07-27 21:32:35,840 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.9 pTM=0.53 ipTM=0.274 tol=5.47
2024-07-27 21:32:50,576 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.1 pTM=0.522 ipTM=0.243 tol=2.38
2024-07-27 21:33:05,317 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.1 pTM=0.517 ipTM=0.209 tol=1.88
2024-07-27 21:33:20,074 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.4 pTM=0.522 ipTM=0.219 tol=1.41
2024-07-27 21:33:34,814 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.1 pTM=0.523 ipTM=0.239 tol=1.69
2024-07-27 21:33:49,555 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.4 pTM=0.517 ipTM=0.216 tol=2.19
2024-07-27 21:34:04,272 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.8 pTM=0.516 ipTM=0.194 tol=1.97
2024-07-27 21:34:18,982 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.8 pTM=0.52 ipTM=0.21 tol=2.07
2024-07-27 21:34:33,678 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.7 pTM=0.516 ipTM=0.198 tol=2.42
2024-07-27 21:34:48,389 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.2 pTM=0.516 ipTM=0.199 tol=1.56
2024-07-27 21:35:03,128 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.4 pTM=0.519 ipTM=0.224 tol=2.93
2024-07-27 21:35:17,868 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.4 pTM=0.521 ipTM=0.231 tol=1.28
2024-07-27 21:35:17,868 alphafold2_multimer_v3_model_4_seed_000 took 457.3s (30 recycles)
2024-07-27 21:35:33,136 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.2 pTM=0.5 ipTM=0.222
2024-07-27 21:35:47,966 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.6 pTM=0.478 ipTM=0.141 tol=10.1
2024-07-27 21:36:02,777 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.5 pTM=0.489 ipTM=0.143 tol=9.14
2024-07-27 21:36:17,573 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.5 pTM=0.492 ipTM=0.149 tol=5.67
2024-07-27 21:36:32,380 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.9 pTM=0.497 ipTM=0.156 tol=5.43
2024-07-27 21:36:47,164 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69 pTM=0.503 ipTM=0.168 tol=5.28
2024-07-27 21:37:01,955 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.2 pTM=0.499 ipTM=0.171 tol=4.97
2024-07-27 21:37:16,734 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.2 pTM=0.506 ipTM=0.185 tol=3.28
2024-07-27 21:37:31,512 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.4 pTM=0.502 ipTM=0.177 tol=1.37
2024-07-27 21:37:46,308 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.1 pTM=0.502 ipTM=0.177 tol=1.93
2024-07-27 21:38:01,089 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.2 pTM=0.501 ipTM=0.169 tol=3.25
2024-07-27 21:38:15,863 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.9 pTM=0.5 ipTM=0.164 tol=2.12
2024-07-27 21:38:30,638 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.1 pTM=0.503 ipTM=0.177 tol=3.67
2024-07-27 21:38:45,433 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.9 pTM=0.501 ipTM=0.167 tol=2.91
2024-07-27 21:39:00,195 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.1 pTM=0.505 ipTM=0.172 tol=4.18
2024-07-27 21:39:14,949 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.9 pTM=0.505 ipTM=0.174 tol=5.26
2024-07-27 21:39:29,696 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.9 pTM=0.506 ipTM=0.177 tol=3.8
2024-07-27 21:39:44,451 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.1 pTM=0.509 ipTM=0.18 tol=2.22
2024-07-27 21:39:59,195 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.9 pTM=0.505 ipTM=0.176 tol=2.09
2024-07-27 21:40:13,938 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.9 pTM=0.509 ipTM=0.18 tol=2.06
2024-07-27 21:40:28,697 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.8 pTM=0.504 ipTM=0.174 tol=3.89
2024-07-27 21:40:43,463 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.8 pTM=0.51 ipTM=0.183 tol=3.6
2024-07-27 21:40:58,202 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69 pTM=0.505 ipTM=0.174 tol=3.93
2024-07-27 21:41:12,959 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.9 pTM=0.507 ipTM=0.178 tol=3.1
2024-07-27 21:41:27,711 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.2 pTM=0.505 ipTM=0.173 tol=2.31
2024-07-27 21:41:42,466 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69 pTM=0.504 ipTM=0.172 tol=3.29
2024-07-27 21:41:57,221 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69 pTM=0.505 ipTM=0.173 tol=3.23
2024-07-27 21:42:11,963 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.9 pTM=0.504 ipTM=0.172 tol=2.36
2024-07-27 21:42:26,695 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.9 pTM=0.505 ipTM=0.172 tol=4.25
2024-07-27 21:42:41,439 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.9 pTM=0.502 ipTM=0.174 tol=4.33
2024-07-27 21:42:56,182 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.9 pTM=0.502 ipTM=0.169 tol=3.53
2024-07-27 21:42:56,183 alphafold2_multimer_v3_model_5_seed_000 took 457.8s (30 recycles)
2024-07-27 21:42:56,658 reranking models by 'multimer' metric
2024-07-27 21:43:00,115 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 21:44:16,788 Relaxation took 80.1s
2024-07-27 21:44:16,788 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.4 pTM=0.521 ipTM=0.231
2024-07-27 21:46:02,975 Relaxation took 106.2s
2024-07-27 21:46:02,975 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.7 pTM=0.495 ipTM=0.199
2024-07-27 21:47:55,776 Relaxation took 112.8s
2024-07-27 21:47:55,776 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.1 pTM=0.493 ipTM=0.183
2024-07-27 21:49:51,943 Relaxation took 116.2s
2024-07-27 21:49:51,943 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.8 pTM=0.495 ipTM=0.181
2024-07-27 21:51:25,322 Relaxation took 93.4s
2024-07-27 21:51:25,322 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.9 pTM=0.502 ipTM=0.169
2024-07-27 21:51:28,559 Done