2024-07-27 21:03:22,245 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 21:03:22,571 Running on GPU
2024-07-27 21:03:28,399 Found 6 citations for tools or databases
2024-07-27 21:03:28,399 Query 1/1: THRA_KLHL40 (length 1111)
2024-07-27 21:03:28,843 Sleeping for 9s. Reason: PENDING
2024-07-27 21:03:38,279 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:03:47,951 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:03:57,376 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:04:03,815 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:04:12,253 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:04:18,709 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:04:27,143 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:04:33,573 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:04:41,000 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:04:48,419 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:04:53,880 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:05:01,328 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:05:11,791 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:05:29,429 Sleeping for 10s. Reason: PENDING
2024-07-27 21:05:39,881 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:05:47,343 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:05:53,779 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:06:02,209 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:06:10,653 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:06:19,087 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:06:24,518 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:06:32,967 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:06:43,399 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:06:49,826 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:07:00,437 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:07:07,871 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:07:22,767 Setting max_seq=508, max_extra_seq=2048
2024-07-27 21:10:56,445 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.4 pTM=0.478 ipTM=0.165
2024-07-27 21:11:25,194 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.6 pTM=0.464 ipTM=0.176 tol=11.5
2024-07-27 21:11:54,130 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.7 pTM=0.437 ipTM=0.158 tol=7.26
2024-07-27 21:12:23,243 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69 pTM=0.44 ipTM=0.164 tol=6.36
2024-07-27 21:12:52,401 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.4 pTM=0.444 ipTM=0.168 tol=3.73
2024-07-27 21:13:21,628 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.8 pTM=0.458 ipTM=0.169 tol=2.26
2024-07-27 21:13:50,911 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.1 pTM=0.458 ipTM=0.172 tol=2.32
2024-07-27 21:14:20,200 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.9 pTM=0.46 ipTM=0.168 tol=2.2
2024-07-27 21:14:49,477 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.8 pTM=0.451 ipTM=0.164 tol=2.51
2024-07-27 21:15:18,823 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.7 pTM=0.447 ipTM=0.164 tol=2.96
2024-07-27 21:15:48,175 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.7 pTM=0.443 ipTM=0.164 tol=1.59
2024-07-27 21:16:17,525 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.1 pTM=0.448 ipTM=0.167 tol=2.02
2024-07-27 21:16:46,900 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.4 pTM=0.442 ipTM=0.167 tol=3.31
2024-07-27 21:17:16,297 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.6 pTM=0.439 ipTM=0.16 tol=3.89
2024-07-27 21:17:45,680 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.2 pTM=0.436 ipTM=0.16 tol=3.93
2024-07-27 21:18:15,042 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.3 pTM=0.443 ipTM=0.161 tol=3.35
2024-07-27 21:18:44,412 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69 pTM=0.438 ipTM=0.159 tol=3.19
2024-07-27 21:19:13,776 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.2 pTM=0.443 ipTM=0.166 tol=4.71
2024-07-27 21:19:43,138 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.3 pTM=0.437 ipTM=0.16 tol=3.97
2024-07-27 21:20:12,470 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.3 pTM=0.438 ipTM=0.169 tol=2.98
2024-07-27 21:20:41,798 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.1 pTM=0.443 ipTM=0.168 tol=2.59
2024-07-27 21:21:11,080 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.2 pTM=0.442 ipTM=0.166 tol=2.68
2024-07-27 21:21:40,398 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.2 pTM=0.446 ipTM=0.169 tol=1.72
2024-07-27 21:22:09,682 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.2 pTM=0.447 ipTM=0.165 tol=1.58
2024-07-27 21:22:38,934 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.4 pTM=0.452 ipTM=0.17 tol=1.39
2024-07-27 21:23:08,206 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.447 ipTM=0.163 tol=1.54
2024-07-27 21:23:37,531 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.2 pTM=0.446 ipTM=0.166 tol=1.59
2024-07-27 21:24:06,854 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.1 pTM=0.446 ipTM=0.161 tol=1.33
2024-07-27 21:24:36,167 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.1 pTM=0.452 ipTM=0.172 tol=1.71
2024-07-27 21:25:05,487 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.2 pTM=0.449 ipTM=0.161 tol=1.53
2024-07-27 21:25:34,807 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.4 pTM=0.452 ipTM=0.169 tol=1.56
2024-07-27 21:25:34,808 alphafold2_multimer_v3_model_1_seed_000 took 1084.9s (30 recycles)
2024-07-27 21:26:04,923 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69 pTM=0.507 ipTM=0.177
2024-07-27 21:26:34,289 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.7 pTM=0.487 ipTM=0.164 tol=14
2024-07-27 21:27:03,677 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.4 pTM=0.471 ipTM=0.166 tol=11.5
2024-07-27 21:27:33,066 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.5 pTM=0.464 ipTM=0.161 tol=6.41
2024-07-27 21:28:02,498 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.8 pTM=0.464 ipTM=0.157 tol=4.39
2024-07-27 21:28:31,935 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.6 pTM=0.471 ipTM=0.155 tol=4.53
2024-07-27 21:29:01,388 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.5 pTM=0.478 ipTM=0.16 tol=6.35
2024-07-27 21:29:30,858 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72 pTM=0.479 ipTM=0.157 tol=4.98
2024-07-27 21:30:00,309 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.2 pTM=0.478 ipTM=0.161 tol=2.55
2024-07-27 21:30:29,757 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.9 pTM=0.475 ipTM=0.156 tol=2.51
2024-07-27 21:30:59,223 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.3 pTM=0.475 ipTM=0.159 tol=2.77
2024-07-27 21:31:28,658 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.3 pTM=0.476 ipTM=0.159 tol=3.11
2024-07-27 21:31:58,084 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.9 pTM=0.472 ipTM=0.16 tol=2.87
2024-07-27 21:32:27,519 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.1 pTM=0.474 ipTM=0.156 tol=3.2
2024-07-27 21:32:56,934 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.1 pTM=0.473 ipTM=0.161 tol=2.6
2024-07-27 21:33:26,339 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.2 pTM=0.48 ipTM=0.157 tol=2.71
2024-07-27 21:33:55,715 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72.1 pTM=0.473 ipTM=0.162 tol=2.26
2024-07-27 21:34:25,074 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.1 pTM=0.476 ipTM=0.158 tol=2.9
2024-07-27 21:34:54,450 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.1 pTM=0.473 ipTM=0.161 tol=2.84
2024-07-27 21:35:23,847 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.8 pTM=0.469 ipTM=0.156 tol=1.65
2024-07-27 21:35:53,238 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.2 pTM=0.475 ipTM=0.163 tol=2.19
2024-07-27 21:36:22,616 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.1 pTM=0.472 ipTM=0.157 tol=2.76
2024-07-27 21:36:51,989 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.2 pTM=0.469 ipTM=0.162 tol=2.18
2024-07-27 21:37:21,351 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.469 ipTM=0.157 tol=2.77
2024-07-27 21:37:50,731 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72 pTM=0.471 ipTM=0.162 tol=3.47
2024-07-27 21:38:20,113 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.2 pTM=0.474 ipTM=0.155 tol=2.58
2024-07-27 21:38:49,479 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72 pTM=0.47 ipTM=0.161 tol=2.66
2024-07-27 21:39:18,832 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.9 pTM=0.477 ipTM=0.157 tol=3.01
2024-07-27 21:39:48,202 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.1 pTM=0.478 ipTM=0.161 tol=2.47
2024-07-27 21:40:17,565 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.1 pTM=0.484 ipTM=0.157 tol=2.86
2024-07-27 21:40:46,897 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.1 pTM=0.482 ipTM=0.161 tol=3.13
2024-07-27 21:40:46,898 alphafold2_multimer_v3_model_2_seed_000 took 911.3s (30 recycles)
2024-07-27 21:41:17,006 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.9 pTM=0.46 ipTM=0.155
2024-07-27 21:41:46,439 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.496 ipTM=0.153 tol=10.5
2024-07-27 21:42:15,807 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72 pTM=0.507 ipTM=0.168 tol=18.5
2024-07-27 21:42:45,211 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.7 pTM=0.507 ipTM=0.154 tol=8.57
2024-07-27 21:43:14,551 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.1 pTM=0.503 ipTM=0.154 tol=6.16
2024-07-27 21:43:43,861 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.8 pTM=0.504 ipTM=0.151 tol=6.62
2024-07-27 21:44:13,158 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.9 pTM=0.505 ipTM=0.153 tol=5.33
2024-07-27 21:44:42,454 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.2 pTM=0.508 ipTM=0.161 tol=4.92
2024-07-27 21:45:11,732 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.2 pTM=0.507 ipTM=0.158 tol=7.12
2024-07-27 21:45:41,027 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.1 pTM=0.505 ipTM=0.161 tol=4.13
2024-07-27 21:46:10,367 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.9 pTM=0.512 ipTM=0.161 tol=4.7
2024-07-27 21:46:39,676 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.9 pTM=0.507 ipTM=0.164 tol=4.5
2024-07-27 21:47:09,006 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.8 pTM=0.513 ipTM=0.165 tol=5.42
2024-07-27 21:47:38,316 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.6 pTM=0.507 ipTM=0.157 tol=3.44
2024-07-27 21:48:07,644 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.6 pTM=0.511 ipTM=0.16 tol=3.59
2024-07-27 21:48:36,956 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.6 pTM=0.516 ipTM=0.159 tol=3.93
2024-07-27 21:49:06,300 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.6 pTM=0.515 ipTM=0.165 tol=5.84
2024-07-27 21:49:35,667 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.6 pTM=0.513 ipTM=0.159 tol=5.27
2024-07-27 21:50:05,012 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.4 pTM=0.508 ipTM=0.157 tol=7.18
2024-07-27 21:50:34,299 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.8 pTM=0.514 ipTM=0.169 tol=4.55
2024-07-27 21:51:03,659 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.8 pTM=0.506 ipTM=0.16 tol=4.34
2024-07-27 21:51:33,006 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.9 pTM=0.508 ipTM=0.156 tol=3.91
2024-07-27 21:52:02,354 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.8 pTM=0.508 ipTM=0.16 tol=3.04
2024-07-27 21:52:31,755 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.7 pTM=0.502 ipTM=0.149 tol=4.66
2024-07-27 21:53:01,147 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.3 pTM=0.511 ipTM=0.163 tol=5.27
2024-07-27 21:53:30,528 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.5 pTM=0.508 ipTM=0.155 tol=4.57
2024-07-27 21:53:59,905 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.2 pTM=0.504 ipTM=0.152 tol=4.86
2024-07-27 21:54:29,264 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.1 pTM=0.5 ipTM=0.153 tol=8.08
2024-07-27 21:54:58,642 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.2 pTM=0.503 ipTM=0.152 tol=4.8
2024-07-27 21:55:27,990 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.4 pTM=0.508 ipTM=0.156 tol=4.68
2024-07-27 21:55:57,360 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.6 pTM=0.505 ipTM=0.152 tol=3.66
2024-07-27 21:55:57,361 alphafold2_multimer_v3_model_3_seed_000 took 909.7s (30 recycles)
2024-07-27 21:56:27,422 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.2 pTM=0.505 ipTM=0.194
2024-07-27 21:56:56,795 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.5 pTM=0.49 ipTM=0.151 tol=15
2024-07-27 21:57:26,199 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70 pTM=0.491 ipTM=0.157 tol=9.76
2024-07-27 21:57:55,548 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.8 pTM=0.495 ipTM=0.167 tol=8.7
2024-07-27 21:58:24,870 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.2 pTM=0.506 ipTM=0.174 tol=7.86
2024-07-27 21:58:54,207 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.7 pTM=0.502 ipTM=0.163 tol=5.39
2024-07-27 21:59:23,485 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.3 pTM=0.509 ipTM=0.171 tol=2.91
2024-07-27 21:59:52,777 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.4 pTM=0.511 ipTM=0.167 tol=3.69
2024-07-27 22:00:22,045 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.6 pTM=0.51 ipTM=0.179 tol=4.33
2024-07-27 22:00:51,338 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.9 pTM=0.5 ipTM=0.164 tol=3.42
2024-07-27 22:01:20,663 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.2 pTM=0.499 ipTM=0.166 tol=3.65
2024-07-27 22:01:50,006 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.2 pTM=0.496 ipTM=0.166 tol=2.7
2024-07-27 22:02:19,342 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.1 pTM=0.496 ipTM=0.166 tol=1.76
2024-07-27 22:02:48,675 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.1 pTM=0.492 ipTM=0.164 tol=1.75
2024-07-27 22:03:18,013 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.8 pTM=0.493 ipTM=0.169 tol=3
2024-07-27 22:03:47,378 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.1 pTM=0.499 ipTM=0.169 tol=2.94
2024-07-27 22:04:16,757 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.2 pTM=0.493 ipTM=0.166 tol=2.61
2024-07-27 22:04:46,167 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.2 pTM=0.498 ipTM=0.17 tol=2.66
2024-07-27 22:05:15,575 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.8 pTM=0.494 ipTM=0.17 tol=2.3
2024-07-27 22:05:44,982 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.8 pTM=0.486 ipTM=0.167 tol=2.44
2024-07-27 22:06:14,403 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.4 pTM=0.492 ipTM=0.166 tol=3.07
2024-07-27 22:06:43,820 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.1 pTM=0.491 ipTM=0.17 tol=3.87
2024-07-27 22:07:13,242 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69 pTM=0.486 ipTM=0.164 tol=3.4
2024-07-27 22:07:42,637 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.1 pTM=0.485 ipTM=0.166 tol=4.11
2024-07-27 22:08:12,020 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.2 pTM=0.485 ipTM=0.164 tol=3.91
2024-07-27 22:08:41,401 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.5 pTM=0.486 ipTM=0.173 tol=4.16
2024-07-27 22:09:10,784 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.9 pTM=0.484 ipTM=0.168 tol=4.44
2024-07-27 22:09:40,165 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.4 pTM=0.485 ipTM=0.168 tol=3.32
2024-07-27 22:10:09,520 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.8 pTM=0.483 ipTM=0.161 tol=3.13
2024-07-27 22:10:38,848 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.8 pTM=0.488 ipTM=0.169 tol=4.94
2024-07-27 22:11:08,180 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.9 pTM=0.486 ipTM=0.175 tol=2.81
2024-07-27 22:11:08,181 alphafold2_multimer_v3_model_4_seed_000 took 910.1s (30 recycles)
2024-07-27 22:11:38,247 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.4 pTM=0.473 ipTM=0.509
2024-07-27 22:12:07,651 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.4 pTM=0.475 ipTM=0.172 tol=7.84
2024-07-27 22:12:37,124 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.7 pTM=0.477 ipTM=0.16 tol=10.1
2024-07-27 22:13:06,574 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.8 pTM=0.504 ipTM=0.209 tol=4.86
2024-07-27 22:13:36,047 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.9 pTM=0.497 ipTM=0.158 tol=4.21
2024-07-27 22:14:05,533 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.9 pTM=0.5 ipTM=0.16 tol=4.73
2024-07-27 22:14:35,038 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71 pTM=0.5 ipTM=0.159 tol=7.22
2024-07-27 22:15:04,514 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.1 pTM=0.503 ipTM=0.157 tol=4.05
2024-07-27 22:15:33,982 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.8 pTM=0.503 ipTM=0.164 tol=3.31
2024-07-27 22:16:03,418 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71 pTM=0.498 ipTM=0.158 tol=3.13
2024-07-27 22:16:32,834 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71 pTM=0.498 ipTM=0.167 tol=2.64
2024-07-27 22:17:02,285 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.1 pTM=0.498 ipTM=0.161 tol=3.37
2024-07-27 22:17:31,735 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71 pTM=0.504 ipTM=0.168 tol=2.8
2024-07-27 22:18:01,206 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.1 pTM=0.5 ipTM=0.162 tol=2.12
2024-07-27 22:18:30,665 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71 pTM=0.497 ipTM=0.162 tol=2.48
2024-07-27 22:19:00,117 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71 pTM=0.503 ipTM=0.161 tol=1.91
2024-07-27 22:19:29,555 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.8 pTM=0.497 ipTM=0.161 tol=2.14
2024-07-27 22:19:58,971 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.1 pTM=0.499 ipTM=0.159 tol=4.33
2024-07-27 22:20:28,389 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71 pTM=0.496 ipTM=0.156 tol=3.14
2024-07-27 22:20:57,821 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.8 pTM=0.492 ipTM=0.156 tol=3.53
2024-07-27 22:21:27,259 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.1 pTM=0.502 ipTM=0.158 tol=3.48
2024-07-27 22:21:56,679 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.8 pTM=0.492 ipTM=0.156 tol=5.51
2024-07-27 22:22:26,055 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.8 pTM=0.493 ipTM=0.158 tol=5.58
2024-07-27 22:22:55,449 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.8 pTM=0.491 ipTM=0.155 tol=4.26
2024-07-27 22:23:24,858 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.9 pTM=0.497 ipTM=0.158 tol=4.59
2024-07-27 22:23:54,272 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.7 pTM=0.496 ipTM=0.161 tol=6.4
2024-07-27 22:24:23,697 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.7 pTM=0.493 ipTM=0.16 tol=6.79
2024-07-27 22:24:53,143 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.8 pTM=0.492 ipTM=0.155 tol=5.55
2024-07-27 22:25:22,591 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.9 pTM=0.496 ipTM=0.162 tol=4.03
2024-07-27 22:25:52,002 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.8 pTM=0.494 ipTM=0.162 tol=3.55
2024-07-27 22:26:21,433 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.9 pTM=0.494 ipTM=0.155 tol=2.56
2024-07-27 22:26:21,434 alphafold2_multimer_v3_model_5_seed_000 took 912.5s (30 recycles)
2024-07-27 22:26:22,181 reranking models by 'multimer' metric
2024-07-27 22:26:25,405 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 22:28:34,827 Relaxation took 132.6s
2024-07-27 22:28:34,827 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.9 pTM=0.486 ipTM=0.175
2024-07-27 22:30:09,239 Relaxation took 94.4s
2024-07-27 22:30:09,239 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.4 pTM=0.452 ipTM=0.169
2024-07-27 22:32:01,555 Relaxation took 112.3s
2024-07-27 22:32:01,555 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.1 pTM=0.482 ipTM=0.161
2024-07-27 22:33:15,625 Relaxation took 74.1s
2024-07-27 22:33:15,625 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.9 pTM=0.494 ipTM=0.155
2024-07-27 22:35:13,337 Relaxation took 117.7s
2024-07-27 22:35:13,337 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.6 pTM=0.505 ipTM=0.152
2024-07-27 22:35:15,784 Done